RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ZBTB7BO15156 539 aaPredicted RBP9.22□□□□□ -0.93
SKP1-207ENST00000520417 CELA2BP08218 269 aaPredicted RBP9.22□□□□□ -0.93
SKP1-207ENST00000520417 LBRQ14739 615 aaKnown RBP9.22□□□□□ -0.93
SKP1-207ENST00000520417 SLC9A9Q8IVB4 645 aa9.22□□□□□ -0.93
SKP1-207ENST00000520417 CFHR5Q9BXR6 569 aa9.22□□□□□ -0.93
SKP1-207ENST00000520417 IQSEC3Q9UPP2 1182 aaPredicted RBP9.22□□□□□ -0.93
SKP1-207ENST00000520417 MAFBQ9Y5Q3 323 aaPredicted RBP9.22□□□□□ -0.93
SKP1-207ENST00000520417 A0A1W2PNR3 127 aa9.21□□□□□ -0.94
SKP1-207ENST00000520417 SFI1A8K8P3 1242 aa9.21□□□□□ -0.94
SKP1-207ENST00000520417 ATP4AP20648 1035 aa9.21□□□□□ -0.94
SKP1-207ENST00000520417 LARGE2Q8N3Y3 721 aa9.21□□□□□ -0.94
SKP1-207ENST00000520417 C1orf216Q8TAB5 229 aa9.21□□□□□ -0.94
SKP1-207ENST00000520417 CRISPLD1Q9H336 500 aa9.21□□□□□ -0.94
SKP1-207ENST00000520417 ENAMQ9NRM1 1142 aa9.21□□□□□ -0.94
SKP1-207ENST00000520417 BMP4P12644 408 aa9.2□□□□□ -0.94
SKP1-207ENST00000520417 LMOD1P29536 600 aaPredicted RBP9.2□□□□□ -0.94
SKP1-207ENST00000520417 FIGNL1Q6PIW4 674 aa9.2□□□□□ -0.94
SKP1-207ENST00000520417 LARP1Q6PKG0 1096 aaKnown RBP9.2□□□□□ -0.94
SKP1-207ENST00000520417 NEDD1Q8NHV4 660 aa9.2□□□□□ -0.94
SKP1-207ENST00000520417 L3MBTL2Q969R5 705 aa9.2□□□□□ -0.94
SKP1-207ENST00000520417 PPP1R12CQ9BZL4 782 aa9.2□□□□□ -0.94
SKP1-207ENST00000520417 BNIP3LO60238 219 aa9.19□□□□□ -0.94
SKP1-207ENST00000520417 NOS2P35228 1153 aa9.19□□□□□ -0.94
SKP1-207ENST00000520417 TXLNAP40222 546 aa9.19□□□□□ -0.94
SKP1-207ENST00000520417 TSEN2Q8NCE0 465 aaKnown RBP9.19□□□□□ -0.94
SKP1-207ENST00000520417 ACDQ96AP0 544 aa9.19□□□□□ -0.94
SKP1-207ENST00000520417 ZCCHC2Q9C0B9 1178 aaKnown RBP9.19□□□□□ -0.94
SKP1-207ENST00000520417 NEUROD4Q9HD90 331 aa9.19□□□□□ -0.94
SKP1-207ENST00000520417 ATXN7L1Q9ULK2 861 aaPredicted RBP9.19□□□□□ -0.94
SKP1-207ENST00000520417 CHMP3Q9Y3E7 222 aa9.19□□□□□ -0.94
SKP1-207ENST00000520417 DCDC2BA2VCK2 349 aa9.18□□□□□ -0.94
SKP1-207ENST00000520417 KHNYNO15037 678 aaKnown RBP9.18□□□□□ -0.94
SKP1-207ENST00000520417 ATXN7O15265 892 aaPredicted RBP9.18□□□□□ -0.94
SKP1-207ENST00000520417 BCRP11274 1271 aa9.18□□□□□ -0.94
SKP1-207ENST00000520417 FGFR3P22607 806 aa9.18□□□□□ -0.94
SKP1-207ENST00000520417 MAP2K3P46734 347 aa9.18□□□□□ -0.94
SKP1-207ENST00000520417 UBAP2LQ14157 1087 aaKnown RBP9.18□□□□□ -0.94
SKP1-207ENST00000520417 ZDHHC1Q8WTX9 485 aa9.18□□□□□ -0.94
SKP1-207ENST00000520417 TSPAN10Q9H1Z9 355 aaPredicted RBP9.18□□□□□ -0.94
SKP1-207ENST00000520417 ZDHHC3Q9NYG2 299 aa9.18□□□□□ -0.94
SKP1-207ENST00000520417 PCDHGC4Q9Y5F7 938 aa9.18□□□□□ -0.94
SKP1-207ENST00000520417 SERTM1A2A2V5 107 aa9.17□□□□□ -0.94
SKP1-207ENST00000520417 ARHGEF15O94989 841 aa9.17□□□□□ -0.94
SKP1-207ENST00000520417 EPHA4P54764 986 aa9.17□□□□□ -0.94
SKP1-207ENST00000520417 NLRP8Q86W28 1048 aa9.17□□□□□ -0.94
SKP1-207ENST00000520417 ZNF295-AS1Q8N0V1 137 aa9.17□□□□□ -0.94
SKP1-207ENST00000520417 ZIC5Q96T25 663 aa9.17□□□□□ -0.94
SKP1-207ENST00000520417 HINFPQ9BQA5 517 aa9.17□□□□□ -0.94
SKP1-207ENST00000520417 OXCT2Q9BYC2 517 aaPredicted RBP9.17□□□□□ -0.94
SKP1-207ENST00000520417 LGR5O75473 907 aa9.16□□□□□ -0.94
SKP1-207ENST00000520417 FOXK2Q01167 660 aa9.16□□□□□ -0.94
SKP1-207ENST00000520417 CTBSQ01459 385 aa9.16□□□□□ -0.94
SKP1-207ENST00000520417 TEAD4Q15561 434 aa9.16□□□□□ -0.94
SKP1-207ENST00000520417 SH3PXD2AQ5TCZ1 1133 aa9.16□□□□□ -0.94
SKP1-207ENST00000520417 SIX5Q8N196 739 aa9.16□□□□□ -0.94
SKP1-207ENST00000520417 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
SKP1-207ENST00000520417 KLRG1Q96E93 195 aa9.16□□□□□ -0.94
SKP1-207ENST00000520417 VRTNQ9H8Y1 702 aa9.16□□□□□ -0.94
SKP1-207ENST00000520417 RNF225M0QZC1 329 aaPredicted RBP9.15□□□□□ -0.94
SKP1-207ENST00000520417 RFX1P22670 979 aa9.15□□□□□ -0.94
SKP1-207ENST00000520417 HCN4Q9Y3Q4 1203 aa9.15□□□□□ -0.94
SKP1-207ENST00000520417 PPP1R12BO60237 982 aaPredicted RBP9.14□□□□□ -0.95
SKP1-207ENST00000520417 IRS1P35568 1242 aa9.14□□□□□ -0.95
SKP1-207ENST00000520417 SEC13P55735 322 aa9.14□□□□□ -0.95
SKP1-207ENST00000520417 PSMA6P60900 246 aaKnown RBP9.14□□□□□ -0.95
SKP1-207ENST00000520417 CRTC2Q53ET0 693 aaPredicted RBP9.14□□□□□ -0.95
SKP1-207ENST00000520417 CDCA8Q53HL2 280 aa9.14□□□□□ -0.95
SKP1-207ENST00000520417 LRRC69Q6ZNQ3 347 aa9.14□□□□□ -0.95
SKP1-207ENST00000520417 RHPN1Q8TCX5 695 aa9.14□□□□□ -0.95
SKP1-207ENST00000520417 C2CD2LO14523 706 aa9.13□□□□□ -0.95
SKP1-207ENST00000520417 MAPTP10636 758 aaKnown RBP9.13□□□□□ -0.95
SKP1-207ENST00000520417 CD33P20138 364 aa9.13□□□□□ -0.95
SKP1-207ENST00000520417 GALNT6Q8NCL4 622 aa9.13□□□□□ -0.95
SKP1-207ENST00000520417 SCARF2Q96GP6 870 aaPredicted RBP9.13□□□□□ -0.95
SKP1-207ENST00000520417 NDFIP2Q9NV92 336 aa9.13□□□□□ -0.95
SKP1-207ENST00000520417 DPYDQ12882 1025 aa9.12□□□□□ -0.95
SKP1-207ENST00000520417 SCG3Q8WXD2 468 aaKnown RBP9.12□□□□□ -0.95
SKP1-207ENST00000520417 NGLY1Q96IV0 654 aa9.12□□□□□ -0.95
SKP1-207ENST00000520417 RRAGCQ9HB90 399 aa9.12□□□□□ -0.95
SKP1-207ENST00000520417 DNMT3AQ9Y6K1 912 aaPredicted RBP9.12□□□□□ -0.95
SKP1-207ENST00000520417 USP17L15C9J2P7 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 USP17L10C9JJH3 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 USP17L13C9JLJ4 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 USP17L12C9JPN9 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 USP17L11C9JVI0 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 USP17L21D6R901 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 USP17L18D6R9N7 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 USP17L22D6RA61 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 USP17L17D6RBQ6 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 USP17L19D6RCP7 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 USP17L20D6RJB6 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 M0R2N6 131 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 OIP5O43482 229 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 AMPD1P23109 780 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 TNP2Q05952 138 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 USP17L24Q0WX57 530 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 KCNMA1Q12791 1236 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 KANK4Q5T7N3 995 aaPredicted RBP9.11□□□□□ -0.95
SKP1-207ENST00000520417 PODNQ7Z5L7 613 aa9.11□□□□□ -0.95
SKP1-207ENST00000520417 GGA1Q9UJY5 639 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms