RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 DNAJC10Q8IXB1 793 aa22.41■■□□□ 1.18
IGHV3-52-201ENST00000519770 HYPKQ9NX55 129 aa22.41■■□□□ 1.18
IGHV3-52-201ENST00000519770 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
IGHV3-52-201ENST00000519770 DDX21Q9NR30 783 aaKnown RBP eCLIP22.4■■□□□ 1.18
IGHV3-52-201ENST00000519770 CHPF2Q9P2E5 772 aa22.4■■□□□ 1.18
IGHV3-52-201ENST00000519770 PTF1AQ7RTS3 328 aa22.39■■□□□ 1.17
IGHV3-52-201ENST00000519770 CCNL1Q9UK58 526 aaPredicted RBP22.39■■□□□ 1.17
IGHV3-52-201ENST00000519770 NOB1Q9ULX3 412 aaKnown RBP22.39■■□□□ 1.17
IGHV3-52-201ENST00000519770 PTPRCP08575 1304 aa22.38■■□□□ 1.17
IGHV3-52-201ENST00000519770 APBA3O96018 575 aa22.38■■□□□ 1.17
IGHV3-52-201ENST00000519770 FTSJ3Q8IY81 847 aaKnown RBP22.38■■□□□ 1.17
IGHV3-52-201ENST00000519770 API5Q9BZZ5 524 aaKnown RBP22.38■■□□□ 1.17
IGHV3-52-201ENST00000519770 ARHGAP45Q92619 1136 aa22.37■■□□□ 1.17
IGHV3-52-201ENST00000519770 LAMB4A4D0S4 1761 aa22.37■■□□□ 1.17
IGHV3-52-201ENST00000519770 RNF123Q5XPI4 1314 aa22.36■■□□□ 1.17
IGHV3-52-201ENST00000519770 DDX58O95786 925 aaKnown RBP22.36■■□□□ 1.17
IGHV3-52-201ENST00000519770 MYL6BP14649 208 aa22.36■■□□□ 1.17
IGHV3-52-201ENST00000519770 C5P01031 1676 aa22.36■■□□□ 1.17
IGHV3-52-201ENST00000519770 CACNA1FO60840 1977 aa22.36■■□□□ 1.17
IGHV3-52-201ENST00000519770 PLIN1O60240 522 aa22.35■■□□□ 1.17
IGHV3-52-201ENST00000519770 FKBP5Q13451 457 aaPredicted RBP22.35■■□□□ 1.17
IGHV3-52-201ENST00000519770 SLC27A3Q5K4L6 730 aa22.35■■□□□ 1.17
IGHV3-52-201ENST00000519770 ATF7IPQ6VMQ6 1270 aa22.35■■□□□ 1.17
IGHV3-52-201ENST00000519770 A1BGP04217 495 aa22.34■■□□□ 1.17
IGHV3-52-201ENST00000519770 CYP19A1P11511 503 aaPredicted RBP22.34■■□□□ 1.17
IGHV3-52-201ENST00000519770 FLIIQ13045 1269 aa22.34■■□□□ 1.17
IGHV3-52-201ENST00000519770 SLC4A9Q96Q91 983 aa22.34■■□□□ 1.17
IGHV3-52-201ENST00000519770 PLSCR1O15162 318 aa22.33■■□□□ 1.17
IGHV3-52-201ENST00000519770 PDE3AQ14432 1141 aa22.33■■□□□ 1.17
IGHV3-52-201ENST00000519770 DZIP1LQ8IYY4 767 aaKnown RBP22.32■■□□□ 1.16
IGHV3-52-201ENST00000519770 CCDC87Q9NVE4 849 aa22.32■■□□□ 1.16
IGHV3-52-201ENST00000519770 ZNF330Q9Y3S2 320 aaPredicted RBP22.32■■□□□ 1.16
IGHV3-52-201ENST00000519770 ZNF831Q5JPB2 1677 aa22.31■■□□□ 1.16
IGHV3-52-201ENST00000519770 ANXA1P04083 346 aa22.31■■□□□ 1.16
IGHV3-52-201ENST00000519770 AIMP1Q12904 312 aaKnown RBP22.31■■□□□ 1.16
IGHV3-52-201ENST00000519770 ITPK1Q13572 414 aa22.31■■□□□ 1.16
IGHV3-52-201ENST00000519770 CRKLP46109 303 aaKnown RBP22.3■■□□□ 1.16
IGHV3-52-201ENST00000519770 BAG6P46379 1132 aa22.3■■□□□ 1.16
IGHV3-52-201ENST00000519770 CCDC125Q86Z20 511 aa22.3■■□□□ 1.16
IGHV3-52-201ENST00000519770 ARXQ96QS3 562 aa22.3■■□□□ 1.16
IGHV3-52-201ENST00000519770 PHAXQ9H814 394 aaKnown RBP22.3■■□□□ 1.16
IGHV3-52-201ENST00000519770 TRIM27P14373 513 aa22.29■■□□□ 1.16
IGHV3-52-201ENST00000519770 IL6STP40189 918 aaPredicted RBP22.29■■□□□ 1.16
IGHV3-52-201ENST00000519770 PDIA6Q15084 440 aa22.29■■□□□ 1.16
IGHV3-52-201ENST00000519770 TXNRD1Q16881 649 aa22.29■■□□□ 1.16
IGHV3-52-201ENST00000519770 PROSER3Q2NL68 480 aa22.29■■□□□ 1.16
IGHV3-52-201ENST00000519770 KIF6Q6ZMV9 814 aa22.29■■□□□ 1.16
IGHV3-52-201ENST00000519770 G2E3Q7L622 706 aa22.29■■□□□ 1.16
IGHV3-52-201ENST00000519770 XAGE3Q8WTP9 111 aa22.29■■□□□ 1.16
IGHV3-52-201ENST00000519770 CLUAP1Q96AJ1 413 aa22.29■■□□□ 1.16
IGHV3-52-201ENST00000519770 LY75O60449 1722 aa22.28■■□□□ 1.16
IGHV3-52-201ENST00000519770 TJP1Q07157 1748 aa22.28■■□□□ 1.16
IGHV3-52-201ENST00000519770 PIP4K2AP48426 406 aaPredicted RBP22.28■■□□□ 1.16
IGHV3-52-201ENST00000519770 RC3H1Q5TC82 1133 aaKnown RBP22.28■■□□□ 1.16
IGHV3-52-201ENST00000519770 COPS6Q7L5N1 327 aa22.28■■□□□ 1.16
IGHV3-52-201ENST00000519770 RIC3Q7Z5B4 369 aa22.28■■□□□ 1.16
IGHV3-52-201ENST00000519770 CNTNAP4Q9C0A0 1308 aa22.28■■□□□ 1.16
IGHV3-52-201ENST00000519770 NBPF26B4DH59 902 aa22.27■■□□□ 1.16
IGHV3-52-201ENST00000519770 NBPF14Q5TI25 921 aa22.27■■□□□ 1.16
IGHV3-52-201ENST00000519770 NBPF10Q6P3W6 841 aaKnown RBP22.27■■□□□ 1.16
IGHV3-52-201ENST00000519770 NBPF15Q8N660 670 aa22.27■■□□□ 1.16
IGHV3-52-201ENST00000519770 LINC00116Q8NCU8 138 aa22.27■■□□□ 1.16
IGHV3-52-201ENST00000519770 AK7Q96M32 723 aa22.27■■□□□ 1.16
IGHV3-52-201ENST00000519770 CHMP4BQ9H444 224 aaKnown RBP22.27■■□□□ 1.16
IGHV3-52-201ENST00000519770 CICQ96RK0 1608 aaPredicted RBP22.27■■□□□ 1.16
IGHV3-52-201ENST00000519770 A0A087WZG4 1122 aa22.26■■□□□ 1.15
IGHV3-52-201ENST00000519770 KCNQ4P56696 695 aa22.26■■□□□ 1.15
IGHV3-52-201ENST00000519770 IRX6P78412 446 aaPredicted RBP22.26■■□□□ 1.15
IGHV3-52-201ENST00000519770 SLC4A10Q6U841 1118 aa22.26■■□□□ 1.15
IGHV3-52-201ENST00000519770 KSR2Q6VAB6 950 aa22.26■■□□□ 1.15
IGHV3-52-201ENST00000519770 ZBTB1Q9Y2K1 713 aa22.26■■□□□ 1.15
IGHV3-52-201ENST00000519770 FKBP8Q14318 412 aa22.25■■□□□ 1.15
IGHV3-52-201ENST00000519770 INTS5Q6P9B9 1019 aaKnown RBP22.25■■□□□ 1.15
IGHV3-52-201ENST00000519770 ANKRD13DQ6ZTN6 518 aa22.25■■□□□ 1.15
IGHV3-52-201ENST00000519770 CCT4P50991 539 aaKnown RBP22.24■■□□□ 1.15
IGHV3-52-201ENST00000519770 NEXNQ0ZGT2 675 aa22.24■■□□□ 1.15
IGHV3-52-201ENST00000519770 PANK1Q8TE04 598 aa22.24■■□□□ 1.15
IGHV3-52-201ENST00000519770 RTCBQ9Y3I0 505 aaKnown RBP22.24■■□□□ 1.15
IGHV3-52-201ENST00000519770 PI4KAP2A4QPH2 592 aa22.23■■□□□ 1.15
IGHV3-52-201ENST00000519770 ITPRIPQ8IWB1 547 aa22.23■■□□□ 1.15
IGHV3-52-201ENST00000519770 PI4KAP1Q8N8J0 262 aa22.23■■□□□ 1.15
IGHV3-52-201ENST00000519770 PLBD2Q8NHP8 589 aa22.23■■□□□ 1.15
IGHV3-52-201ENST00000519770 DNAAF4Q8WXU2 420 aa22.23■■□□□ 1.15
IGHV3-52-201ENST00000519770 GNPATO15228 680 aa22.22■■□□□ 1.15
IGHV3-52-201ENST00000519770 MAP3K2Q9Y2U5 619 aa22.22■■□□□ 1.15
IGHV3-52-201ENST00000519770 TNS1Q9HBL0 1735 aaKnown RBP22.22■■□□□ 1.15
IGHV3-52-201ENST00000519770 F6X3S4 739 aa22.21■■□□□ 1.15
IGHV3-52-201ENST00000519770 RPS6KA4O75676 772 aa22.21■■□□□ 1.15
IGHV3-52-201ENST00000519770 C20orf194Q5TEA3 1177 aa22.21■■□□□ 1.15
IGHV3-52-201ENST00000519770 LRRC4BQ9NT99 713 aa22.21■■□□□ 1.15
IGHV3-52-201ENST00000519770 DDX19BQ9UMR2 479 aa22.21■■□□□ 1.15
IGHV3-52-201ENST00000519770 COG6Q9Y2V7 657 aa22.21■■□□□ 1.15
IGHV3-52-201ENST00000519770 ABCC4O15439 1325 aa22.21■■□□□ 1.15
IGHV3-52-201ENST00000519770 COL5A3P25940 1745 aaPredicted RBP22.2■■□□□ 1.14
IGHV3-52-201ENST00000519770 EIF5P55010 431 aaKnown RBP22.2■■□□□ 1.14
IGHV3-52-201ENST00000519770 EN1Q05925 392 aaPredicted RBP22.2■■□□□ 1.14
IGHV3-52-201ENST00000519770 MVPQ14764 893 aaKnown RBP22.2■■□□□ 1.14
IGHV3-52-201ENST00000519770 ERICH6BQ5W0A0 696 aa22.2■■□□□ 1.14
IGHV3-52-201ENST00000519770 LRP10Q7Z4F1 713 aa22.2■■□□□ 1.14
IGHV3-52-201ENST00000519770 DZIP3Q86Y13 1208 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms