RNA–Protein interactions for RNA: ENST00000520709.5

TMEM55A-205, humanhuman

TSL 3

Gene TMEM55A, Length 649 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-205ENST00000520709 TM4SF1P30408 202 aa18.37■□□□□ 0.53
TMEM55A-205ENST00000520709 MTHFSDQ2M296 383 aaKnown RBP18.37■□□□□ 0.53
TMEM55A-205ENST00000520709 COL15A1P39059 1388 aa18.37■□□□□ 0.53
TMEM55A-205ENST00000520709 COL11A2P13942 1736 aaPredicted RBP18.37■□□□□ 0.53
TMEM55A-205ENST00000520709 WDR90Q96KV7 1748 aa18.37■□□□□ 0.53
TMEM55A-205ENST00000520709 SLC39A6Q13433 755 aa18.36■□□□□ 0.53
TMEM55A-205ENST00000520709 DIAPH1O60610 1272 aaKnown RBP18.35■□□□□ 0.53
TMEM55A-205ENST00000520709 FCHSD2O94868 740 aa18.35■□□□□ 0.53
TMEM55A-205ENST00000520709 DICER1Q9UPY3 1922 aaKnown RBP18.34■□□□□ 0.53
TMEM55A-205ENST00000520709 USPL1Q5W0Q7 1092 aa18.34■□□□□ 0.53
TMEM55A-205ENST00000520709 ZBTB1Q9Y2K1 713 aa18.34■□□□□ 0.53
TMEM55A-205ENST00000520709 CACNA1SQ13698 1873 aa18.34■□□□□ 0.53
TMEM55A-205ENST00000520709 ARFGEF2Q9Y6D5 1785 aa18.34■□□□□ 0.53
TMEM55A-205ENST00000520709 CC2D1BQ5T0F9 858 aaKnown RBP18.33■□□□□ 0.52
TMEM55A-205ENST00000520709 ARHGAP27Q6ZUM4 889 aa18.33■□□□□ 0.52
TMEM55A-205ENST00000520709 VSIG10Q8N0Z9 540 aa18.33■□□□□ 0.52
TMEM55A-205ENST00000520709 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
TMEM55A-205ENST00000520709 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
TMEM55A-205ENST00000520709 NARFQ9UHQ1 456 aa18.32■□□□□ 0.52
TMEM55A-205ENST00000520709 FER1L6Q2WGJ9 1857 aa18.32■□□□□ 0.52
TMEM55A-205ENST00000520709 CHRNA5P30532 468 aa18.31■□□□□ 0.52
TMEM55A-205ENST00000520709 ZPR1O75312 459 aa18.3■□□□□ 0.52
TMEM55A-205ENST00000520709 NFIXQ14938 502 aa18.3■□□□□ 0.52
TMEM55A-205ENST00000520709 CARMIL3Q8ND23 1372 aa18.3■□□□□ 0.52
TMEM55A-205ENST00000520709 CEMIPQ8WUJ3 1361 aa18.3■□□□□ 0.52
TMEM55A-205ENST00000520709 DALRD3Q5D0E6 543 aaKnown RBP18.29■□□□□ 0.52
TMEM55A-205ENST00000520709 C9orf131Q5VYM1 1079 aa18.29■□□□□ 0.52
TMEM55A-205ENST00000520709 NMRK2Q9NPI5 230 aa18.29■□□□□ 0.52
TMEM55A-205ENST00000520709 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
TMEM55A-205ENST00000520709 LAMB4A4D0S4 1761 aa18.28■□□□□ 0.52
TMEM55A-205ENST00000520709 HEG1Q9ULI3 1381 aa18.28■□□□□ 0.52
TMEM55A-205ENST00000520709 TOMM70O94826 608 aa18.27■□□□□ 0.52
TMEM55A-205ENST00000520709 EIF5P55010 431 aaKnown RBP18.26■□□□□ 0.51
TMEM55A-205ENST00000520709 IL17REQ8NFR9 667 aa18.26■□□□□ 0.51
TMEM55A-205ENST00000520709 GAS2L2Q8NHY3 880 aa18.26■□□□□ 0.51
TMEM55A-205ENST00000520709 ZNF496Q96IT1 587 aaPredicted RBP18.25■□□□□ 0.51
TMEM55A-205ENST00000520709 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
TMEM55A-205ENST00000520709 SERPINB2P05120 415 aa18.24■□□□□ 0.51
TMEM55A-205ENST00000520709 ZNF790Q6PG37 636 aa18.24■□□□□ 0.51
TMEM55A-205ENST00000520709 TTC5Q8N0Z6 440 aa18.24■□□□□ 0.51
TMEM55A-205ENST00000520709 RNF181Q9P0P0 153 aa18.24■□□□□ 0.51
TMEM55A-205ENST00000520709 U2SURPO15042 1029 aaKnown RBP18.23■□□□□ 0.51
TMEM55A-205ENST00000520709 APLP1P51693 650 aa18.23■□□□□ 0.51
TMEM55A-205ENST00000520709 SLX4Q8IY92 1834 aa18.23■□□□□ 0.51
TMEM55A-205ENST00000520709 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
TMEM55A-205ENST00000520709 KDM3BQ7LBC6 1761 aa18.22■□□□□ 0.51
TMEM55A-205ENST00000520709 STARD3NLO95772 234 aa18.22■□□□□ 0.51
TMEM55A-205ENST00000520709 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
TMEM55A-205ENST00000520709 RASSF7Q02833 373 aa18.22■□□□□ 0.51
TMEM55A-205ENST00000520709 TEFQ10587 303 aa18.22■□□□□ 0.51
TMEM55A-205ENST00000520709 RBM46Q8TBY0 533 aaKnown RBP18.22■□□□□ 0.51
TMEM55A-205ENST00000520709 RSPH6AQ9H0K4 717 aa18.22■□□□□ 0.51
TMEM55A-205ENST00000520709 PRELPP51888 382 aa18.21■□□□□ 0.51
TMEM55A-205ENST00000520709 IFFO2Q5TF58 517 aa18.21■□□□□ 0.51
TMEM55A-205ENST00000520709 A0A087WZG4 1122 aa18.2■□□□□ 0.5
TMEM55A-205ENST00000520709 PHACTR3Q96KR7 559 aa18.2■□□□□ 0.5
TMEM55A-205ENST00000520709 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
TMEM55A-205ENST00000520709 KDM2BQ8NHM5 1336 aa18.2■□□□□ 0.5
TMEM55A-205ENST00000520709 PRKAR2BP31323 418 aa18.19■□□□□ 0.5
TMEM55A-205ENST00000520709 IL6STP40189 918 aaPredicted RBP18.19■□□□□ 0.5
TMEM55A-205ENST00000520709 TBC1D9BQ66K14 1250 aa18.19■□□□□ 0.5
TMEM55A-205ENST00000520709 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
TMEM55A-205ENST00000520709 TTLL6Q8N841 843 aa18.18■□□□□ 0.5
TMEM55A-205ENST00000520709 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
TMEM55A-205ENST00000520709 NFKBIEO00221 500 aa18.17■□□□□ 0.5
TMEM55A-205ENST00000520709 KCNQ3O43525 872 aa18.17■□□□□ 0.5
TMEM55A-205ENST00000520709 C2CD5Q86YS7 1000 aa18.17■□□□□ 0.5
TMEM55A-205ENST00000520709 NUP98P52948 1817 aa18.16■□□□□ 0.5
TMEM55A-205ENST00000520709 CAMTA2O94983 1202 aa18.16■□□□□ 0.5
TMEM55A-205ENST00000520709 LMNB1P20700 586 aa18.16■□□□□ 0.5
TMEM55A-205ENST00000520709 FSTL1Q12841 308 aa18.16■□□□□ 0.5
TMEM55A-205ENST00000520709 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
TMEM55A-205ENST00000520709 PRR5LQ6MZQ0 368 aa18.16■□□□□ 0.5
TMEM55A-205ENST00000520709 BICDL1Q6ZP65 573 aa18.16■□□□□ 0.5
TMEM55A-205ENST00000520709 H0YIN7 160 aa18.15■□□□□ 0.5
TMEM55A-205ENST00000520709 A1BGP04217 495 aa18.15■□□□□ 0.5
TMEM55A-205ENST00000520709 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
TMEM55A-205ENST00000520709 TBC1D2BQ9UPU7 963 aa18.15■□□□□ 0.5
TMEM55A-205ENST00000520709 PPP2R1AP30153 589 aa18.14■□□□□ 0.49
TMEM55A-205ENST00000520709 C16orf71Q8IYS4 520 aaPredicted RBP18.14■□□□□ 0.49
TMEM55A-205ENST00000520709 BRIP1Q9BX63 1249 aa18.14■□□□□ 0.49
TMEM55A-205ENST00000520709 RRAGCQ9HB90 399 aa18.14■□□□□ 0.49
TMEM55A-205ENST00000520709 PDZRN3Q9UPQ7 1066 aa18.14■□□□□ 0.49
TMEM55A-205ENST00000520709 BTBD11A6QL63 1104 aa18.13■□□□□ 0.49
TMEM55A-205ENST00000520709 GLTPD2A6NH11 291 aa18.12■□□□□ 0.49
TMEM55A-205ENST00000520709 PDE6BP35913 854 aa18.12■□□□□ 0.49
TMEM55A-205ENST00000520709 USP16Q9Y5T5 823 aa18.12■□□□□ 0.49
TMEM55A-205ENST00000520709 PRAMEF22A3QJZ6 481 aa18.11■□□□□ 0.49
TMEM55A-205ENST00000520709 NUDCQ9Y266 331 aa18.11■□□□□ 0.49
TMEM55A-205ENST00000520709 ZNF330Q9Y3S2 320 aaPredicted RBP18.11■□□□□ 0.49
TMEM55A-205ENST00000520709 LTBP3Q9NS15 1303 aa18.11■□□□□ 0.49
TMEM55A-205ENST00000520709 SCN4AP35499 1836 aa18.1■□□□□ 0.49
TMEM55A-205ENST00000520709 DZIP3Q86Y13 1208 aaKnown RBP18.1■□□□□ 0.49
TMEM55A-205ENST00000520709 CCDC24Q8N4L8 307 aa18.1■□□□□ 0.49
TMEM55A-205ENST00000520709 PCNTO95613 3336 aa18.09■□□□□ 0.49
TMEM55A-205ENST00000520709 U2AF1L5P0DN76 240 aaPredicted RBP18.09■□□□□ 0.49
TMEM55A-205ENST00000520709 HTRA3P83110 453 aa18.09■□□□□ 0.49
TMEM55A-205ENST00000520709 U2AF1Q01081 240 aaKnown RBP eCLIP18.09■□□□□ 0.49
TMEM55A-205ENST00000520709 MCM10Q7L590 875 aa18.09■□□□□ 0.49
TMEM55A-205ENST00000520709 CNBD1Q8NA66 436 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms