RNA–Protein interactions for RNA: ENST00000521263.1

C1orf198-205, Transcript of chromosome 1 open reading frame 198, humanhuman

TSL 3

Gene C1orf198, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf198-205ENST00000521263 WDR43Q15061 677 aaKnown RBP eCLIP38.57■■■■□ 3.76
C1orf198-205ENST00000521263 ZBTB1Q9Y2K1 713 aa38.57■■■■□ 3.76
C1orf198-205ENST00000521263 PNISRQ8TF01 805 aaKnown RBP38.55■■■■□ 3.76
C1orf198-205ENST00000521263 COL15A1P39059 1388 aa38.55■■■■□ 3.76
C1orf198-205ENST00000521263 ZNF316A6NFI3 1004 aaPredicted RBP38.54■■■■□ 3.76
C1orf198-205ENST00000521263 PARP3Q9Y6F1 533 aa38.54■■■■□ 3.76
C1orf198-205ENST00000521263 KCNQ3O43525 872 aa38.53■■■■□ 3.76
C1orf198-205ENST00000521263 SRP68Q9UHB9 627 aaKnown RBP38.53■■■■□ 3.76
C1orf198-205ENST00000521263 A0A087WZG4 1122 aa38.52■■■■□ 3.76
C1orf198-205ENST00000521263 CANXP27824 592 aaKnown RBP38.52■■■■□ 3.76
C1orf198-205ENST00000521263 PELP1Q8IZL8 1130 aaKnown RBP38.52■■■■□ 3.76
C1orf198-205ENST00000521263 YY1P25490 414 aa38.51■■■■□ 3.76
C1orf198-205ENST00000521263 NARFQ9UHQ1 456 aa38.51■■■■□ 3.76
C1orf198-205ENST00000521263 SNRPA1P09661 255 aaKnown RBP38.5■■■■□ 3.75
C1orf198-205ENST00000521263 LMOD3Q0VAK6 560 aa38.49■■■■□ 3.75
C1orf198-205ENST00000521263 NPM2Q86SE8 214 aaKnown RBP38.49■■■■□ 3.75
C1orf198-205ENST00000521263 FKBP8Q14318 412 aa38.48■■■■□ 3.75
C1orf198-205ENST00000521263 EIF5P55010 431 aaKnown RBP38.47■■■■□ 3.75
C1orf198-205ENST00000521263 USPL1Q5W0Q7 1092 aa38.47■■■■□ 3.75
C1orf198-205ENST00000521263 GRIN3BO60391 1043 aa38.46■■■■□ 3.75
C1orf198-205ENST00000521263 IL6STP40189 918 aaPredicted RBP38.46■■■■□ 3.75
C1orf198-205ENST00000521263 RIPK4P57078 832 aa38.46■■■■□ 3.75
C1orf198-205ENST00000521263 KIF13BQ9NQT8 1826 aa38.44■■■■□ 3.74
C1orf198-205ENST00000521263 CHD4Q14839 1912 aa38.44■■■■□ 3.74
C1orf198-205ENST00000521263 TMPOP42166 694 aaKnown RBP38.43■■■■□ 3.74
C1orf198-205ENST00000521263 RUNDC1Q96C34 613 aa38.43■■■■□ 3.74
C1orf198-205ENST00000521263 TGFB2P61812 414 aa38.42■■■■□ 3.74
C1orf198-205ENST00000521263 C10orf71Q711Q0 1435 aa38.42■■■■□ 3.74
C1orf198-205ENST00000521263 A1BGP04217 495 aa38.4■■■■□ 3.74
C1orf198-205ENST00000521263 TM4SF1P30408 202 aa38.4■■■■□ 3.74
C1orf198-205ENST00000521263 MIS18AQ9NYP9 233 aa38.4■■■■□ 3.74
C1orf198-205ENST00000521263 USP16Q9Y5T5 823 aa38.4■■■■□ 3.74
C1orf198-205ENST00000521263 KDM3BQ7LBC6 1761 aa38.39■■■■□ 3.74
C1orf198-205ENST00000521263 THUMPD2Q9BTF0 503 aaKnown RBP38.39■■■■□ 3.74
C1orf198-205ENST00000521263 ADAMTS8Q9UP79 889 aa38.39■■■■□ 3.74
C1orf198-205ENST00000521263 ZNF330Q9Y3S2 320 aaPredicted RBP38.39■■■■□ 3.74
C1orf198-205ENST00000521263 CCDC146Q8IYE0 955 aa38.38■■■■□ 3.73
C1orf198-205ENST00000521263 YBX3P16989 372 aaKnown RBP eCLIP38.37■■■■□ 3.73
C1orf198-205ENST00000521263 DDR1Q08345 913 aa38.36■■■■□ 3.73
C1orf198-205ENST00000521263 BABAM1Q9NWV8 329 aa38.36■■■■□ 3.73
C1orf198-205ENST00000521263 POLRMTO00411 1230 aaKnown RBP38.35■■■■□ 3.73
C1orf198-205ENST00000521263 UTRNP46939 3433 aa38.34■■■■□ 3.73
C1orf198-205ENST00000521263 PRAMEF22A3QJZ6 481 aa38.33■■■■□ 3.73
C1orf198-205ENST00000521263 NFIXQ14938 502 aa38.33■■■■□ 3.73
C1orf198-205ENST00000521263 BCL2L12Q9HB09 334 aa38.33■■■■□ 3.73
C1orf198-205ENST00000521263 PXDNLA1KZ92 1463 aa38.32■■■■□ 3.72
C1orf198-205ENST00000521263 EIF4A1P60842 406 aaKnown RBP38.31■■■■□ 3.72
C1orf198-205ENST00000521263 TSPYL4Q9UJ04 414 aa38.31■■■■□ 3.72
C1orf198-205ENST00000521263 TBC1D2BQ9UPU7 963 aa38.31■■■■□ 3.72
C1orf198-205ENST00000521263 LAMB4A4D0S4 1761 aa38.31■■■■□ 3.72
C1orf198-205ENST00000521263 GOLGB1Q14789 3259 aaKnown RBP38.3■■■■□ 3.72
C1orf198-205ENST00000521263 SCN7AQ01118 1682 aa38.3■■■■□ 3.72
C1orf198-205ENST00000521263 NEUROD2Q15784 382 aa38.3■■■■□ 3.72
C1orf198-205ENST00000521263 RRP7AQ9Y3A4 280 aaKnown RBP38.3■■■■□ 3.72
C1orf198-205ENST00000521263 GIGYF1O75420 1035 aaPredicted RBP38.29■■■■□ 3.72
C1orf198-205ENST00000521263 ANP32CO43423 234 aa38.28■■■■□ 3.72
C1orf198-205ENST00000521263 DZIP3Q86Y13 1208 aaKnown RBP38.28■■■■□ 3.72
C1orf198-205ENST00000521263 KIAA1551Q9HCM1 1747 aa38.26■■■■□ 3.72
C1orf198-205ENST00000521263 N4BP2Q86UW6 1770 aaPredicted RBP38.26■■■■□ 3.71
C1orf198-205ENST00000521263 A0A0G2JLW4 131 aa38.25■■■■□ 3.71
C1orf198-205ENST00000521263 SERPINB2P05120 415 aa38.25■■■■□ 3.71
C1orf198-205ENST00000521263 CAMTA2O94983 1202 aa38.24■■■■□ 3.71
C1orf198-205ENST00000521263 DPEP1P16444 411 aa38.24■■■■□ 3.71
C1orf198-205ENST00000521263 ZNF652Q9Y2D9 606 aa38.23■■■■□ 3.71
C1orf198-205ENST00000521263 NRXN2Q9P2S2 1712 aa38.23■■■■□ 3.71
C1orf198-205ENST00000521263 AFDNP55196 1824 aaKnown RBP38.22■■■■□ 3.71
C1orf198-205ENST00000521263 RGL2O15211 777 aa38.22■■■■□ 3.71
C1orf198-205ENST00000521263 PIP4K2AP48426 406 aaPredicted RBP38.22■■■■□ 3.71
C1orf198-205ENST00000521263 BICDL1Q6ZP65 573 aa38.22■■■■□ 3.71
C1orf198-205ENST00000521263 NBPF26B4DH59 902 aa38.21■■■■□ 3.71
C1orf198-205ENST00000521263 TBC1D9BQ66K14 1250 aa38.21■■■■□ 3.71
C1orf198-205ENST00000521263 NBPF10Q6P3W6 841 aaKnown RBP38.21■■■■□ 3.71
C1orf198-205ENST00000521263 CLEC4GQ6UXB4 293 aa38.21■■■■□ 3.71
C1orf198-205ENST00000521263 NBPF15Q8N660 670 aa38.21■■■■□ 3.71
C1orf198-205ENST00000521263 WWC3Q9ULE0 1092 aa38.21■■■■□ 3.71
C1orf198-205ENST00000521263 TRIM35Q9UPQ4 493 aa38.21■■■■□ 3.71
C1orf198-205ENST00000521263 BCORQ6W2J9 1755 aa38.21■■■■□ 3.71
C1orf198-205ENST00000521263 CARMIL3Q8ND23 1372 aa38.2■■■■□ 3.71
C1orf198-205ENST00000521263 SETDB2Q96T68 719 aa38.19■■■■□ 3.7
C1orf198-205ENST00000521263 PIM2Q9P1W9 311 aa38.18■■■■□ 3.7
C1orf198-205ENST00000521263 BCS1LQ9Y276 419 aa38.18■■■■□ 3.7
C1orf198-205ENST00000521263 ERBB4Q15303 1308 aa38.17■■■■□ 3.7
C1orf198-205ENST00000521263 BRCA1P38398 1863 aaKnown RBP38.15■■■■□ 3.7
C1orf198-205ENST00000521263 CHL1O00533 1208 aa38.14■■■■□ 3.7
C1orf198-205ENST00000521263 APAF1O14727 1248 aa38.14■■■■□ 3.7
C1orf198-205ENST00000521263 KCNA3P22001 575 aa38.14■■■■□ 3.7
C1orf198-205ENST00000521263 CALD1Q05682 793 aaKnown RBP38.13■■■■□ 3.69
C1orf198-205ENST00000521263 PDZRN3Q9UPQ7 1066 aa38.12■■■■□ 3.69
C1orf198-205ENST00000521263 LAS1LQ9Y4W2 734 aaKnown RBP38.12■■■■□ 3.69
C1orf198-205ENST00000521263 DALRD3Q5D0E6 543 aaKnown RBP38.11■■■■□ 3.69
C1orf198-205ENST00000521263 ZNF784Q8NCA9 323 aaPredicted RBP38.11■■■■□ 3.69
C1orf198-205ENST00000521263 NPHP1O15259 732 aa38.1■■■■□ 3.69
C1orf198-205ENST00000521263 CHRNA5P30532 468 aa38.09■■■■□ 3.69
C1orf198-205ENST00000521263 MRS2Q9HD23 443 aa38.09■■■■□ 3.69
C1orf198-205ENST00000521263 CCDC184Q52MB2 194 aa38.08■■■■□ 3.69
C1orf198-205ENST00000521263 KIF6Q6ZMV9 814 aa38.08■■■■□ 3.69
C1orf198-205ENST00000521263 CNBD1Q8NA66 436 aa38.08■■■■□ 3.69
C1orf198-205ENST00000521263 CFAP44Q96MT7 982 aa38.08■■■■□ 3.69
C1orf198-205ENST00000521263 ERVV-1B6SEH8 477 aa38.07■■■■□ 3.68
C1orf198-205ENST00000521263 BRIP1Q9BX63 1249 aa38.07■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms