RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 PARP3Q9Y6F1 533 aa18.62■□□□□ 0.57
BRD9-217ENST00000519112 AFDNP55196 1824 aaKnown RBP18.61■□□□□ 0.57
BRD9-217ENST00000519112 COL15A1P39059 1388 aa18.61■□□□□ 0.57
BRD9-217ENST00000519112 HEG1Q9ULI3 1381 aa18.61■□□□□ 0.57
BRD9-217ENST00000519112 A0A0G2JLW4 131 aa18.61■□□□□ 0.57
BRD9-217ENST00000519112 TM4SF1P30408 202 aa18.61■□□□□ 0.57
BRD9-217ENST00000519112 TGFB2P61812 414 aa18.61■□□□□ 0.57
BRD9-217ENST00000519112 MCM10Q7L590 875 aa18.6■□□□□ 0.57
BRD9-217ENST00000519112 BCL2L12Q9HB09 334 aa18.6■□□□□ 0.57
BRD9-217ENST00000519112 NARFQ9UHQ1 456 aa18.6■□□□□ 0.57
BRD9-217ENST00000519112 POLRMTO00411 1230 aaKnown RBP18.59■□□□□ 0.57
BRD9-217ENST00000519112 CANXP27824 592 aaKnown RBP18.59■□□□□ 0.57
BRD9-217ENST00000519112 DCTN1Q14203 1278 aa18.59■□□□□ 0.57
BRD9-217ENST00000519112 BTBD11A6QL63 1104 aa18.58■□□□□ 0.56
BRD9-217ENST00000519112 ZPR1O75312 459 aa18.58■□□□□ 0.56
BRD9-217ENST00000519112 DPEP1P16444 411 aa18.58■□□□□ 0.56
BRD9-217ENST00000519112 KCNA3P22001 575 aa18.58■□□□□ 0.56
BRD9-217ENST00000519112 EIF5P55010 431 aaKnown RBP18.58■□□□□ 0.56
BRD9-217ENST00000519112 NRXN2Q9P2S2 1712 aa18.57■□□□□ 0.56
BRD9-217ENST00000519112 STARD3NLO95772 234 aa18.57■□□□□ 0.56
BRD9-217ENST00000519112 NFIXQ14938 502 aa18.56■□□□□ 0.56
BRD9-217ENST00000519112 FMNL2Q96PY5 1086 aa18.56■□□□□ 0.56
BRD9-217ENST00000519112 PLEKHF1Q96S99 279 aa18.56■□□□□ 0.56
BRD9-217ENST00000519112 PRAMEF22A3QJZ6 481 aa18.55■□□□□ 0.56
BRD9-217ENST00000519112 DDX10Q13206 875 aaKnown RBP18.55■□□□□ 0.56
BRD9-217ENST00000519112 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
BRD9-217ENST00000519112 TEX13AQ9BXU3 409 aaPredicted RBP18.55■□□□□ 0.56
BRD9-217ENST00000519112 ARFGEF1Q9Y6D6 1849 aa18.55■□□□□ 0.56
BRD9-217ENST00000519112 ADCY9O60503 1353 aa18.55■□□□□ 0.56
BRD9-217ENST00000519112 HTATSF1O43719 755 aaKnown RBP18.54■□□□□ 0.56
BRD9-217ENST00000519112 A1BGP04217 495 aa18.54■□□□□ 0.56
BRD9-217ENST00000519112 BCS1LQ9Y276 419 aa18.54■□□□□ 0.56
BRD9-217ENST00000519112 USP16Q9Y5T5 823 aa18.54■□□□□ 0.56
BRD9-217ENST00000519112 SCN7AQ01118 1682 aa18.54■□□□□ 0.56
BRD9-217ENST00000519112 ATP10DQ9P241 1426 aa18.53■□□□□ 0.56
BRD9-217ENST00000519112 CHRNA5P30532 468 aa18.52■□□□□ 0.56
BRD9-217ENST00000519112 IL6STP40189 918 aaPredicted RBP18.52■□□□□ 0.56
BRD9-217ENST00000519112 KDM3BQ7LBC6 1761 aa18.51■□□□□ 0.55
BRD9-217ENST00000519112 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
BRD9-217ENST00000519112 RALBP1Q15311 655 aa18.51■□□□□ 0.55
BRD9-217ENST00000519112 MIS18AQ9NYP9 233 aa18.51■□□□□ 0.55
BRD9-217ENST00000519112 TBC1D2BQ9UPU7 963 aa18.51■□□□□ 0.55
BRD9-217ENST00000519112 BCORQ6W2J9 1755 aa18.5■□□□□ 0.55
BRD9-217ENST00000519112 A0A087WZG4 1122 aa18.5■□□□□ 0.55
BRD9-217ENST00000519112 SERPINB2P05120 415 aa18.5■□□□□ 0.55
BRD9-217ENST00000519112 ZNF330Q9Y3S2 320 aaPredicted RBP18.5■□□□□ 0.55
BRD9-217ENST00000519112 DLEC1Q9Y238 1755 aa18.5■□□□□ 0.55
BRD9-217ENST00000519112 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
BRD9-217ENST00000519112 TBC1D9BQ66K14 1250 aa18.49■□□□□ 0.55
BRD9-217ENST00000519112 PIM2Q9P1W9 311 aa18.49■□□□□ 0.55
BRD9-217ENST00000519112 CARMIL3Q8ND23 1372 aa18.49■□□□□ 0.55
BRD9-217ENST00000519112 ANKRD31Q8N7Z5 1873 aa18.49■□□□□ 0.55
BRD9-217ENST00000519112 C1QTNF8P60827 252 aa18.48■□□□□ 0.55
BRD9-217ENST00000519112 NFE2L2Q16236 605 aa18.48■□□□□ 0.55
BRD9-217ENST00000519112 BICDL1Q6ZP65 573 aa18.48■□□□□ 0.55
BRD9-217ENST00000519112 THUMPD2Q9BTF0 503 aaKnown RBP18.48■□□□□ 0.55
BRD9-217ENST00000519112 CAMTA2O94983 1202 aa18.47■□□□□ 0.55
BRD9-217ENST00000519112 SNRPA1P09661 255 aaKnown RBP18.47■□□□□ 0.55
BRD9-217ENST00000519112 LAMB4A4D0S4 1761 aa18.47■□□□□ 0.55
BRD9-217ENST00000519112 NBPF26B4DH59 902 aa18.46■□□□□ 0.55
BRD9-217ENST00000519112 GIGYF1O75420 1035 aaPredicted RBP18.46■□□□□ 0.55
BRD9-217ENST00000519112 NBPF10Q6P3W6 841 aaKnown RBP18.46■□□□□ 0.55
BRD9-217ENST00000519112 ARHGAP27Q6ZUM4 889 aa18.46■□□□□ 0.55
BRD9-217ENST00000519112 NBPF15Q8N660 670 aa18.46■□□□□ 0.55
BRD9-217ENST00000519112 SBF1O95248 1867 aa18.46■□□□□ 0.54
BRD9-217ENST00000519112 NEFMP07197 916 aa18.45■□□□□ 0.54
BRD9-217ENST00000519112 DALRD3Q5D0E6 543 aaKnown RBP18.45■□□□□ 0.54
BRD9-217ENST00000519112 ZNF526Q8TF50 670 aaPredicted RBP18.45■□□□□ 0.54
BRD9-217ENST00000519112 DZIP3Q86Y13 1208 aaKnown RBP18.44■□□□□ 0.54
BRD9-217ENST00000519112 MYBBP1AQ9BQG0 1328 aaKnown RBP18.44■□□□□ 0.54
BRD9-217ENST00000519112 CCDC24Q8N4L8 307 aa18.43■□□□□ 0.54
BRD9-217ENST00000519112 GPBP1L1Q9HC44 474 aaPredicted RBP18.43■□□□□ 0.54
BRD9-217ENST00000519112 MAPK8IP3Q9UPT6 1336 aa18.43■□□□□ 0.54
BRD9-217ENST00000519112 COL11A2P13942 1736 aaPredicted RBP18.43■□□□□ 0.54
BRD9-217ENST00000519112 PRR5LQ6MZQ0 368 aa18.42■□□□□ 0.54
BRD9-217ENST00000519112 PNNQ9H307 717 aaKnown RBP18.42■□□□□ 0.54
BRD9-217ENST00000519112 EIF4A1P60842 406 aaKnown RBP18.41■□□□□ 0.54
BRD9-217ENST00000519112 RIPK4P57078 832 aa18.4■□□□□ 0.54
BRD9-217ENST00000519112 NPM2Q86SE8 214 aaKnown RBP18.4■□□□□ 0.54
BRD9-217ENST00000519112 C2CD5Q86YS7 1000 aa18.4■□□□□ 0.54
BRD9-217ENST00000519112 PNISRQ8TF01 805 aaKnown RBP18.4■□□□□ 0.54
BRD9-217ENST00000519112 CCDC88AQ3V6T2 1871 aa18.39■□□□□ 0.54
BRD9-217ENST00000519112 CEP350Q5VT06 3117 aa18.39■□□□□ 0.53
BRD9-217ENST00000519112 TMPOP42166 694 aaKnown RBP18.39■□□□□ 0.53
BRD9-217ENST00000519112 SETDB2Q96T68 719 aa18.39■□□□□ 0.53
BRD9-217ENST00000519112 CACNA1SQ13698 1873 aa18.38■□□□□ 0.53
BRD9-217ENST00000519112 C9orf131Q5VYM1 1079 aa18.38■□□□□ 0.53
BRD9-217ENST00000519112 CLEC4GQ6UXB4 293 aa18.38■□□□□ 0.53
BRD9-217ENST00000519112 CCDC146Q8IYE0 955 aa18.38■□□□□ 0.53
BRD9-217ENST00000519112 BRIP1Q9BX63 1249 aa18.38■□□□□ 0.53
BRD9-217ENST00000519112 NUP98P52948 1817 aa18.37■□□□□ 0.53
BRD9-217ENST00000519112 H0YIN7 160 aa18.37■□□□□ 0.53
BRD9-217ENST00000519112 KIF3CO14782 793 aa18.37■□□□□ 0.53
BRD9-217ENST00000519112 PRELPP51888 382 aa18.37■□□□□ 0.53
BRD9-217ENST00000519112 HLFQ16534 295 aa18.37■□□□□ 0.53
BRD9-217ENST00000519112 TTLL6Q8N841 843 aa18.37■□□□□ 0.53
BRD9-217ENST00000519112 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
BRD9-217ENST00000519112 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
BRD9-217ENST00000519112 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
BRD9-217ENST00000519112 PDE6BP35913 854 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms