RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 TM4SF1P30408 202 aa6.96□□□□□ -1.3
AC055854.1-202ENST00000519624 DDR1Q08345 913 aa6.96□□□□□ -1.3
AC055854.1-202ENST00000519624 C2CD5Q86YS7 1000 aa6.96□□□□□ -1.3
AC055854.1-202ENST00000519624 CNTROBQ8N137 903 aa6.96□□□□□ -1.3
AC055854.1-202ENST00000519624 TAOK3Q9H2K8 898 aa6.96□□□□□ -1.3
AC055854.1-202ENST00000519624 HACL1Q9UJ83 578 aa6.96□□□□□ -1.3
AC055854.1-202ENST00000519624 INSRP06213 1382 aa6.95□□□□□ -1.3
AC055854.1-202ENST00000519624 KIF24Q5T7B8 1368 aa6.95□□□□□ -1.3
AC055854.1-202ENST00000519624 HSP90AB1P08238 724 aaKnown RBP6.95□□□□□ -1.3
AC055854.1-202ENST00000519624 GRM1Q13255 1194 aa6.95□□□□□ -1.3
AC055854.1-202ENST00000519624 SLC12A5Q9H2X9 1139 aa6.95□□□□□ -1.3
AC055854.1-202ENST00000519624 TIAM2Q8IVF5 1701 aa6.95□□□□□ -1.3
AC055854.1-202ENST00000519624 A0A1W2PP64 1363 aa6.95□□□□□ -1.3
AC055854.1-202ENST00000519624 ROCK2O75116 1388 aaKnown RBP6.95□□□□□ -1.3
AC055854.1-202ENST00000519624 FLT4P35916 1363 aa6.95□□□□□ -1.3
AC055854.1-202ENST00000519624 KDRP35968 1356 aa6.95□□□□□ -1.3
AC055854.1-202ENST00000519624 ERVV-2B6SEH9 535 aa6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 C21orf2O43822 256 aa6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 EPHX2P34913 555 aa6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 PDE6BP35913 854 aa6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 BRPF1P55201 1214 aaPredicted RBP6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 SOX10P56693 466 aa6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 RRS1Q15050 365 aaKnown RBP6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 ZNF622Q969S3 477 aaKnown RBP eCLIP6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 PUS7Q96PZ0 661 aaKnown RBP6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 DDX21Q9NR30 783 aaKnown RBP eCLIP6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 SRP68Q9UHB9 627 aaKnown RBP6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 SBF1O95248 1867 aa6.94□□□□□ -1.3
AC055854.1-202ENST00000519624 MAP2P11137 1827 aaKnown RBP6.93□□□□□ -1.3
AC055854.1-202ENST00000519624 VIRMAQ69YN4 1812 aaKnown RBP6.93□□□□□ -1.3
AC055854.1-202ENST00000519624 SERPINB2P05120 415 aa6.93□□□□□ -1.3
AC055854.1-202ENST00000519624 PHKG2P15735 406 aa6.93□□□□□ -1.3
AC055854.1-202ENST00000519624 CRKLP46109 303 aaKnown RBP6.93□□□□□ -1.3
AC055854.1-202ENST00000519624 USPL1Q5W0Q7 1092 aa6.93□□□□□ -1.3
AC055854.1-202ENST00000519624 MAP1SQ66K74 1059 aaPredicted RBP6.93□□□□□ -1.3
AC055854.1-202ENST00000519624 CYP4F22Q6NT55 531 aa6.93□□□□□ -1.3
AC055854.1-202ENST00000519624 TSKSQ9UJT2 592 aa6.93□□□□□ -1.3
AC055854.1-202ENST00000519624 SLC24A1O60721 1099 aa6.92□□□□□ -1.3
AC055854.1-202ENST00000519624 HSP90AB2PQ58FF8 381 aa6.92□□□□□ -1.3
AC055854.1-202ENST00000519624 CNKSR1Q969H4 720 aa6.92□□□□□ -1.3
AC055854.1-202ENST00000519624 HHIPL1Q96JK4 782 aa6.92□□□□□ -1.3
AC055854.1-202ENST00000519624 TLL2Q9Y6L7 1015 aa6.92□□□□□ -1.3
AC055854.1-202ENST00000519624 ZNF831Q5JPB2 1677 aa6.92□□□□□ -1.3
AC055854.1-202ENST00000519624 TNRC18O15417 2968 aaPredicted RBP6.91□□□□□ -1.3
AC055854.1-202ENST00000519624 THSD7BQ9C0I4 1608 aa6.91□□□□□ -1.3
AC055854.1-202ENST00000519624 FBLN1P23142 703 aa6.91□□□□□ -1.3
AC055854.1-202ENST00000519624 LMOD1P29536 600 aaPredicted RBP6.91□□□□□ -1.3
AC055854.1-202ENST00000519624 CABP4P57796 275 aa6.91□□□□□ -1.3
AC055854.1-202ENST00000519624 NFIXQ14938 502 aa6.91□□□□□ -1.3
AC055854.1-202ENST00000519624 HABP4Q5JVS0 413 aaKnown RBP6.91□□□□□ -1.3
AC055854.1-202ENST00000519624 SLC4A9Q96Q91 983 aa6.91□□□□□ -1.3
AC055854.1-202ENST00000519624 BRIP1Q9BX63 1249 aa6.91□□□□□ -1.3
AC055854.1-202ENST00000519624 WASHC2AQ641Q2 1341 aa6.91□□□□□ -1.3
AC055854.1-202ENST00000519624 TONSLQ96HA7 1378 aa6.91□□□□□ -1.3
AC055854.1-202ENST00000519624 ITGB4P16144 1822 aa6.9□□□□□ -1.3
AC055854.1-202ENST00000519624 NPHP1O15259 732 aa6.9□□□□□ -1.3
AC055854.1-202ENST00000519624 PTCD1O75127 700 aaKnown RBP6.9□□□□□ -1.3
AC055854.1-202ENST00000519624 GPC2Q8N158 579 aa6.9□□□□□ -1.3
AC055854.1-202ENST00000519624 NARFQ9UHQ1 456 aa6.9□□□□□ -1.3
AC055854.1-202ENST00000519624 AOC2O75106 756 aa6.89□□□□□ -1.31
AC055854.1-202ENST00000519624 NOGQ13253 232 aa6.89□□□□□ -1.31
AC055854.1-202ENST00000519624 CCDC93Q567U6 631 aa6.89□□□□□ -1.31
AC055854.1-202ENST00000519624 AKAP4Q5JQC9 854 aa6.89□□□□□ -1.31
AC055854.1-202ENST00000519624 STYK1Q6J9G0 422 aa6.89□□□□□ -1.31
AC055854.1-202ENST00000519624 BICDL1Q6ZP65 573 aa6.89□□□□□ -1.31
AC055854.1-202ENST00000519624 SAGE1Q9NXZ1 904 aa6.89□□□□□ -1.31
AC055854.1-202ENST00000519624 RNF123Q5XPI4 1314 aa6.89□□□□□ -1.31
AC055854.1-202ENST00000519624 SCN4AP35499 1836 aa6.89□□□□□ -1.31
AC055854.1-202ENST00000519624 NCAPD2Q15021 1401 aa6.88□□□□□ -1.31
AC055854.1-202ENST00000519624 SOS1Q07889 1333 aaPredicted RBP6.88□□□□□ -1.31
AC055854.1-202ENST00000519624 DLL1O00548 723 aa6.88□□□□□ -1.31
AC055854.1-202ENST00000519624 FKBP4Q02790 459 aaKnown RBP eCLIP6.88□□□□□ -1.31
AC055854.1-202ENST00000519624 PKN2Q16513 984 aaKnown RBP6.88□□□□□ -1.31
AC055854.1-202ENST00000519624 PRPF40BQ6NWY9 871 aaKnown RBP6.88□□□□□ -1.31
AC055854.1-202ENST00000519624 USP50Q70EL3 339 aaPredicted RBP6.88□□□□□ -1.31
AC055854.1-202ENST00000519624 SAPCD2Q86UD0 394 aa6.88□□□□□ -1.31
AC055854.1-202ENST00000519624 JDP2Q8WYK2 163 aa6.88□□□□□ -1.31
AC055854.1-202ENST00000519624 GGNBP2Q9H3C7 697 aa6.88□□□□□ -1.31
AC055854.1-202ENST00000519624 LTBP1Q14766 1721 aa6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 COL15A1P39059 1388 aa6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 A0A087WZG4 1122 aa6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 FYB1O15117 783 aa6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 PPM1GO15355 546 aaPredicted RBP6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 EIF6P56537 245 aaKnown RBP6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 ST5P78524 1137 aa6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 PLEKHO1Q53GL0 409 aaPredicted RBP6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 CST9Q5W186 159 aa6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 CIAPIN1Q6FI81 312 aa6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 INTS5Q6P9B9 1019 aaKnown RBP6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 CTU1Q7Z7A3 348 aaKnown RBP6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 RTKN2Q8IZC4 609 aa6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 MASTLQ96GX5 879 aa6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 RGPD2P0DJD1 1756 aa6.87□□□□□ -1.31
AC055854.1-202ENST00000519624 CARMIL3Q8ND23 1372 aa6.86□□□□□ -1.31
AC055854.1-202ENST00000519624 ZNF541Q9H0D2 1346 aa6.86□□□□□ -1.31
AC055854.1-202ENST00000519624 ST20-MTHFSA0A0A6YYL1 179 aa6.86□□□□□ -1.31
AC055854.1-202ENST00000519624 FZD9O00144 591 aa6.86□□□□□ -1.31
AC055854.1-202ENST00000519624 CELF2O95319 508 aaKnown RBP6.86□□□□□ -1.31
AC055854.1-202ENST00000519624 MTHFSP49914 203 aa6.86□□□□□ -1.31
AC055854.1-202ENST00000519624 AMOTQ4VCS5 1084 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms