RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 USP48Q86UV5 1035 aa14.44□□□□□ -0.1
CPEB4-207ENST00000519835 UPF3BQ9BZI7 483 aaKnown RBP14.44□□□□□ -0.1
CPEB4-207ENST00000519835 BABAM1Q9NWV8 329 aa14.44□□□□□ -0.1
CPEB4-207ENST00000519835 LRRFIP2Q9Y608 721 aaKnown RBP14.44□□□□□ -0.1
CPEB4-207ENST00000519835 PIK3C2AO00443 1686 aa14.44□□□□□ -0.1
CPEB4-207ENST00000519835 CHD2O14647 1828 aaKnown RBP14.44□□□□□ -0.1
CPEB4-207ENST00000519835 TMEM2Q9UHN6 1383 aa14.43□□□□□ -0.1
CPEB4-207ENST00000519835 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.43□□□□□ -0.1
CPEB4-207ENST00000519835 UBTFL1P0CB47 393 aaPredicted RBP14.43□□□□□ -0.1
CPEB4-207ENST00000519835 SSH3Q8TE77 659 aa14.43□□□□□ -0.1
CPEB4-207ENST00000519835 ATP6V1DQ9Y5K8 247 aa14.43□□□□□ -0.1
CPEB4-207ENST00000519835 TNRQ92752 1358 aa14.42□□□□□ -0.1
CPEB4-207ENST00000519835 GADD45BO75293 160 aaPredicted RBP14.41□□□□□ -0.1
CPEB4-207ENST00000519835 UNC5CLQ8IV45 518 aa14.41□□□□□ -0.1
CPEB4-207ENST00000519835 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.41□□□□□ -0.1
CPEB4-207ENST00000519835 ZSCAN22P10073 491 aaPredicted RBP14.41□□□□□ -0.1
CPEB4-207ENST00000519835 UBE2HP62256 183 aa14.41□□□□□ -0.1
CPEB4-207ENST00000519835 MAP3K5Q99683 1374 aa14.41□□□□□ -0.1
CPEB4-207ENST00000519835 GNAT3A8MTJ3 354 aa14.4□□□□□ -0.1
CPEB4-207ENST00000519835 SGSM2O43147 1006 aa14.4□□□□□ -0.1
CPEB4-207ENST00000519835 PIBF1Q8WXW3 757 aa14.4□□□□□ -0.1
CPEB4-207ENST00000519835 PRIMPOLQ96LW4 560 aa14.4□□□□□ -0.1
CPEB4-207ENST00000519835 GDPD2Q9HCC8 539 aa14.4□□□□□ -0.1
CPEB4-207ENST00000519835 PLEKHG1Q9ULL1 1385 aa14.4□□□□□ -0.1
CPEB4-207ENST00000519835 CNTROBQ8N137 903 aa14.4□□□□□ -0.1
CPEB4-207ENST00000519835 TTC14Q96N46 770 aa14.4□□□□□ -0.1
CPEB4-207ENST00000519835 EYA1Q99502 592 aa14.4□□□□□ -0.1
CPEB4-207ENST00000519835 RGPD8O14715 1765 aaPredicted RBP14.4□□□□□ -0.1
CPEB4-207ENST00000519835 MARF1Q9Y4F3 1742 aaKnown RBP14.39□□□□□ -0.11
CPEB4-207ENST00000519835 HMGN5P82970 282 aaKnown RBP14.39□□□□□ -0.11
CPEB4-207ENST00000519835 POLA2Q14181 598 aa14.39□□□□□ -0.11
CPEB4-207ENST00000519835 USP44Q9H0E7 712 aa14.39□□□□□ -0.11
CPEB4-207ENST00000519835 ESF1Q9H501 851 aaKnown RBP14.39□□□□□ -0.11
CPEB4-207ENST00000519835 NWD1Q149M9 1564 aa14.39□□□□□ -0.11
CPEB4-207ENST00000519835 STX6O43752 255 aa14.39□□□□□ -0.11
CPEB4-207ENST00000519835 AMPHP49418 695 aa14.39□□□□□ -0.11
CPEB4-207ENST00000519835 MYRIPQ8NFW9 859 aa14.39□□□□□ -0.11
CPEB4-207ENST00000519835 PI4K2BQ8TCG2 481 aa14.39□□□□□ -0.11
CPEB4-207ENST00000519835 KIF1BPQ96EK5 621 aa14.39□□□□□ -0.11
CPEB4-207ENST00000519835 LIMCH1Q9UPQ0 1083 aa14.39□□□□□ -0.11
CPEB4-207ENST00000519835 SNX14Q9Y5W7 946 aa14.39□□□□□ -0.11
CPEB4-207ENST00000519835 KDM3BQ7LBC6 1761 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 DIP2AQ14689 1571 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 SOX12O15370 315 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 MLECQ14165 292 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 IL25Q9H293 177 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 IL1RAPL2Q9NP60 686 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 USP25Q9UHP3 1055 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 F13A1P00488 732 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 FAM69CQ0P6D2 419 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 FOXD4L6Q3SYB3 417 aaPredicted RBP14.38□□□□□ -0.11
CPEB4-207ENST00000519835 HSP90AB4PQ58FF6 505 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 DNTTIP2Q5QJE6 756 aaKnown RBP14.38□□□□□ -0.11
CPEB4-207ENST00000519835 FOXD4L3Q6VB84 417 aaPredicted RBP14.38□□□□□ -0.11
CPEB4-207ENST00000519835 RHPN1Q8TCX5 695 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 LSG1Q9H089 658 aaKnown RBP14.38□□□□□ -0.11
CPEB4-207ENST00000519835 SMC3Q9UQE7 1217 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 CNPY2Q9Y2B0 182 aa14.38□□□□□ -0.11
CPEB4-207ENST00000519835 NUTM1Q86Y26 1132 aa14.37□□□□□ -0.11
CPEB4-207ENST00000519835 USP42Q9H9J4 1324 aaKnown RBP14.37□□□□□ -0.11
CPEB4-207ENST00000519835 SURF6O75683 361 aaKnown RBP14.36□□□□□ -0.11
CPEB4-207ENST00000519835 AK2P54819 239 aa14.36□□□□□ -0.11
CPEB4-207ENST00000519835 MED1Q15648 1581 aaPredicted RBP14.36□□□□□ -0.11
CPEB4-207ENST00000519835 TTC41PQ6P2S7 1318 aa14.36□□□□□ -0.11
CPEB4-207ENST00000519835 ADCY5O95622 1261 aa14.36□□□□□ -0.11
CPEB4-207ENST00000519835 SYT1P21579 422 aa14.36□□□□□ -0.11
CPEB4-207ENST00000519835 PPP1R42Q7Z4L9 355 aa14.36□□□□□ -0.11
CPEB4-207ENST00000519835 RUFY2Q8WXA3 655 aa14.36□□□□□ -0.11
CPEB4-207ENST00000519835 CHMP4AQ9BY43 222 aa14.36□□□□□ -0.11
CPEB4-207ENST00000519835 TPM3P06753 285 aa14.35□□□□□ -0.11
CPEB4-207ENST00000519835 HCLS1P14317 486 aaPredicted RBP14.35□□□□□ -0.11
CPEB4-207ENST00000519835 NOLC1Q14978 699 aaKnown RBP eCLIP14.35□□□□□ -0.11
CPEB4-207ENST00000519835 TAF7Q15545 349 aaPredicted RBP14.35□□□□□ -0.11
CPEB4-207ENST00000519835 HDGFL1Q5TGJ6 251 aa14.35□□□□□ -0.11
CPEB4-207ENST00000519835 GTF2F1P35269 517 aaKnown RBP eCLIP14.35□□□□□ -0.11
CPEB4-207ENST00000519835 RUFY3Q7L099 469 aa14.35□□□□□ -0.11
CPEB4-207ENST00000519835 NECTIN2Q92692 538 aa14.35□□□□□ -0.11
CPEB4-207ENST00000519835 ZSCAN31Q96LW9 406 aaPredicted RBP14.35□□□□□ -0.11
CPEB4-207ENST00000519835 SH2B1Q9NRF2 756 aaPredicted RBP14.35□□□□□ -0.11
CPEB4-207ENST00000519835 SPTLC3Q9NUV7 552 aa14.35□□□□□ -0.11
CPEB4-207ENST00000519835 NUTM2FA1L443 756 aa14.34□□□□□ -0.11
CPEB4-207ENST00000519835 PDIA4P13667 645 aaKnown RBP14.34□□□□□ -0.11
CPEB4-207ENST00000519835 SRGAP3O43295 1099 aa14.34□□□□□ -0.11
CPEB4-207ENST00000519835 FIBPO43427 364 aa14.34□□□□□ -0.11
CPEB4-207ENST00000519835 KDM4AO75164 1064 aa14.34□□□□□ -0.11
CPEB4-207ENST00000519835 GLRX3O76003 335 aaKnown RBP14.34□□□□□ -0.11
CPEB4-207ENST00000519835 FUCA2Q9BTY2 467 aa14.34□□□□□ -0.11
CPEB4-207ENST00000519835 LTN1O94822 1766 aa14.33□□□□□ -0.12
CPEB4-207ENST00000519835 HOXB7P09629 217 aa14.33□□□□□ -0.12
CPEB4-207ENST00000519835 VPS53Q5VIR6 699 aa14.33□□□□□ -0.12
CPEB4-207ENST00000519835 SMAP1Q8IYB5 467 aaPredicted RBP14.33□□□□□ -0.12
CPEB4-207ENST00000519835 TM6SF1Q9BZW5 370 aa14.33□□□□□ -0.12
CPEB4-207ENST00000519835 DIAPH3Q9NSV4 1193 aa14.33□□□□□ -0.12
CPEB4-207ENST00000519835 CASTP20810 708 aaKnown RBP14.32□□□□□ -0.12
CPEB4-207ENST00000519835 MAP4K4O95819 1239 aaPredicted RBP14.32□□□□□ -0.12
CPEB4-207ENST00000519835 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
CPEB4-207ENST00000519835 NGDNQ8NEJ9 315 aaKnown RBP14.32□□□□□ -0.12
CPEB4-207ENST00000519835 IL17REQ8NFR9 667 aa14.32□□□□□ -0.12
CPEB4-207ENST00000519835 PODXL2Q9NZ53 605 aa14.32□□□□□ -0.12
CPEB4-207ENST00000519835 LMO7Q8WWI1 1683 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms