RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 NARFQ9UHQ1 456 aa24.58■■□□□ 1.53
HOXA3-203ENST00000518451 USPL1Q5W0Q7 1092 aa24.57■■□□□ 1.52
HOXA3-203ENST00000518451 MAPK8IP3Q9UPT6 1336 aa24.57■■□□□ 1.52
HOXA3-203ENST00000518451 TAF7Q15545 349 aaPredicted RBP24.56■■□□□ 1.52
HOXA3-203ENST00000518451 PLEKHF1Q96S99 279 aa24.56■■□□□ 1.52
HOXA3-203ENST00000518451 COL15A1P39059 1388 aa24.55■■□□□ 1.52
HOXA3-203ENST00000518451 VIRMAQ69YN4 1812 aaKnown RBP24.55■■□□□ 1.52
HOXA3-203ENST00000518451 MYBBP1AQ9BQG0 1328 aaKnown RBP24.55■■□□□ 1.52
HOXA3-203ENST00000518451 TM4SF1P30408 202 aa24.54■■□□□ 1.52
HOXA3-203ENST00000518451 EIF5P55010 431 aaKnown RBP24.54■■□□□ 1.52
HOXA3-203ENST00000518451 DCTN1Q14203 1278 aa24.54■■□□□ 1.52
HOXA3-203ENST00000518451 NFE2L2Q16236 605 aa24.54■■□□□ 1.52
HOXA3-203ENST00000518451 PNISRQ8TF01 805 aaKnown RBP24.54■■□□□ 1.52
HOXA3-203ENST00000518451 SNRPA1P09661 255 aaKnown RBP24.53■■□□□ 1.52
HOXA3-203ENST00000518451 IL6STP40189 918 aaPredicted RBP24.53■■□□□ 1.52
HOXA3-203ENST00000518451 ZNF784Q8NCA9 323 aaPredicted RBP24.53■■□□□ 1.52
HOXA3-203ENST00000518451 KCNQ3O43525 872 aa24.52■■□□□ 1.52
HOXA3-203ENST00000518451 UBR2Q8IWV8 1755 aa24.51■■□□□ 1.51
HOXA3-203ENST00000518451 A0A0G2JLW4 131 aa24.5■■□□□ 1.51
HOXA3-203ENST00000518451 DDR1Q08345 913 aa24.5■■□□□ 1.51
HOXA3-203ENST00000518451 C10orf71Q711Q0 1435 aa24.5■■□□□ 1.51
HOXA3-203ENST00000518451 CHD4Q14839 1912 aa24.49■■□□□ 1.51
HOXA3-203ENST00000518451 UTRNP46939 3433 aa24.49■■□□□ 1.51
HOXA3-203ENST00000518451 POLRMTO00411 1230 aaKnown RBP24.49■■□□□ 1.51
HOXA3-203ENST00000518451 ZNF330Q9Y3S2 320 aaPredicted RBP24.49■■□□□ 1.51
HOXA3-203ENST00000518451 C4AP0C0L4 1744 aa24.49■■□□□ 1.51
HOXA3-203ENST00000518451 SIPA1L3O60292 1781 aaPredicted RBP24.48■■□□□ 1.51
HOXA3-203ENST00000518451 A1BGP04217 495 aa24.48■■□□□ 1.51
HOXA3-203ENST00000518451 USP16Q9Y5T5 823 aa24.48■■□□□ 1.51
HOXA3-203ENST00000518451 DPEP1P16444 411 aa24.47■■□□□ 1.51
HOXA3-203ENST00000518451 NFIXQ14938 502 aa24.47■■□□□ 1.51
HOXA3-203ENST00000518451 WWC3Q9ULE0 1092 aa24.47■■□□□ 1.51
HOXA3-203ENST00000518451 PXDNLA1KZ92 1463 aa24.45■■□□□ 1.51
HOXA3-203ENST00000518451 WDR43Q15061 677 aaKnown RBP eCLIP24.45■■□□□ 1.5
HOXA3-203ENST00000518451 BCL2L12Q9HB09 334 aa24.45■■□□□ 1.5
HOXA3-203ENST00000518451 PIM2Q9P1W9 311 aa24.45■■□□□ 1.5
HOXA3-203ENST00000518451 TBC1D2BQ9UPU7 963 aa24.45■■□□□ 1.5
HOXA3-203ENST00000518451 BCS1LQ9Y276 419 aa24.45■■□□□ 1.5
HOXA3-203ENST00000518451 SERPINB2P05120 415 aa24.44■■□□□ 1.5
HOXA3-203ENST00000518451 RIPK4P57078 832 aa24.44■■□□□ 1.5
HOXA3-203ENST00000518451 LMOD3Q0VAK6 560 aa24.44■■□□□ 1.5
HOXA3-203ENST00000518451 PRKRIP1Q9H875 184 aaPredicted RBP24.44■■□□□ 1.5
HOXA3-203ENST00000518451 MIS18AQ9NYP9 233 aa24.44■■□□□ 1.5
HOXA3-203ENST00000518451 GOLGB1Q14789 3259 aaKnown RBP24.43■■□□□ 1.5
HOXA3-203ENST00000518451 KIF13BQ9NQT8 1826 aa24.41■■□□□ 1.5
HOXA3-203ENST00000518451 BICDL1Q6ZP65 573 aa24.41■■□□□ 1.5
HOXA3-203ENST00000518451 DZIP3Q86Y13 1208 aaKnown RBP24.41■■□□□ 1.5
HOXA3-203ENST00000518451 PRAMEF22A3QJZ6 481 aa24.4■■□□□ 1.5
HOXA3-203ENST00000518451 KCNA3P22001 575 aa24.4■■□□□ 1.5
HOXA3-203ENST00000518451 TMPOP42166 694 aaKnown RBP24.4■■□□□ 1.5
HOXA3-203ENST00000518451 DALRD3Q5D0E6 543 aaKnown RBP24.4■■□□□ 1.5
HOXA3-203ENST00000518451 SETDB2Q96T68 719 aa24.39■■□□□ 1.49
HOXA3-203ENST00000518451 THUMPD2Q9BTF0 503 aaKnown RBP24.39■■□□□ 1.49
HOXA3-203ENST00000518451 BABAM1Q9NWV8 329 aa24.39■■□□□ 1.49
HOXA3-203ENST00000518451 CAMTA2O94983 1202 aa24.38■■□□□ 1.49
HOXA3-203ENST00000518451 TBC1D9BQ66K14 1250 aa24.38■■□□□ 1.49
HOXA3-203ENST00000518451 CLEC4GQ6UXB4 293 aa24.38■■□□□ 1.49
HOXA3-203ENST00000518451 ARHGAP27Q6ZUM4 889 aa24.38■■□□□ 1.49
HOXA3-203ENST00000518451 RUNDC1Q96C34 613 aa24.38■■□□□ 1.49
HOXA3-203ENST00000518451 ZNF652Q9Y2D9 606 aa24.38■■□□□ 1.49
HOXA3-203ENST00000518451 GIGYF1O75420 1035 aaPredicted RBP24.37■■□□□ 1.49
HOXA3-203ENST00000518451 EIF4A1P60842 406 aaKnown RBP24.37■■□□□ 1.49
HOXA3-203ENST00000518451 PDZRN3Q9UPQ7 1066 aa24.37■■□□□ 1.49
HOXA3-203ENST00000518451 RGL2O15211 777 aa24.36■■□□□ 1.49
HOXA3-203ENST00000518451 CHRNA5P30532 468 aa24.36■■□□□ 1.49
HOXA3-203ENST00000518451 ADAMTS8Q9UP79 889 aa24.36■■□□□ 1.49
HOXA3-203ENST00000518451 CARMIL3Q8ND23 1372 aa24.35■■□□□ 1.49
HOXA3-203ENST00000518451 H0YIN7 160 aa24.35■■□□□ 1.49
HOXA3-203ENST00000518451 NPHP1O15259 732 aa24.35■■□□□ 1.49
HOXA3-203ENST00000518451 PIP4K2AP48426 406 aaPredicted RBP24.35■■□□□ 1.49
HOXA3-203ENST00000518451 TSPYL4Q9UJ04 414 aa24.35■■□□□ 1.49
HOXA3-203ENST00000518451 CCDC146Q8IYE0 955 aa24.34■■□□□ 1.49
HOXA3-203ENST00000518451 NBPF26B4DH59 902 aa24.33■■□□□ 1.49
HOXA3-203ENST00000518451 PDE6BP35913 854 aa24.33■■□□□ 1.49
HOXA3-203ENST00000518451 NEUROD2Q15784 382 aa24.33■■□□□ 1.49
HOXA3-203ENST00000518451 NBPF10Q6P3W6 841 aaKnown RBP24.33■■□□□ 1.49
HOXA3-203ENST00000518451 NBPF15Q8N660 670 aa24.33■■□□□ 1.49
HOXA3-203ENST00000518451 BRIP1Q9BX63 1249 aa24.33■■□□□ 1.49
HOXA3-203ENST00000518451 N4BP2Q86UW6 1770 aaPredicted RBP24.33■■□□□ 1.49
HOXA3-203ENST00000518451 C2CD5Q86YS7 1000 aa24.31■■□□□ 1.48
HOXA3-203ENST00000518451 RRP7AQ9Y3A4 280 aaKnown RBP24.31■■□□□ 1.48
HOXA3-203ENST00000518451 DLG5Q8TDM6 1919 aa24.31■■□□□ 1.48
HOXA3-203ENST00000518451 KIAA1551Q9HCM1 1747 aa24.3■■□□□ 1.48
HOXA3-203ENST00000518451 ST5P78524 1137 aa24.3■■□□□ 1.48
HOXA3-203ENST00000518451 TTLL6Q8N841 843 aa24.3■■□□□ 1.48
HOXA3-203ENST00000518451 CNBD1Q8NA66 436 aa24.3■■□□□ 1.48
HOXA3-203ENST00000518451 GPBP1L1Q9HC44 474 aaPredicted RBP24.3■■□□□ 1.48
HOXA3-203ENST00000518451 ATP10DQ9P241 1426 aa24.29■■□□□ 1.48
HOXA3-203ENST00000518451 PRR5LQ6MZQ0 368 aa24.29■■□□□ 1.48
HOXA3-203ENST00000518451 ZNF316A6NFI3 1004 aaPredicted RBP24.28■■□□□ 1.48
HOXA3-203ENST00000518451 NBPF5PQ86XG9 351 aaPredicted RBP24.28■■□□□ 1.48
HOXA3-203ENST00000518451 ERBB4Q15303 1308 aa24.28■■□□□ 1.48
HOXA3-203ENST00000518451 TPTE2Q6XPS3 522 aa24.27■■□□□ 1.48
HOXA3-203ENST00000518451 ADCY9O60503 1353 aa24.27■■□□□ 1.48
HOXA3-203ENST00000518451 NRXN2Q9P2S2 1712 aa24.27■■□□□ 1.48
HOXA3-203ENST00000518451 ERVV-1B6SEH8 477 aa24.26■■□□□ 1.47
HOXA3-203ENST00000518451 KIF6Q6ZMV9 814 aa24.26■■□□□ 1.47
HOXA3-203ENST00000518451 NGEFQ8N5V2 710 aa24.26■■□□□ 1.47
HOXA3-203ENST00000518451 NIP7Q9Y221 180 aaKnown RBP eCLIP24.26■■□□□ 1.47
HOXA3-203ENST00000518451 C1QTNF8P60827 252 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms