RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 BAG6P46379 1132 aa9.83□□□□□ -0.84
CLK4-207ENST00000520909 ARSJQ5FYB0 599 aaPredicted RBP9.83□□□□□ -0.84
CLK4-207ENST00000520909 LINC00114Q6XXX2 140 aa9.83□□□□□ -0.84
CLK4-207ENST00000520909 BTBD6Q96KE9 485 aa9.83□□□□□ -0.84
CLK4-207ENST00000520909 PSMG3-AS1Q96PY0 264 aa9.83□□□□□ -0.84
CLK4-207ENST00000520909 KRTAP9-2Q9BYQ4 174 aa9.83□□□□□ -0.84
CLK4-207ENST00000520909 ATXN7O15265 892 aaPredicted RBP9.82□□□□□ -0.84
CLK4-207ENST00000520909 EPXP11678 715 aa9.82□□□□□ -0.84
CLK4-207ENST00000520909 COL8A1P27658 744 aa9.82□□□□□ -0.84
CLK4-207ENST00000520909 TPRNQ4KMQ1 711 aa9.82□□□□□ -0.84
CLK4-207ENST00000520909 DNAAF2Q9NVR5 837 aaKnown RBP9.82□□□□□ -0.84
CLK4-207ENST00000520909 SERTAD1Q9UHV2 236 aa9.82□□□□□ -0.84
CLK4-207ENST00000520909 NEURL1BA8MQ27 555 aa9.82□□□□□ -0.84
CLK4-207ENST00000520909 ATP4AP20648 1035 aa9.82□□□□□ -0.84
CLK4-207ENST00000520909 SOX11P35716 441 aa9.82□□□□□ -0.84
CLK4-207ENST00000520909 GRIN2CQ14957 1233 aa9.82□□□□□ -0.84
CLK4-207ENST00000520909 NBPF1Q3BBV0 1214 aa9.82□□□□□ -0.84
CLK4-207ENST00000520909 A0A1W2PNR3 127 aa9.81□□□□□ -0.84
CLK4-207ENST00000520909 CDK2AP1O14519 115 aa9.81□□□□□ -0.84
CLK4-207ENST00000520909 GNB5O14775 395 aa9.81□□□□□ -0.84
CLK4-207ENST00000520909 SLC4A9Q96Q91 983 aa9.81□□□□□ -0.84
CLK4-207ENST00000520909 HOXB4P17483 251 aaPredicted RBP9.8□□□□□ -0.84
CLK4-207ENST00000520909 TATP17735 454 aaPredicted RBP9.8□□□□□ -0.84
CLK4-207ENST00000520909 SUV39H2Q9H5I1 410 aa9.8□□□□□ -0.84
CLK4-207ENST00000520909 A6NJY4 79 aa9.79□□□□□ -0.84
CLK4-207ENST00000520909 MAPTP10636 758 aaKnown RBP9.79□□□□□ -0.84
CLK4-207ENST00000520909 TNP2Q05952 138 aa9.79□□□□□ -0.84
CLK4-207ENST00000520909 CABP1Q9NZU7 370 aa9.79□□□□□ -0.84
CLK4-207ENST00000520909 GJA3Q9Y6H8 435 aa9.79□□□□□ -0.84
CLK4-207ENST00000520909 KRTAP9-6A0A140TA67 174 aa9.78□□□□□ -0.84
CLK4-207ENST00000520909 TMEM229AB2RXF0 380 aa9.78□□□□□ -0.84
CLK4-207ENST00000520909 FURINP09958 794 aa9.78□□□□□ -0.84
CLK4-207ENST00000520909 ADH6P28332 368 aa9.78□□□□□ -0.84
CLK4-207ENST00000520909 MTFR1Q15390 333 aa9.78□□□□□ -0.84
CLK4-207ENST00000520909 FAM182BQ5T319 152 aa9.78□□□□□ -0.84
CLK4-207ENST00000520909 DCDC2BA2VCK2 349 aa9.77□□□□□ -0.85
CLK4-207ENST00000520909 KHNYNO15037 678 aaKnown RBP9.77□□□□□ -0.85
CLK4-207ENST00000520909 AVENQ9NQS1 362 aaPredicted RBP9.77□□□□□ -0.85
CLK4-207ENST00000520909 ZDHHC3Q9NYG2 299 aa9.77□□□□□ -0.85
CLK4-207ENST00000520909 NOP53Q9NZM5 478 aaKnown RBP9.77□□□□□ -0.85
CLK4-207ENST00000520909 BACH1O14867 736 aa9.76□□□□□ -0.85
CLK4-207ENST00000520909 CD33P20138 364 aa9.76□□□□□ -0.85
CLK4-207ENST00000520909 ZIC5Q96T25 663 aa9.76□□□□□ -0.85
CLK4-207ENST00000520909 IQSEC3Q9UPP2 1182 aaPredicted RBP9.76□□□□□ -0.85
CLK4-207ENST00000520909 PCDHGA11Q9Y5H2 935 aa9.76□□□□□ -0.85
CLK4-207ENST00000520909 DGKGP49619 791 aa9.75□□□□□ -0.85
CLK4-207ENST00000520909 BICDL1Q6ZP65 573 aa9.75□□□□□ -0.85
CLK4-207ENST00000520909 CHSY3Q70JA7 882 aa9.75□□□□□ -0.85
CLK4-207ENST00000520909 ZNF295-AS1Q8N0V1 137 aa9.75□□□□□ -0.85
CLK4-207ENST00000520909 PRR12Q9ULL5 1215 aa9.75□□□□□ -0.85
CLK4-207ENST00000520909 EML3Q32P44 896 aa9.74□□□□□ -0.85
CLK4-207ENST00000520909 NOD1Q9Y239 953 aa9.74□□□□□ -0.85
CLK4-207ENST00000520909 C1QTNF9BB2RNN3 333 aa9.73□□□□□ -0.85
CLK4-207ENST00000520909 LZTS3O60299 673 aaPredicted RBP9.73□□□□□ -0.85
CLK4-207ENST00000520909 FAM157BP0CG42 384 aa9.73□□□□□ -0.85
CLK4-207ENST00000520909 SKIP12755 728 aa9.73□□□□□ -0.85
CLK4-207ENST00000520909 KLF15Q9UIH9 416 aa9.73□□□□□ -0.85
CLK4-207ENST00000520909 USP3Q9Y6I4 520 aa9.73□□□□□ -0.85
CLK4-207ENST00000520909 PIK3CDO00329 1044 aa9.72□□□□□ -0.85
CLK4-207ENST00000520909 MARK1Q9P0L2 795 aa9.72□□□□□ -0.85
CLK4-207ENST00000520909 HCN2Q9UL51 889 aa9.72□□□□□ -0.85
CLK4-207ENST00000520909 PARP3Q9Y6F1 533 aa9.72□□□□□ -0.85
CLK4-207ENST00000520909 PCBP4P57723 403 aaKnown RBP9.71□□□□□ -0.86
CLK4-207ENST00000520909 PSME1Q06323 249 aa9.71□□□□□ -0.86
CLK4-207ENST00000520909 LAMC2Q13753 1193 aa9.71□□□□□ -0.86
CLK4-207ENST00000520909 MCM6Q14566 821 aa9.71□□□□□ -0.86
CLK4-207ENST00000520909 SAMD5Q5TGI4 173 aa9.71□□□□□ -0.86
CLK4-207ENST00000520909 FCHSD1Q86WN1 690 aa9.71□□□□□ -0.86
CLK4-207ENST00000520909 ZNF468Q5VIY5 522 aaPredicted RBP9.7□□□□□ -0.86
CLK4-207ENST00000520909 CD163Q86VB7 1156 aa9.7□□□□□ -0.86
CLK4-207ENST00000520909 WWC1Q8IX03 1113 aa9.7□□□□□ -0.86
CLK4-207ENST00000520909 SCHIP1Q9P0W5 487 aaPredicted RBP9.7□□□□□ -0.86
CLK4-207ENST00000520909 GTF2IP78347 998 aa9.69□□□□□ -0.86
CLK4-207ENST00000520909 NFATC2IPQ8NCF5 419 aa9.69□□□□□ -0.86
CLK4-207ENST00000520909 L3MBTL2Q969R5 705 aa9.69□□□□□ -0.86
CLK4-207ENST00000520909 NEUROD4Q9HD90 331 aa9.69□□□□□ -0.86
CLK4-207ENST00000520909 ALAS2P22557 587 aa9.68□□□□□ -0.86
CLK4-207ENST00000520909 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLK4-207ENST00000520909 ALG2Q9H553 416 aa9.68□□□□□ -0.86
CLK4-207ENST00000520909 COG6Q9Y2V7 657 aa9.68□□□□□ -0.86
CLK4-207ENST00000520909 TXLNAP40222 546 aa9.67□□□□□ -0.86
CLK4-207ENST00000520909 TEAD4Q15561 434 aa9.67□□□□□ -0.86
CLK4-207ENST00000520909 STRN4Q9NRL3 753 aa9.67□□□□□ -0.86
CLK4-207ENST00000520909 ZNF358Q9NW07 568 aa9.67□□□□□ -0.86
CLK4-207ENST00000520909 EFSO43281 561 aa9.66□□□□□ -0.86
CLK4-207ENST00000520909 NOS2P35228 1153 aa9.66□□□□□ -0.86
CLK4-207ENST00000520909 CHRNA4P43681 627 aa9.66□□□□□ -0.86
CLK4-207ENST00000520909 NCOA4Q13772 614 aa9.66□□□□□ -0.86
CLK4-207ENST00000520909 PLVAPQ9BX97 442 aa9.66□□□□□ -0.86
CLK4-207ENST00000520909 ELOA3CA0A087WX78 387 aaPredicted RBP9.65□□□□□ -0.86
CLK4-207ENST00000520909 ELOA3DA6NLF2 546 aaPredicted RBP9.65□□□□□ -0.86
CLK4-207ENST00000520909 ELOA3BQ3SY89 546 aa9.65□□□□□ -0.86
CLK4-207ENST00000520909 LRRC69Q6ZNQ3 347 aa9.65□□□□□ -0.86
CLK4-207ENST00000520909 ELOA3Q8NG57 546 aa9.65□□□□□ -0.86
CLK4-207ENST00000520909 ZDHHC1Q8WTX9 485 aa9.65□□□□□ -0.86
CLK4-207ENST00000520909 ZNF232Q9UNY5 417 aa9.65□□□□□ -0.86
CLK4-207ENST00000520909 SYT9Q86SS6 491 aa9.64□□□□□ -0.87
CLK4-207ENST00000520909 KRTAP1-3Q8IUG1 177 aa9.64□□□□□ -0.87
CLK4-207ENST00000520909 SLC9A9Q8IVB4 645 aa9.63□□□□□ -0.87
CLK4-207ENST00000520909 TNS4Q8IZW8 715 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms