RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 PLA2G4AP47712 749 aa7.53□□□□□ -1.2
PCM1-214ENST00000521338 TBC1D9Q6ZT07 1266 aa7.53□□□□□ -1.2
PCM1-214ENST00000521338 C1orf216Q8TAB5 229 aa7.53□□□□□ -1.2
PCM1-214ENST00000521338 TRIM11Q96F44 468 aa7.53□□□□□ -1.2
PCM1-214ENST00000521338 NOP53Q9NZM5 478 aaKnown RBP7.53□□□□□ -1.2
PCM1-214ENST00000521338 DOLKQ9UPQ8 538 aa7.53□□□□□ -1.2
PCM1-214ENST00000521338 KRTAP9-6A0A140TA67 174 aa7.52□□□□□ -1.21
PCM1-214ENST00000521338 ATXN7O15265 892 aaPredicted RBP7.52□□□□□ -1.21
PCM1-214ENST00000521338 INHAP05111 366 aa7.52□□□□□ -1.21
PCM1-214ENST00000521338 DOC2BQ14184 412 aa7.52□□□□□ -1.21
PCM1-214ENST00000521338 AVENQ9NQS1 362 aaPredicted RBP7.52□□□□□ -1.21
PCM1-214ENST00000521338 CD33P20138 364 aa7.51□□□□□ -1.21
PCM1-214ENST00000521338 ADH6P28332 368 aa7.51□□□□□ -1.21
PCM1-214ENST00000521338 IRF5Q13568 498 aa7.51□□□□□ -1.21
PCM1-214ENST00000521338 A0A1W2PNR3 127 aa7.5□□□□□ -1.21
PCM1-214ENST00000521338 GDF10P55107 478 aa7.5□□□□□ -1.21
PCM1-214ENST00000521338 NEUROD2Q15784 382 aa7.5□□□□□ -1.21
PCM1-214ENST00000521338 NIFKQ9BYG3 293 aaKnown RBP7.5□□□□□ -1.21
PCM1-214ENST00000521338 SEMA6BQ9H3T3 888 aa7.5□□□□□ -1.21
PCM1-214ENST00000521338 TBC1D2BQ9UPU7 963 aa7.5□□□□□ -1.21
PCM1-214ENST00000521338 DCDC2BA2VCK2 349 aa7.49□□□□□ -1.21
PCM1-214ENST00000521338 SMTNP53814 917 aa7.49□□□□□ -1.21
PCM1-214ENST00000521338 OXLD1Q5BKU9 147 aa7.49□□□□□ -1.21
PCM1-214ENST00000521338 MDFIQ99750 246 aa7.49□□□□□ -1.21
PCM1-214ENST00000521338 IQSEC3Q9UPP2 1182 aaPredicted RBP7.49□□□□□ -1.21
PCM1-214ENST00000521338 APBB1O00213 710 aa7.48□□□□□ -1.21
PCM1-214ENST00000521338 EIF4G2P78344 907 aaKnown RBP eCLIP7.48□□□□□ -1.21
PCM1-214ENST00000521338 MTFR1Q15390 333 aa7.48□□□□□ -1.21
PCM1-214ENST00000521338 SLFNL1Q499Z3 407 aa7.48□□□□□ -1.21
PCM1-214ENST00000521338 ZNF468Q5VIY5 522 aaPredicted RBP7.48□□□□□ -1.21
PCM1-214ENST00000521338 AIDAQ96BJ3 306 aa7.48□□□□□ -1.21
PCM1-214ENST00000521338 SLC4A9Q96Q91 983 aa7.48□□□□□ -1.21
PCM1-214ENST00000521338 ZIC5Q96T25 663 aa7.48□□□□□ -1.21
PCM1-214ENST00000521338 PLVAPQ9BX97 442 aa7.48□□□□□ -1.21
PCM1-214ENST00000521338 STRN4Q9NRL3 753 aa7.48□□□□□ -1.21
PCM1-214ENST00000521338 USP3Q9Y6I4 520 aa7.48□□□□□ -1.21
PCM1-214ENST00000521338 TMEM229AB2RXF0 380 aa7.47□□□□□ -1.21
PCM1-214ENST00000521338 FAM157BP0CG42 384 aa7.47□□□□□ -1.21
PCM1-214ENST00000521338 PCBP4P57723 403 aaKnown RBP7.47□□□□□ -1.21
PCM1-214ENST00000521338 FOXD4L6Q3SYB3 417 aaPredicted RBP7.47□□□□□ -1.21
PCM1-214ENST00000521338 FOXD4L3Q6VB84 417 aaPredicted RBP7.47□□□□□ -1.21
PCM1-214ENST00000521338 SIRT1Q96EB6 747 aa7.47□□□□□ -1.21
PCM1-214ENST00000521338 CDK2AP1O14519 115 aa7.46□□□□□ -1.22
PCM1-214ENST00000521338 KHNYNO15037 678 aaKnown RBP7.46□□□□□ -1.22
PCM1-214ENST00000521338 EFSO43281 561 aa7.46□□□□□ -1.22
PCM1-214ENST00000521338 GATA4P43694 442 aa7.46□□□□□ -1.22
PCM1-214ENST00000521338 RSPO4Q2I0M5 234 aaPredicted RBP7.46□□□□□ -1.22
PCM1-214ENST00000521338 ZDHHC3Q9NYG2 299 aa7.46□□□□□ -1.22
PCM1-214ENST00000521338 SPATA31C1P0DKV0 1188 aa7.45□□□□□ -1.22
PCM1-214ENST00000521338 ARSJQ5FYB0 599 aaPredicted RBP7.45□□□□□ -1.22
PCM1-214ENST00000521338 NKAPLQ5M9Q1 402 aa7.45□□□□□ -1.22
PCM1-214ENST00000521338 SAMD5Q5TGI4 173 aa7.45□□□□□ -1.22
PCM1-214ENST00000521338 BRPF1P55201 1214 aaPredicted RBP7.44□□□□□ -1.22
PCM1-214ENST00000521338 COL9A3Q14050 684 aaPredicted RBP7.44□□□□□ -1.22
PCM1-214ENST00000521338 ZMYM1Q5SVZ6 1142 aa7.44□□□□□ -1.22
PCM1-214ENST00000521338 SERTAD1Q9UHV2 236 aa7.44□□□□□ -1.22
PCM1-214ENST00000521338 A6NJY4 79 aa7.43□□□□□ -1.22
PCM1-214ENST00000521338 NBPF1Q3BBV0 1214 aa7.43□□□□□ -1.22
PCM1-214ENST00000521338 MAP7D1Q3KQU3 841 aa7.43□□□□□ -1.22
PCM1-214ENST00000521338 MARK1Q9P0L2 795 aa7.43□□□□□ -1.22
PCM1-214ENST00000521338 ELOA3CA0A087WX78 387 aaPredicted RBP7.42□□□□□ -1.22
PCM1-214ENST00000521338 ELOA3DA6NLF2 546 aaPredicted RBP7.42□□□□□ -1.22
PCM1-214ENST00000521338 LAMC2Q13753 1193 aa7.42□□□□□ -1.22
PCM1-214ENST00000521338 ELOA3BQ3SY89 546 aa7.42□□□□□ -1.22
PCM1-214ENST00000521338 PLPP7Q8NBV4 271 aa7.42□□□□□ -1.22
PCM1-214ENST00000521338 ELOA3Q8NG57 546 aa7.42□□□□□ -1.22
PCM1-214ENST00000521338 C7orf43Q8WVR3 580 aa7.42□□□□□ -1.22
PCM1-214ENST00000521338 PRR12Q9ULL5 1215 aa7.42□□□□□ -1.22
PCM1-214ENST00000521338 PCDHGA11Q9Y5H2 935 aa7.42□□□□□ -1.22
PCM1-214ENST00000521338 TATP17735 454 aaPredicted RBP7.41□□□□□ -1.22
PCM1-214ENST00000521338 VAC14Q08AM6 782 aa7.41□□□□□ -1.22
PCM1-214ENST00000521338 TPSG1Q9NRR2 321 aa7.41□□□□□ -1.22
PCM1-214ENST00000521338 TXLNAP40222 546 aa7.4□□□□□ -1.22
PCM1-214ENST00000521338 SYT9Q86SS6 491 aa7.4□□□□□ -1.22
PCM1-214ENST00000521338 ZDHHC1Q8WTX9 485 aa7.4□□□□□ -1.22
PCM1-214ENST00000521338 BCANQ96GW7 911 aa7.4□□□□□ -1.22
PCM1-214ENST00000521338 CABP1Q9NZU7 370 aa7.4□□□□□ -1.22
PCM1-214ENST00000521338 STARD13Q9Y3M8 1113 aa7.4□□□□□ -1.22
PCM1-214ENST00000521338 PARP3Q9Y6F1 533 aa7.4□□□□□ -1.22
PCM1-214ENST00000521338 ADARB2-AS1A8MUL3 147 aa7.39□□□□□ -1.23
PCM1-214ENST00000521338 DYRK3O43781 588 aa7.38□□□□□ -1.23
PCM1-214ENST00000521338 SIN3BO75182 1162 aa7.38□□□□□ -1.23
PCM1-214ENST00000521338 PRDM6Q9NQX0 595 aa7.38□□□□□ -1.23
PCM1-214ENST00000521338 SCHIP1Q9P0W5 487 aaPredicted RBP7.38□□□□□ -1.23
PCM1-214ENST00000521338 EML1O00423 815 aa7.37□□□□□ -1.23
PCM1-214ENST00000521338 ALAS2P22557 587 aa7.37□□□□□ -1.23
PCM1-214ENST00000521338 KRTAP1-3Q8IUG1 177 aa7.37□□□□□ -1.23
PCM1-214ENST00000521338 TNFRSF25Q93038 417 aa7.37□□□□□ -1.23
PCM1-214ENST00000521338 GJA3Q9Y6H8 435 aa7.37□□□□□ -1.23
PCM1-214ENST00000521338 FAM229AH3BQW9 127 aa7.36□□□□□ -1.23
PCM1-214ENST00000521338 EPHA4P54764 986 aa7.36□□□□□ -1.23
PCM1-214ENST00000521338 BICDL1Q6ZP65 573 aa7.36□□□□□ -1.23
PCM1-214ENST00000521338 C8orf86Q6ZUL3 223 aa7.36□□□□□ -1.23
PCM1-214ENST00000521338 MICALL1Q8N3F8 863 aa7.36□□□□□ -1.23
PCM1-214ENST00000521338 SLC30A3Q99726 388 aa7.36□□□□□ -1.23
PCM1-214ENST00000521338 KRTAP4-12Q9BQ66 201 aa7.36□□□□□ -1.23
PCM1-214ENST00000521338 PRM3Q9NNZ6 103 aa7.36□□□□□ -1.23
PCM1-214ENST00000521338 SPDYE3A6NKU9 549 aa7.35□□□□□ -1.23
PCM1-214ENST00000521338 M0R082 166 aa7.35□□□□□ -1.23
PCM1-214ENST00000521338 PIK3CDO00329 1044 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms