RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 USP17L12C9JPN9 530 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 USP17L11C9JVI0 530 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 USP17L21D6R901 530 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 USP17L18D6R9N7 530 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 USP17L22D6RA61 530 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 USP17L17D6RBQ6 530 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 USP17L19D6RCP7 530 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 USP17L20D6RJB6 530 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 LGR5O75473 907 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 CSB-PGBD3P0DP91 1061 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 FOXK2Q01167 660 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 USP17L24Q0WX57 530 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 DPYDQ12882 1025 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 PGBD3Q8N328 593 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 GMCL1Q96IK5 515 aa9.74□□□□□ -0.85
PTPN12-214ENST00000520947 THBS1P07996 1170 aa9.73□□□□□ -0.85
PTPN12-214ENST00000520947 SEC13P55735 322 aa9.73□□□□□ -0.85
PTPN12-214ENST00000520947 FOXR1Q6PIV2 292 aa9.73□□□□□ -0.85
PTPN12-214ENST00000520947 ZDHHC1Q8WTX9 485 aa9.73□□□□□ -0.85
PTPN12-214ENST00000520947 TSPAN10Q9H1Z9 355 aaPredicted RBP9.73□□□□□ -0.85
PTPN12-214ENST00000520947 FAM196BA6NMK8 535 aa9.72□□□□□ -0.85
PTPN12-214ENST00000520947 NBPF1Q3BBV0 1214 aa9.72□□□□□ -0.85
PTPN12-214ENST00000520947 CCDC97Q96F63 343 aaPredicted RBP9.72□□□□□ -0.85
PTPN12-214ENST00000520947 ZNF232Q9UNY5 417 aa9.72□□□□□ -0.85
PTPN12-214ENST00000520947 M0R2N6 131 aa9.71□□□□□ -0.86
PTPN12-214ENST00000520947 ATP4AP20648 1035 aa9.71□□□□□ -0.86
PTPN12-214ENST00000520947 GAS6Q14393 721 aa9.71□□□□□ -0.86
PTPN12-214ENST00000520947 ANKMY2Q8IV38 441 aa9.71□□□□□ -0.86
PTPN12-214ENST00000520947 L3MBTL2Q969R5 705 aa9.71□□□□□ -0.86
PTPN12-214ENST00000520947 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.86
PTPN12-214ENST00000520947 HINFPQ9BQA5 517 aa9.71□□□□□ -0.86
PTPN12-214ENST00000520947 TATP17735 454 aaPredicted RBP9.7□□□□□ -0.86
PTPN12-214ENST00000520947 NOS2P35228 1153 aa9.7□□□□□ -0.86
PTPN12-214ENST00000520947 TXLNAP40222 546 aa9.7□□□□□ -0.86
PTPN12-214ENST00000520947 ARSJQ5FYB0 599 aaPredicted RBP9.7□□□□□ -0.86
PTPN12-214ENST00000520947 EFHC2Q5JST6 749 aa9.7□□□□□ -0.86
PTPN12-214ENST00000520947 SH3PXD2AQ5TCZ1 1133 aa9.7□□□□□ -0.86
PTPN12-214ENST00000520947 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.69□□□□□ -0.86
PTPN12-214ENST00000520947 TEAD4Q15561 434 aa9.69□□□□□ -0.86
PTPN12-214ENST00000520947 SERTM1A2A2V5 107 aa9.68□□□□□ -0.86
PTPN12-214ENST00000520947 PPP1R12BO60237 982 aaPredicted RBP9.68□□□□□ -0.86
PTPN12-214ENST00000520947 GAS2L2Q8NHY3 880 aa9.68□□□□□ -0.86
PTPN12-214ENST00000520947 C1orf216Q8TAB5 229 aa9.68□□□□□ -0.86
PTPN12-214ENST00000520947 ARXQ96QS3 562 aa9.68□□□□□ -0.86
PTPN12-214ENST00000520947 CRISPLD1Q9H336 500 aa9.68□□□□□ -0.86
PTPN12-214ENST00000520947 ZDHHC3Q9NYG2 299 aa9.68□□□□□ -0.86
PTPN12-214ENST00000520947 SERPINA10Q9UK55 444 aa9.68□□□□□ -0.86
PTPN12-214ENST00000520947 A0A1W2PNR3 127 aa9.67□□□□□ -0.86
PTPN12-214ENST00000520947 PSMA6P60900 246 aaKnown RBP9.67□□□□□ -0.86
PTPN12-214ENST00000520947 BICDL1Q6ZP65 573 aa9.67□□□□□ -0.86
PTPN12-214ENST00000520947 CHMP7Q8WUX9 453 aaPredicted RBP9.67□□□□□ -0.86
PTPN12-214ENST00000520947 SCG3Q8WXD2 468 aaKnown RBP9.67□□□□□ -0.86
PTPN12-214ENST00000520947 CHMP3Q9Y3E7 222 aa9.67□□□□□ -0.86
PTPN12-214ENST00000520947 EML1O00423 815 aa9.66□□□□□ -0.86
PTPN12-214ENST00000520947 C21orf2O43822 256 aa9.66□□□□□ -0.86
PTPN12-214ENST00000520947 UBAP2LQ14157 1087 aaKnown RBP9.66□□□□□ -0.86
PTPN12-214ENST00000520947 LBRQ14739 615 aaKnown RBP9.66□□□□□ -0.86
PTPN12-214ENST00000520947 FAM200AQ8TCP9 573 aa9.66□□□□□ -0.86
PTPN12-214ENST00000520947 ZIC5Q96T25 663 aa9.66□□□□□ -0.86
PTPN12-214ENST00000520947 NOVA2Q9UNW9 492 aaKnown RBP9.66□□□□□ -0.86
PTPN12-214ENST00000520947 HCN4Q9Y3Q4 1203 aa9.66□□□□□ -0.86
PTPN12-214ENST00000520947 ATAD2Q6PL18 1390 aa9.65□□□□□ -0.86
PTPN12-214ENST00000520947 ADAMTS2O95450 1211 aa9.65□□□□□ -0.86
PTPN12-214ENST00000520947 CCDC82Q8N4S0 544 aa9.65□□□□□ -0.86
PTPN12-214ENST00000520947 ABHD17AQ96GS6 310 aa9.65□□□□□ -0.86
PTPN12-214ENST00000520947 C1orf115Q9H7X2 142 aa9.65□□□□□ -0.86
PTPN12-214ENST00000520947 MBIPQ9NS73 344 aa9.65□□□□□ -0.86
PTPN12-214ENST00000520947 GJA3Q9Y6H8 435 aa9.65□□□□□ -0.86
PTPN12-214ENST00000520947 MX2P20592 715 aa9.64□□□□□ -0.87
PTPN12-214ENST00000520947 ZCCHC2Q9C0B9 1178 aaKnown RBP9.64□□□□□ -0.87
PTPN12-214ENST00000520947 BNIP3LO60238 219 aa9.63□□□□□ -0.87
PTPN12-214ENST00000520947 SRPK2P78362 688 aaKnown RBP9.63□□□□□ -0.87
PTPN12-214ENST00000520947 SRSF11Q05519 484 aaKnown RBP9.63□□□□□ -0.87
PTPN12-214ENST00000520947 WHAMMQ8TF30 809 aa9.63□□□□□ -0.87
PTPN12-214ENST00000520947 CFHR5Q9BXR6 569 aa9.63□□□□□ -0.87
PTPN12-214ENST00000520947 PHF24Q9UPV7 400 aa9.63□□□□□ -0.87
PTPN12-214ENST00000520947 IGF1RP08069 1367 aa9.63□□□□□ -0.87
PTPN12-214ENST00000520947 FIGNL1Q6PIW4 674 aa9.62□□□□□ -0.87
PTPN12-214ENST00000520947 NLRP8Q86W28 1048 aa9.62□□□□□ -0.87
PTPN12-214ENST00000520947 RHPN1Q8TCX5 695 aa9.62□□□□□ -0.87
PTPN12-214ENST00000520947 KLRG1Q96E93 195 aa9.62□□□□□ -0.87
PTPN12-214ENST00000520947 NGLY1Q96IV0 654 aa9.62□□□□□ -0.87
PTPN12-214ENST00000520947 PHACTR1Q9C0D0 580 aa9.62□□□□□ -0.87
PTPN12-214ENST00000520947 DCDC2BA2VCK2 349 aa9.61□□□□□ -0.87
PTPN12-214ENST00000520947 ATXN7O15265 892 aaPredicted RBP9.61□□□□□ -0.87
PTPN12-214ENST00000520947 SLURP2P0DP57 97 aa9.61□□□□□ -0.87
PTPN12-214ENST00000520947 LRRC69Q6ZNQ3 347 aa9.61□□□□□ -0.87
PTPN12-214ENST00000520947 STK32AQ8WU08 396 aa9.61□□□□□ -0.87
PTPN12-214ENST00000520947 ZMIZ1Q9ULJ6 1067 aa9.61□□□□□ -0.87
PTPN12-214ENST00000520947 ATXN7L1Q9ULK2 861 aaPredicted RBP9.61□□□□□ -0.87
PTPN12-214ENST00000520947 PCDHGC4Q9Y5F7 938 aa9.61□□□□□ -0.87
PTPN12-214ENST00000520947 KHNYNO15037 678 aaKnown RBP9.6□□□□□ -0.87
PTPN12-214ENST00000520947 ZNF385CQ66K41 422 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-214ENST00000520947 SVOPQ8N4V2 548 aa9.6□□□□□ -0.87
PTPN12-214ENST00000520947 PBXIP1Q96AQ6 731 aa9.6□□□□□ -0.87
PTPN12-214ENST00000520947 C2orf49Q9BVC5 232 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-214ENST00000520947 NEUROD4Q9HD90 331 aa9.6□□□□□ -0.87
PTPN12-214ENST00000520947 NDFIP2Q9NV92 336 aa9.6□□□□□ -0.87
PTPN12-214ENST00000520947 FGFR3P22607 806 aa9.59□□□□□ -0.87
PTPN12-214ENST00000520947 IGFBP4P22692 258 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms