RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 ZNF446Q9NWS9 450 aa13.62□□□□□ -0.23
SPIDR-211ENST00000519401 NALCNQ8IZF0 1738 aa13.62□□□□□ -0.23
SPIDR-211ENST00000519401 ADGRB1O14514 1584 aa13.61□□□□□ -0.23
SPIDR-211ENST00000519401 GPS2Q13227 327 aa13.61□□□□□ -0.23
SPIDR-211ENST00000519401 CCDC183Q5T5S1 534 aa13.61□□□□□ -0.23
SPIDR-211ENST00000519401 TBC1D9Q6ZT07 1266 aa13.61□□□□□ -0.23
SPIDR-211ENST00000519401 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
SPIDR-211ENST00000519401 SLAIN2Q9P270 581 aa13.61□□□□□ -0.23
SPIDR-211ENST00000519401 FAM135BQ49AJ0 1406 aa13.61□□□□□ -0.23
SPIDR-211ENST00000519401 ST18O60284 1047 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 ATF3P18847 181 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 PKP1Q13835 747 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 SWT1Q5T5J6 900 aaKnown RBP13.6□□□□□ -0.23
SPIDR-211ENST00000519401 MED4Q9NPJ6 270 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 JRKLQ9Y4A0 524 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 DCCP43146 1447 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 WAPLQ7Z5K2 1190 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 CCDC91Q7Z6B0 441 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 RPAINQ86UA6 219 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 CHD1LQ86WJ1 897 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 IQUBQ8NA54 791 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.6□□□□□ -0.23
SPIDR-211ENST00000519401 ROBO1Q9Y6N7 1651 aa13.6□□□□□ -0.23
SPIDR-211ENST00000519401 KNDC1Q76NI1 1749 aa13.59□□□□□ -0.23
SPIDR-211ENST00000519401 CDC45O75419 566 aa13.59□□□□□ -0.23
SPIDR-211ENST00000519401 TNNT1P13805 278 aa13.59□□□□□ -0.23
SPIDR-211ENST00000519401 GSCP56915 257 aaPredicted RBP13.59□□□□□ -0.23
SPIDR-211ENST00000519401 SYT10Q6XYQ8 523 aa13.59□□□□□ -0.23
SPIDR-211ENST00000519401 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
SPIDR-211ENST00000519401 TMEM87AQ8NBN3 555 aa13.59□□□□□ -0.23
SPIDR-211ENST00000519401 PATL2C9JE40 543 aaKnown RBP13.59□□□□□ -0.23
SPIDR-211ENST00000519401 BRD1O95696 1058 aa13.59□□□□□ -0.23
SPIDR-211ENST00000519401 PRR29P0C7W0 189 aa13.59□□□□□ -0.23
SPIDR-211ENST00000519401 ATP2B1P20020 1258 aa13.59□□□□□ -0.23
SPIDR-211ENST00000519401 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
SPIDR-211ENST00000519401 SUGP1Q8IWZ8 645 aaKnown RBP13.59□□□□□ -0.23
SPIDR-211ENST00000519401 TRERF1Q96PN7 1200 aa13.59□□□□□ -0.23
SPIDR-211ENST00000519401 PTPRCP08575 1304 aa13.58□□□□□ -0.24
SPIDR-211ENST00000519401 ATP8B1O43520 1251 aa13.58□□□□□ -0.24
SPIDR-211ENST00000519401 MST1RQ04912 1400 aa13.58□□□□□ -0.24
SPIDR-211ENST00000519401 FBXO38Q6PIJ6 1188 aa13.58□□□□□ -0.24
SPIDR-211ENST00000519401 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
SPIDR-211ENST00000519401 RAI14Q9P0K7 980 aa13.58□□□□□ -0.24
SPIDR-211ENST00000519401 H2AFXP16104 143 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-211ENST00000519401 SRLQ86TD4 932 aa13.57□□□□□ -0.24
SPIDR-211ENST00000519401 DEF6Q9H4E7 631 aa13.57□□□□□ -0.24
SPIDR-211ENST00000519401 GOLGA5Q8TBA6 731 aa13.57□□□□□ -0.24
SPIDR-211ENST00000519401 PSD3Q9NYI0 1048 aa13.57□□□□□ -0.24
SPIDR-211ENST00000519401 PLEKHG2Q9H7P9 1386 aa13.57□□□□□ -0.24
SPIDR-211ENST00000519401 CCDC171Q6TFL3 1326 aa13.56□□□□□ -0.24
SPIDR-211ENST00000519401 MX1P20591 662 aa13.56□□□□□ -0.24
SPIDR-211ENST00000519401 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
SPIDR-211ENST00000519401 HAP1P54257 671 aaPredicted RBP13.55□□□□□ -0.24
SPIDR-211ENST00000519401 TTC31Q49AM3 519 aaPredicted RBP13.55□□□□□ -0.24
SPIDR-211ENST00000519401 KRBA2Q6ZNG9 492 aa13.55□□□□□ -0.24
SPIDR-211ENST00000519401 C10orf67Q8IYJ2 551 aa13.55□□□□□ -0.24
SPIDR-211ENST00000519401 TNNQ9UQP3 1299 aa13.55□□□□□ -0.24
SPIDR-211ENST00000519401 POLR3AO14802 1390 aaPredicted RBP13.55□□□□□ -0.24
SPIDR-211ENST00000519401 MAGEA9P43362 315 aa13.55□□□□□ -0.24
SPIDR-211ENST00000519401 MCM2P49736 904 aa13.55□□□□□ -0.24
SPIDR-211ENST00000519401 ZSCAN26Q16670 478 aa13.55□□□□□ -0.24
SPIDR-211ENST00000519401 FBXO18Q8NFZ0 1043 aa13.55□□□□□ -0.24
SPIDR-211ENST00000519401 TRAK1Q9UPV9 953 aa13.55□□□□□ -0.24
SPIDR-211ENST00000519401 FHOD1Q9Y613 1164 aa13.55□□□□□ -0.24
SPIDR-211ENST00000519401 DLC1Q96QB1 1528 aa13.55□□□□□ -0.24
SPIDR-211ENST00000519401 TRDNQ13061 729 aa13.54□□□□□ -0.24
SPIDR-211ENST00000519401 BRINP3Q76B58 766 aa13.54□□□□□ -0.24
SPIDR-211ENST00000519401 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.54□□□□□ -0.24
SPIDR-211ENST00000519401 PRAM1Q96QH2 718 aa13.54□□□□□ -0.24
SPIDR-211ENST00000519401 FUCA2Q9BTY2 467 aa13.54□□□□□ -0.24
SPIDR-211ENST00000519401 ZBTB40Q9NUA8 1239 aa13.54□□□□□ -0.24
SPIDR-211ENST00000519401 RBM28Q9NW13 759 aaKnown RBP13.54□□□□□ -0.24
SPIDR-211ENST00000519401 KIF2AO00139 706 aaPredicted RBP13.54□□□□□ -0.24
SPIDR-211ENST00000519401 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■■■□ 22
SPIDR-211ENST00000519401 CEP135Q66GS9 1140 aa13.54□□□□□ -0.24
SPIDR-211ENST00000519401 CCDC191Q8NCU4 936 aa13.54□□□□□ -0.24
SPIDR-211ENST00000519401 UBXN6Q9BZV1 441 aa13.54□□□□□ -0.24
SPIDR-211ENST00000519401 CXorf56Q9H5V9 222 aa13.54□□□□□ -0.24
SPIDR-211ENST00000519401 CDC42BPGQ6DT37 1551 aa13.53□□□□□ -0.24
SPIDR-211ENST00000519401 ELP1O95163 1332 aa13.53□□□□□ -0.24
SPIDR-211ENST00000519401 C1orf167Q5SNV9 1468 aa13.53□□□□□ -0.24
SPIDR-211ENST00000519401 HCLS1P14317 486 aaPredicted RBP13.53□□□□□ -0.24
SPIDR-211ENST00000519401 MPNDQ8N594 471 aa13.53□□□□□ -0.24
SPIDR-211ENST00000519401 INTS4Q96HW7 963 aaKnown RBP13.53□□□□□ -0.24
SPIDR-211ENST00000519401 C16orf45Q96MC5 204 aaPredicted RBP13.53□□□□□ -0.24
SPIDR-211ENST00000519401 CEP89Q96ST8 783 aa13.53□□□□□ -0.24
SPIDR-211ENST00000519401 RRP15Q9Y3B9 282 aaKnown RBP13.53□□□□□ -0.24
SPIDR-211ENST00000519401 LRRFIP2Q9Y608 721 aaKnown RBP13.53□□□□□ -0.24
SPIDR-211ENST00000519401 SLU7O95391 586 aaKnown RBP13.52□□□□□ -0.24
SPIDR-211ENST00000519401 NAA30Q147X3 362 aaPredicted RBP13.52□□□□□ -0.24
SPIDR-211ENST00000519401 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.52□□□□□ -0.24
SPIDR-211ENST00000519401 ZGPATQ8N5A5 531 aaKnown RBP13.52□□□□□ -0.24
SPIDR-211ENST00000519401 ZNF215Q9UL58 517 aaPredicted RBP13.52□□□□□ -0.24
SPIDR-211ENST00000519401 SHPRHQ149N8 1683 aa13.52□□□□□ -0.24
SPIDR-211ENST00000519401 IVLP07476 585 aa13.52□□□□□ -0.25
SPIDR-211ENST00000519401 USP26Q9BXU7 913 aa13.52□□□□□ -0.25
SPIDR-211ENST00000519401 ST7Q9NRC1 585 aa13.52□□□□□ -0.25
SPIDR-211ENST00000519401 KCND1Q9NSA2 647 aa13.52□□□□□ -0.25
SPIDR-211ENST00000519401 TRIM66O15016 1216 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms