RNA–Protein interactions for RNA: ENST00000518430.1

GINS4-202, Transcript of GINS complex subunit 4, humanhuman

TSL 2

Gene GINS4, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-202ENST00000518430 USP25Q9UHP3 1055 aa11.12□□□□□ -0.63
GINS4-202ENST00000518430 DDX41Q9UJV9 622 aaKnown RBP11.12□□□□□ -0.63
GINS4-202ENST00000518430 PAXBP1Q9Y5B6 917 aa11.12□□□□□ -0.63
GINS4-202ENST00000518430 SPATA31A6Q5VVP1 1343 aa11.11□□□□□ -0.63
GINS4-202ENST00000518430 NFAT5O94916 1531 aa11.11□□□□□ -0.63
GINS4-202ENST00000518430 ABCC6O95255 1503 aa11.11□□□□□ -0.63
GINS4-202ENST00000518430 SMTNL1A8MU46 457 aa11.11□□□□□ -0.63
GINS4-202ENST00000518430 ST18O60284 1047 aa11.11□□□□□ -0.63
GINS4-202ENST00000518430 EIF4A2Q14240 407 aaKnown RBP11.11□□□□□ -0.63
GINS4-202ENST00000518430 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
GINS4-202ENST00000518430 VGLL3A8MV65 326 aa11.1□□□□□ -0.63
GINS4-202ENST00000518430 APAF1O14727 1248 aa11.1□□□□□ -0.63
GINS4-202ENST00000518430 SLFN14P0C7P3 912 aa11.1□□□□□ -0.63
GINS4-202ENST00000518430 MCM2P49736 904 aa11.1□□□□□ -0.63
GINS4-202ENST00000518430 MMP14P50281 582 aa11.1□□□□□ -0.63
GINS4-202ENST00000518430 TERF2Q15554 542 aa11.1□□□□□ -0.63
GINS4-202ENST00000518430 DZIP1LQ8IYY4 767 aaKnown RBP11.1□□□□□ -0.63
GINS4-202ENST00000518430 RUNDC1Q96C34 613 aa11.1□□□□□ -0.63
GINS4-202ENST00000518430 KIAA0232Q92628 1395 aa11.1□□□□□ -0.63
GINS4-202ENST00000518430 PHLPP1O60346 1717 aa11.09□□□□□ -0.63
GINS4-202ENST00000518430 COL3A1P02461 1466 aaPredicted RBP11.09□□□□□ -0.63
GINS4-202ENST00000518430 TNNT3P45378 269 aaPredicted RBP11.09□□□□□ -0.63
GINS4-202ENST00000518430 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
GINS4-202ENST00000518430 ANKRD24Q8TF21 1146 aa11.09□□□□□ -0.63
GINS4-202ENST00000518430 BRMS1Q9HCU9 246 aa11.09□□□□□ -0.63
GINS4-202ENST00000518430 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
GINS4-202ENST00000518430 SPDYE4A6NLX3 237 aa11.08□□□□□ -0.64
GINS4-202ENST00000518430 HTATSF1O43719 755 aaKnown RBP11.08□□□□□ -0.64
GINS4-202ENST00000518430 CDC45O75419 566 aa11.08□□□□□ -0.64
GINS4-202ENST00000518430 CSB-PGBD3P0DP91 1061 aa11.08□□□□□ -0.64
GINS4-202ENST00000518430 U2AF2P26368 475 aaKnown RBP eCLIP11.08□□□□□ -0.64
GINS4-202ENST00000518430 EVA1CP58658 441 aa11.08□□□□□ -0.64
GINS4-202ENST00000518430 NUCB1Q02818 461 aa11.08□□□□□ -0.64
GINS4-202ENST00000518430 TEX35Q5T0J7 233 aa11.08□□□□□ -0.64
GINS4-202ENST00000518430 GOLGA6L1Q8N7Z2 621 aa11.08□□□□□ -0.64
GINS4-202ENST00000518430 ZNF397Q8NF99 534 aaPredicted RBP11.08□□□□□ -0.64
GINS4-202ENST00000518430 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
GINS4-202ENST00000518430 CWC15Q9P013 229 aaKnown RBP11.08□□□□□ -0.64
GINS4-202ENST00000518430 CTNNA3Q9UI47 895 aa11.08□□□□□ -0.64
GINS4-202ENST00000518430 COL22A1Q8NFW1 1626 aaPredicted RBP11.07□□□□□ -0.64
GINS4-202ENST00000518430 SYCE3A1L190 88 aa11.07□□□□□ -0.64
GINS4-202ENST00000518430 HSPA1LP34931 641 aa11.07□□□□□ -0.64
GINS4-202ENST00000518430 CASC1Q6TDU7 716 aa11.07□□□□□ -0.64
GINS4-202ENST00000518430 WWC1Q8IX03 1113 aa11.07□□□□□ -0.64
GINS4-202ENST00000518430 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
GINS4-202ENST00000518430 LTV1Q96GA3 475 aaPredicted RBP11.07□□□□□ -0.64
GINS4-202ENST00000518430 ERBB3P21860 1342 aa11.07□□□□□ -0.64
GINS4-202ENST00000518430 IGSF1Q8N6C5 1336 aa11.07□□□□□ -0.64
GINS4-202ENST00000518430 PHRF1Q9P1Y6 1649 aaKnown RBP11.06□□□□□ -0.64
GINS4-202ENST00000518430 FAM83GA6ND36 823 aa11.06□□□□□ -0.64
GINS4-202ENST00000518430 NUTM2BA6NNL0 878 aaPredicted RBP11.06□□□□□ -0.64
GINS4-202ENST00000518430 NUTM2EB1AL46 878 aaPredicted RBP11.06□□□□□ -0.64
GINS4-202ENST00000518430 RIOK3O14730 519 aaKnown RBP11.06□□□□□ -0.64
GINS4-202ENST00000518430 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
GINS4-202ENST00000518430 PRPF40AO75400 957 aaKnown RBP11.06□□□□□ -0.64
GINS4-202ENST00000518430 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
GINS4-202ENST00000518430 SULT6B1Q6IMI4 303 aa11.06□□□□□ -0.64
GINS4-202ENST00000518430 NUTM2AQ8IVF1 878 aaPredicted RBP11.06□□□□□ -0.64
GINS4-202ENST00000518430 PLCD3Q8N3E9 789 aa11.06□□□□□ -0.64
GINS4-202ENST00000518430 TXLNBQ8N3L3 684 aa11.06□□□□□ -0.64
GINS4-202ENST00000518430 FBXO41Q8TF61 875 aa11.06□□□□□ -0.64
GINS4-202ENST00000518430 EYA1Q99502 592 aa11.06□□□□□ -0.64
GINS4-202ENST00000518430 REC8O95072 547 aa11.05□□□□□ -0.64
GINS4-202ENST00000518430 MUM1L1Q5H9M0 696 aa11.05□□□□□ -0.64
GINS4-202ENST00000518430 KIAA1524Q8TCG1 905 aa11.05□□□□□ -0.64
GINS4-202ENST00000518430 GPT2Q8TD30 523 aa11.05□□□□□ -0.64
GINS4-202ENST00000518430 KIF2CQ99661 725 aa11.05□□□□□ -0.64
GINS4-202ENST00000518430 TMEM63CQ9P1W3 806 aa11.05□□□□□ -0.64
GINS4-202ENST00000518430 AXIN2Q9Y2T1 843 aa11.05□□□□□ -0.64
GINS4-202ENST00000518430 MARF1Q9Y4F3 1742 aaKnown RBP11.05□□□□□ -0.64
GINS4-202ENST00000518430 RAD50Q92878 1312 aa11.05□□□□□ -0.64
GINS4-202ENST00000518430 KDRP35968 1356 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 PLEKHG2Q9H7P9 1386 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 TRIM6-TRIM34B2RNG4 842 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 ADAMTS2O95450 1211 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 HMOX1P09601 288 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 PRKAR2BP31323 418 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 NCBP1Q09161 790 aaKnown RBP11.04□□□□□ -0.64
GINS4-202ENST00000518430 LMOD3Q0VAK6 560 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 GPS2Q13227 327 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 NOM1Q5C9Z4 860 aaKnown RBP11.04□□□□□ -0.64
GINS4-202ENST00000518430 CCDC183Q5T5S1 534 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 TOM1L2Q6ZVM7 507 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 CHD1LQ86WJ1 897 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 KIF18AQ8NI77 898 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 PLEKHF1Q96S99 279 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 PHF23Q9BUL5 403 aaPredicted RBP11.04□□□□□ -0.64
GINS4-202ENST00000518430 TRIM34Q9BYJ4 488 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 RASSF4Q9H2L5 321 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 NLRP2Q9NX02 1062 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 BTG4Q9NY30 223 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 MAP2P11137 1827 aaKnown RBP11.04□□□□□ -0.64
GINS4-202ENST00000518430 WDR17Q8IZU2 1322 aa11.04□□□□□ -0.64
GINS4-202ENST00000518430 KIF2AO00139 706 aaPredicted RBP11.03□□□□□ -0.64
GINS4-202ENST00000518430 TPM4P67936 248 aa11.03□□□□□ -0.64
GINS4-202ENST00000518430 AMOTQ4VCS5 1084 aa11.03□□□□□ -0.64
GINS4-202ENST00000518430 MEX3CQ5U5Q3 659 aaKnown RBP11.03□□□□□ -0.64
GINS4-202ENST00000518430 NBPF6Q5VWK0 638 aa11.03□□□□□ -0.64
GINS4-202ENST00000518430 CCDC146Q8IYE0 955 aa11.03□□□□□ -0.64
GINS4-202ENST00000518430 TCP11L2Q8N4U5 519 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms