RNA–Protein interactions for RNA: ENST00000520172.5

RUNX1T1-223, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-223	ENST00000520172	CD163L1	Q9NR16	1453 aa		11.25	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	TRPM7	Q96QT4	1865 aa		11.25	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	POLRMT	O00411	1230 aa	Known RBP	11.25	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	PNMA8A	Q86V59	439 aa	Predicted RBP	11.25	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	USHBP1	Q8N6Y0	703 aa		11.25	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	SRP68	Q9UHB9	627 aa	Known RBP	11.25	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	ASAP1	Q9ULH1	1129 aa		11.25	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	TLL2	Q9Y6L7	1015 aa		11.25	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	SMG6	Q86US8	1419 aa	Known RBP	11.25	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	TAT	P17735	454 aa	Predicted RBP	11.24	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	CYP27B1	O15528	508 aa		11.23	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	RPS6KA4	O75676	772 aa		11.23	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	TAOK3	Q9H2K8	898 aa		11.23	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	HPS5	Q9UPZ3	1129 aa		11.23	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	COL5A3	P25940	1745 aa	Predicted RBP	11.23	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	AFDN	P55196	1824 aa	Known RBP	11.23	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	CEP290	O15078	2479 aa		11.22	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	C21orf2	O43822	256 aa		11.22	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	C2CD5	Q86YS7	1000 aa		11.22	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	TMOD3	Q9NYL9	352 aa		11.22	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	KDR	P35968	1356 aa		11.21	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	RNF123	Q5XPI4	1314 aa		11.21	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	CNTNAP4	Q9C0A0	1308 aa		11.21	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	USP42	Q9H9J4	1324 aa	Known RBP	11.21	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	LTBP3	Q9NS15	1303 aa		11.21	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	RC3H1	Q5TC82	1133 aa	Known RBP	11.21	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	CST9	Q5W186	159 aa		11.21	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	CTU1	Q7Z7A3	348 aa	Known RBP	11.21	□□□□□ -0.61
RUNX1T1-223	ENST00000520172	MYH14	Q7Z406	1995 aa	Known RBP	11.21	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	EVC2	Q86UK5	1308 aa		11.2	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	ZNF541	Q9H0D2	1346 aa		11.2	□□□□□ -0.62
RUNX1T1-223	ENST00000520172		H0YIN7	160 aa		11.2	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	HOXC9	P31274	260 aa		11.2	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	NBPF6	Q5VWK0	638 aa		11.2	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	NBPF4	Q96M43	638 aa		11.2	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	STAC3	Q96MF2	364 aa		11.2	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	COLQ	Q9Y215	455 aa	Predicted RBP	11.2	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	TRAF5	O00463	557 aa		11.19	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	AMPH	P49418	695 aa		11.19	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	MNX1	P50219	401 aa	Predicted RBP	11.19	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	SAPCD2	Q86UD0	394 aa		11.19	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	NRXN2	Q9P2S2	1712 aa		11.18	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	ZNF831	Q5JPB2	1677 aa		11.18	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	MAP3K19	Q56UN5	1328 aa		11.18	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	TM4SF1	P30408	202 aa		11.18	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.18	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	RBM42	Q9BTD8	480 aa	Known RBP	11.18	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	ATG3	Q9NT62	314 aa		11.18	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	SBNO2	Q9Y2G9	1366 aa		11.17	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	SLC4A9	Q96Q91	983 aa		11.17	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	ZIC5	Q96T25	663 aa		11.17	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	CACNA1S	Q13698	1873 aa		11.17	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	CARMIL3	Q8ND23	1372 aa		11.16	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	NOG	Q13253	232 aa		11.16	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	AKAP4	Q5JQC9	854 aa		11.16	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	BICDL1	Q6ZP65	573 aa		11.16	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	SAGE1	Q9NXZ1	904 aa		11.16	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	UNC80	Q8N2C7	3258 aa		11.15	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	RANBP2	P49792	3224 aa	Known RBP	11.15	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	HHIPL1	Q96JK4	782 aa		11.15	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	SCN11A	Q9UI33	1791 aa		11.15	□□□□□ -0.62
RUNX1T1-223	ENST00000520172	COL11A2	P13942	1736 aa	Predicted RBP	11.15	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	TRPA1	O75762	1119 aa		11.14	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	CELF2	O95319	508 aa	Known RBP	11.14	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	NKX1-1	Q15270	411 aa	Predicted RBP	11.14	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	BRCA2	P51587	3418 aa		11.14	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	INSR	P06213	1382 aa		11.14	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	ZPR1	O75312	459 aa		11.13	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	SERPINB2	P05120	415 aa		11.13	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	CRKL	P46109	303 aa	Known RBP	11.13	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	NFIX	Q14938	502 aa		11.13	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	USPL1	Q5W0Q7	1092 aa		11.13	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	MPND	Q8N594	471 aa		11.13	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	AKAP11	Q9UKA4	1901 aa		11.13	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	ANKRD31	Q8N7Z5	1873 aa		11.12	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	SLX4	Q8IY92	1834 aa		11.12	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	FBLN1	P23142	703 aa		11.12	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	PKN2	Q16513	984 aa	Known RBP	11.12	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	EDC4	Q6P2E9	1401 aa	Known RBP	11.11	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	LMOD1	P29536	600 aa	Predicted RBP	11.11	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	ZNF408	Q9H9D4	720 aa		11.11	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	RNF186	Q9NXI6	227 aa		11.11	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	RTL1	A6NKG5	1358 aa		11.11	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	SOGA3	Q5TF21	947 aa		11.1	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	GPC2	Q8N158	579 aa		11.1	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	SYNE4	Q8N205	404 aa		11.1	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	HDAC9	Q9UKV0	1011 aa		11.1	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	PRPF40B	Q6NWY9	871 aa	Known RBP	11.09	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.09	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	SPG7	Q9UQ90	795 aa		11.09	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	CENPF	P49454	3210 aa		11.09	□□□□□ -0.63
RUNX1T1-223	ENST00000520172	ARFGEF2	Q9Y6D5	1785 aa		11.08	□□□□□ -0.64
RUNX1T1-223	ENST00000520172	KIAA0100	Q14667	2235 aa	Known RBP	11.08	□□□□□ -0.64
RUNX1T1-223	ENST00000520172	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.08	□□□□□ -0.64
RUNX1T1-223	ENST00000520172	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.08	□□□□□ -0.64
RUNX1T1-223	ENST00000520172	GJA3	Q9Y6H8	435 aa		11.08	□□□□□ -0.64
RUNX1T1-223	ENST00000520172	HTT	P42858	3142 aa		11.07	□□□□□ -0.64
RUNX1T1-223	ENST00000520172	VCAN	P13611	3396 aa		11.07	□□□□□ -0.64
RUNX1T1-223	ENST00000520172	POTEF	A5A3E0	1075 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms