RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 SLC4A9Q96Q91 983 aa12.22□□□□□ -0.45
VNN3-212ENST00000519686 GOLGB1Q14789 3259 aaKnown RBP12.22□□□□□ -0.45
VNN3-212ENST00000519686 RPS6KA4O75676 772 aa12.21□□□□□ -0.45
VNN3-212ENST00000519686 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
VNN3-212ENST00000519686 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.45
VNN3-212ENST00000519686 WWC3Q9ULE0 1092 aa12.21□□□□□ -0.45
VNN3-212ENST00000519686 CRKLP46109 303 aaKnown RBP12.2□□□□□ -0.46
VNN3-212ENST00000519686 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
VNN3-212ENST00000519686 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
VNN3-212ENST00000519686 U2SURPO15042 1029 aaKnown RBP12.19□□□□□ -0.46
VNN3-212ENST00000519686 GIGYF1O75420 1035 aaPredicted RBP12.19□□□□□ -0.46
VNN3-212ENST00000519686 FAM212AQ96EL1 285 aa12.19□□□□□ -0.46
VNN3-212ENST00000519686 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
VNN3-212ENST00000519686 PARP3Q9Y6F1 533 aa12.19□□□□□ -0.46
VNN3-212ENST00000519686 NPC1L1Q9UHC9 1359 aa12.19□□□□□ -0.46
VNN3-212ENST00000519686 C4AP0C0L4 1744 aa12.19□□□□□ -0.46
VNN3-212ENST00000519686 TJP1Q07157 1748 aa12.19□□□□□ -0.46
VNN3-212ENST00000519686 VIRMAQ69YN4 1812 aaKnown RBP12.19□□□□□ -0.46
VNN3-212ENST00000519686 RNMTO43148 476 aaKnown RBP12.18□□□□□ -0.46
VNN3-212ENST00000519686 LGR6Q9HBX8 967 aa12.18□□□□□ -0.46
VNN3-212ENST00000519686 CCDC87Q9NVE4 849 aa12.18□□□□□ -0.46
VNN3-212ENST00000519686 GYS1P13807 737 aa12.18□□□□□ -0.46
VNN3-212ENST00000519686 C1QTNF8P60827 252 aa12.18□□□□□ -0.46
VNN3-212ENST00000519686 MTHFSDQ2M296 383 aaKnown RBP12.18□□□□□ -0.46
VNN3-212ENST00000519686 MYH14Q7Z406 1995 aaKnown RBP12.17□□□□□ -0.46
VNN3-212ENST00000519686 MRC1P22897 1456 aa12.17□□□□□ -0.46
VNN3-212ENST00000519686 TGFB2P61812 414 aa12.17□□□□□ -0.46
VNN3-212ENST00000519686 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
VNN3-212ENST00000519686 KIF13BQ9NQT8 1826 aa12.16□□□□□ -0.46
VNN3-212ENST00000519686 ZPR1O75312 459 aa12.16□□□□□ -0.46
VNN3-212ENST00000519686 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
VNN3-212ENST00000519686 DNAJC10Q8IXB1 793 aa12.16□□□□□ -0.46
VNN3-212ENST00000519686 TTC5Q8N0Z6 440 aa12.16□□□□□ -0.46
VNN3-212ENST00000519686 N4BP2Q86UW6 1770 aaPredicted RBP12.16□□□□□ -0.46
VNN3-212ENST00000519686 USP42Q9H9J4 1324 aaKnown RBP12.15□□□□□ -0.46
VNN3-212ENST00000519686 PXDNLA1KZ92 1463 aa12.15□□□□□ -0.46
VNN3-212ENST00000519686 SENP3-EIF4A1A0A087X0R7 540 aa12.15□□□□□ -0.46
VNN3-212ENST00000519686 A0A0G2JLW4 131 aa12.15□□□□□ -0.46
VNN3-212ENST00000519686 INTS5Q6P9B9 1019 aaKnown RBP12.15□□□□□ -0.46
VNN3-212ENST00000519686 GAS2L2Q8NHY3 880 aa12.15□□□□□ -0.46
VNN3-212ENST00000519686 SRP68Q9UHB9 627 aaKnown RBP12.15□□□□□ -0.46
VNN3-212ENST00000519686 BCS1LQ9Y276 419 aa12.15□□□□□ -0.46
VNN3-212ENST00000519686 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.47
VNN3-212ENST00000519686 ATP10DQ9P241 1426 aa12.15□□□□□ -0.47
VNN3-212ENST00000519686 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
VNN3-212ENST00000519686 GNAT3A8MTJ3 354 aa12.14□□□□□ -0.47
VNN3-212ENST00000519686 TEFQ10587 303 aa12.14□□□□□ -0.47
VNN3-212ENST00000519686 GSE1Q14687 1217 aa12.14□□□□□ -0.47
VNN3-212ENST00000519686 ZNF526Q8TF50 670 aaPredicted RBP12.14□□□□□ -0.47
VNN3-212ENST00000519686 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
VNN3-212ENST00000519686 NUDCQ9Y266 331 aa12.14□□□□□ -0.47
VNN3-212ENST00000519686 ADAMTS7Q9UKP4 1686 aa12.13□□□□□ -0.47
VNN3-212ENST00000519686 KCPQ6ZWJ8 1503 aa12.13□□□□□ -0.47
VNN3-212ENST00000519686 CYP19A1P11511 503 aaPredicted RBP12.13□□□□□ -0.47
VNN3-212ENST00000519686 DPEP1P16444 411 aa12.12□□□□□ -0.47
VNN3-212ENST00000519686 USPL1Q5W0Q7 1092 aa12.12□□□□□ -0.47
VNN3-212ENST00000519686 VSIG10Q8N0Z9 540 aa12.12□□□□□ -0.47
VNN3-212ENST00000519686 KIAA1551Q9HCM1 1747 aa12.12□□□□□ -0.47
VNN3-212ENST00000519686 SOS1Q07889 1333 aaPredicted RBP12.12□□□□□ -0.47
VNN3-212ENST00000519686 COL15A1P39059 1388 aa12.12□□□□□ -0.47
VNN3-212ENST00000519686 FCHSD2O94868 740 aa12.11□□□□□ -0.47
VNN3-212ENST00000519686 STARD3NLO95772 234 aa12.11□□□□□ -0.47
VNN3-212ENST00000519686 PRKAR2BP31323 418 aa12.11□□□□□ -0.47
VNN3-212ENST00000519686 ARHGAP27Q6ZUM4 889 aa12.11□□□□□ -0.47
VNN3-212ENST00000519686 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
VNN3-212ENST00000519686 PHF12Q96QT6 1004 aa12.11□□□□□ -0.47
VNN3-212ENST00000519686 UBR2Q8IWV8 1755 aa12.11□□□□□ -0.47
VNN3-212ENST00000519686 ADCY9O60503 1353 aa12.11□□□□□ -0.47
VNN3-212ENST00000519686 U2AF1L5P0DN76 240 aaPredicted RBP12.1□□□□□ -0.47
VNN3-212ENST00000519686 CANXP27824 592 aaKnown RBP12.1□□□□□ -0.47
VNN3-212ENST00000519686 U2AF1Q01081 240 aaKnown RBP eCLIP12.1□□□□□ -0.47
VNN3-212ENST00000519686 DDR1Q08345 913 aa12.1□□□□□ -0.47
VNN3-212ENST00000519686 PIM2Q9P1W9 311 aa12.1□□□□□ -0.47
VNN3-212ENST00000519686 ZBTB1Q9Y2K1 713 aa12.1□□□□□ -0.47
VNN3-212ENST00000519686 POLRMTO00411 1230 aaKnown RBP12.09□□□□□ -0.47
VNN3-212ENST00000519686 ZNF790Q6PG37 636 aa12.09□□□□□ -0.47
VNN3-212ENST00000519686 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
VNN3-212ENST00000519686 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
VNN3-212ENST00000519686 NARFQ9UHQ1 456 aa12.09□□□□□ -0.47
VNN3-212ENST00000519686 A0A087WZG4 1122 aa12.08□□□□□ -0.48
VNN3-212ENST00000519686 PYGBP11216 843 aa12.08□□□□□ -0.48
VNN3-212ENST00000519686 PPP2R1AP30153 589 aa12.08□□□□□ -0.48
VNN3-212ENST00000519686 TM4SF1P30408 202 aa12.08□□□□□ -0.48
VNN3-212ENST00000519686 DALRD3Q5D0E6 543 aaKnown RBP12.08□□□□□ -0.48
VNN3-212ENST00000519686 IL17REQ8NFR9 667 aa12.08□□□□□ -0.48
VNN3-212ENST00000519686 RTF1Q92541 710 aaKnown RBP12.08□□□□□ -0.48
VNN3-212ENST00000519686 ZNF496Q96IT1 587 aaPredicted RBP12.08□□□□□ -0.48
VNN3-212ENST00000519686 PHACTR3Q96KR7 559 aa12.08□□□□□ -0.48
VNN3-212ENST00000519686 RSPH6AQ9H0K4 717 aa12.08□□□□□ -0.48
VNN3-212ENST00000519686 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
VNN3-212ENST00000519686 BRCA1P38398 1863 aaKnown RBP12.08□□□□□ -0.48
VNN3-212ENST00000519686 SIPA1L3O60292 1781 aaPredicted RBP12.08□□□□□ -0.48
VNN3-212ENST00000519686 BTBD11A6QL63 1104 aa12.07□□□□□ -0.48
VNN3-212ENST00000519686 FMNL2Q96PY5 1086 aa12.07□□□□□ -0.48
VNN3-212ENST00000519686 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
VNN3-212ENST00000519686 NEFMP07197 916 aa12.06□□□□□ -0.48
VNN3-212ENST00000519686 KCNA3P22001 575 aa12.06□□□□□ -0.48
VNN3-212ENST00000519686 CHRNA5P30532 468 aa12.06□□□□□ -0.48
VNN3-212ENST00000519686 NFIXQ14938 502 aa12.06□□□□□ -0.48
VNN3-212ENST00000519686 ARFGEF1Q9Y6D6 1849 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms