RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 CDCA8Q53HL2 280 aa10.8□□□□□ -0.68
SHPRH-208ENST00000520752 CYLDQ9NQC7 956 aa10.8□□□□□ -0.68
SHPRH-208ENST00000520752 FAM13BQ9NYF5 915 aa10.8□□□□□ -0.68
SHPRH-208ENST00000520752 RASA1P20936 1047 aa10.79□□□□□ -0.68
SHPRH-208ENST00000520752 MSNP26038 577 aaKnown RBP10.79□□□□□ -0.68
SHPRH-208ENST00000520752 ELOAQ14241 798 aaKnown RBP10.79□□□□□ -0.68
SHPRH-208ENST00000520752 CENPQQ7L2Z9 268 aaPredicted RBP10.79□□□□□ -0.68
SHPRH-208ENST00000520752 FAM9BQ8IZU0 186 aa10.79□□□□□ -0.68
SHPRH-208ENST00000520752 LARGE2Q8N3Y3 721 aa10.79□□□□□ -0.68
SHPRH-208ENST00000520752 HPS1Q92902 700 aa10.79□□□□□ -0.68
SHPRH-208ENST00000520752 ITPKCQ96DU7 683 aa10.79□□□□□ -0.68
SHPRH-208ENST00000520752 OSBPL3Q9H4L5 887 aa10.79□□□□□ -0.68
SHPRH-208ENST00000520752 ESF1Q9H501 851 aaKnown RBP10.79□□□□□ -0.68
SHPRH-208ENST00000520752 VIRMAQ69YN4 1812 aaKnown RBP10.79□□□□□ -0.68
SHPRH-208ENST00000520752 ZBTB7BO15156 539 aaPredicted RBP10.78□□□□□ -0.68
SHPRH-208ENST00000520752 TIMP2P16035 220 aa10.78□□□□□ -0.68
SHPRH-208ENST00000520752 MCM4P33991 863 aa10.78□□□□□ -0.68
SHPRH-208ENST00000520752 ADD1P35611 737 aaKnown RBP10.78□□□□□ -0.68
SHPRH-208ENST00000520752 WDR4P57081 412 aaKnown RBP10.78□□□□□ -0.68
SHPRH-208ENST00000520752 GTF2IP78347 998 aa10.78□□□□□ -0.68
SHPRH-208ENST00000520752 CLDN10P78369 228 aa10.78□□□□□ -0.68
SHPRH-208ENST00000520752 PTK7Q13308 1070 aa10.78□□□□□ -0.68
SHPRH-208ENST00000520752 LARP1Q6PKG0 1096 aaKnown RBP10.78□□□□□ -0.68
SHPRH-208ENST00000520752 DHX37Q8IY37 1157 aaKnown RBP10.78□□□□□ -0.68
SHPRH-208ENST00000520752 OGFOD1Q8N543 542 aa10.78□□□□□ -0.68
SHPRH-208ENST00000520752 ERBB4Q15303 1308 aa10.78□□□□□ -0.68
SHPRH-208ENST00000520752 POLR1AO95602 1720 aaPredicted RBP10.78□□□□□ -0.68
SHPRH-208ENST00000520752 ZIC2O95409 532 aaPredicted RBP10.77□□□□□ -0.69
SHPRH-208ENST00000520752 PTMAP06454 111 aaKnown RBP10.77□□□□□ -0.69
SHPRH-208ENST00000520752 FAM193AP78312 1265 aa10.77□□□□□ -0.69
SHPRH-208ENST00000520752 SKOR2Q2VWA4 1001 aaPredicted RBP10.77□□□□□ -0.69
SHPRH-208ENST00000520752 CRTC2Q53ET0 693 aaPredicted RBP10.77□□□□□ -0.69
SHPRH-208ENST00000520752 SASS6Q6UVJ0 657 aa10.77□□□□□ -0.69
SHPRH-208ENST00000520752 Q6ZVU0 165 aa10.77□□□□□ -0.69
SHPRH-208ENST00000520752 DNAAF2Q9NVR5 837 aaKnown RBP10.77□□□□□ -0.69
SHPRH-208ENST00000520752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.77□□□□□ -0.69
SHPRH-208ENST00000520752 NINLQ9Y2I6 1382 aa10.77□□□□□ -0.69
SHPRH-208ENST00000520752 GFRA3O60609 400 aa10.76□□□□□ -0.69
SHPRH-208ENST00000520752 AVPP01185 164 aa10.76□□□□□ -0.69
SHPRH-208ENST00000520752 EXOC6Q8TAG9 804 aa10.76□□□□□ -0.69
SHPRH-208ENST00000520752 PANK2Q9BZ23 570 aa10.76□□□□□ -0.69
SHPRH-208ENST00000520752 ANTXR1Q9H6X2 564 aa10.76□□□□□ -0.69
SHPRH-208ENST00000520752 IBTKQ9P2D0 1353 aaPredicted RBP10.76□□□□□ -0.69
SHPRH-208ENST00000520752 NCOA1Q15788 1441 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 UQCRHLA0A096LP55 91 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L15C9J2P7 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L10C9JJH3 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L13C9JLJ4 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L12C9JPN9 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L11C9JVI0 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L21D6R901 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L18D6R9N7 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L22D6RA61 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L17D6RBQ6 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L19D6RCP7 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L20D6RJB6 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 NRG2O14511 850 aaPredicted RBP10.75□□□□□ -0.69
SHPRH-208ENST00000520752 UQCRHP07919 91 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 USP17L24Q0WX57 530 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 SIX5Q8N196 739 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 ZFAND3Q9H8U3 227 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 INSRP06213 1382 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 ZMYM3Q14202 1370 aa10.75□□□□□ -0.69
SHPRH-208ENST00000520752 CCDC66A2RUB6 948 aa10.74□□□□□ -0.69
SHPRH-208ENST00000520752 DGAT1O75907 488 aa10.74□□□□□ -0.69
SHPRH-208ENST00000520752 DKK1O94907 266 aa10.74□□□□□ -0.69
SHPRH-208ENST00000520752 LAPTM4AQ15012 233 aa10.74□□□□□ -0.69
SHPRH-208ENST00000520752 C8orf34Q49A92 452 aa10.74□□□□□ -0.69
SHPRH-208ENST00000520752 CYP2U1Q7Z449 544 aa10.74□□□□□ -0.69
SHPRH-208ENST00000520752 GEMIN8Q9NWZ8 242 aaKnown RBP10.74□□□□□ -0.69
SHPRH-208ENST00000520752 RCAN3Q9UKA8 241 aa10.74□□□□□ -0.69
SHPRH-208ENST00000520752 MYOM3Q5VTT5 1437 aa10.74□□□□□ -0.69
SHPRH-208ENST00000520752 GNRH1P01148 92 aa10.73□□□□□ -0.69
SHPRH-208ENST00000520752 CBLBQ13191 982 aa10.73□□□□□ -0.69
SHPRH-208ENST00000520752 KIAA1024Q9UPX6 916 aa10.73□□□□□ -0.69
SHPRH-208ENST00000520752 KDM2BQ8NHM5 1336 aa10.73□□□□□ -0.69
SHPRH-208ENST00000520752 CCDC7Q96M83 1385 aa10.73□□□□□ -0.69
SHPRH-208ENST00000520752 FAM187AA6NFU0 413 aa10.72□□□□□ -0.69
SHPRH-208ENST00000520752 ADH1AP07327 375 aa10.72□□□□□ -0.69
SHPRH-208ENST00000520752 RBM25P49756 843 aaKnown RBP10.72□□□□□ -0.69
SHPRH-208ENST00000520752 GABPB1Q06547 395 aaPredicted RBP10.72□□□□□ -0.69
SHPRH-208ENST00000520752 NBPF1Q3BBV0 1214 aa10.72□□□□□ -0.69
SHPRH-208ENST00000520752 CCDC102BQ68D86 513 aa10.72□□□□□ -0.69
SHPRH-208ENST00000520752 CREBRFQ8IUR6 639 aa10.72□□□□□ -0.69
SHPRH-208ENST00000520752 ANKMY2Q8IV38 441 aa10.72□□□□□ -0.69
SHPRH-208ENST00000520752 CEP120Q8N960 986 aa10.72□□□□□ -0.69
SHPRH-208ENST00000520752 KDF1Q8NAX2 398 aaPredicted RBP10.72□□□□□ -0.69
SHPRH-208ENST00000520752 NOVA2Q9UNW9 492 aaKnown RBP10.72□□□□□ -0.69
SHPRH-208ENST00000520752 WASLO00401 505 aaPredicted RBP10.71□□□□□ -0.69
SHPRH-208ENST00000520752 HMGN5P82970 282 aaKnown RBP10.71□□□□□ -0.69
SHPRH-208ENST00000520752 ZMYM4Q5VZL5 1548 aa10.71□□□□□ -0.69
SHPRH-208ENST00000520752 RUSC2Q8N2Y8 1516 aa10.71□□□□□ -0.69
SHPRH-208ENST00000520752 ZNF594Q96JF6 807 aaPredicted RBP10.71□□□□□ -0.69
SHPRH-208ENST00000520752 EFCC1Q9HA90 598 aa10.71□□□□□ -0.69
SHPRH-208ENST00000520752 CHMP5Q9NZZ3 219 aa10.71□□□□□ -0.69
SHPRH-208ENST00000520752 ZMIZ1Q9ULJ6 1067 aa10.71□□□□□ -0.69
SHPRH-208ENST00000520752 NOL7Q9UMY1 257 aaKnown RBP10.71□□□□□ -0.69
SHPRH-208ENST00000520752 CAPN5O15484 640 aaPredicted RBP10.7□□□□□ -0.7
SHPRH-208ENST00000520752 CSB-PGBD3P0DP91 1061 aa10.7□□□□□ -0.7
SHPRH-208ENST00000520752 PSME1Q06323 249 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms