RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 MYBBP1AQ9BQG0 1328 aaKnown RBP16.29■□□□□ 0.2
MRPS28-202ENST00000518271 RFC4P35249 363 aa16.29■□□□□ 0.2
MRPS28-202ENST00000518271 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
MRPS28-202ENST00000518271 TTC5Q8N0Z6 440 aa16.28■□□□□ 0.2
MRPS28-202ENST00000518271 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.2
MRPS28-202ENST00000518271 YY1P25490 414 aa16.27■□□□□ 0.2
MRPS28-202ENST00000518271 DDR1Q08345 913 aa16.27■□□□□ 0.2
MRPS28-202ENST00000518271 FKBP8Q14318 412 aa16.27■□□□□ 0.2
MRPS28-202ENST00000518271 NLGN1Q8N2Q7 840 aa16.27■□□□□ 0.2
MRPS28-202ENST00000518271 ARFGEF1Q9Y6D6 1849 aa16.26■□□□□ 0.19
MRPS28-202ENST00000518271 DLEC1Q9Y238 1755 aa16.26■□□□□ 0.19
MRPS28-202ENST00000518271 ANKRD31Q8N7Z5 1873 aa16.26■□□□□ 0.19
MRPS28-202ENST00000518271 PRAMEF22A3QJZ6 481 aa16.25■□□□□ 0.19
MRPS28-202ENST00000518271 BTBD11A6QL63 1104 aa16.25■□□□□ 0.19
MRPS28-202ENST00000518271 EIF5P55010 431 aaKnown RBP16.25■□□□□ 0.19
MRPS28-202ENST00000518271 NFE2L2Q16236 605 aa16.25■□□□□ 0.19
MRPS28-202ENST00000518271 GPR162Q16538 588 aa16.25■□□□□ 0.19
MRPS28-202ENST00000518271 FMNL2Q96PY5 1086 aa16.25■□□□□ 0.19
MRPS28-202ENST00000518271 BCL2L12Q9HB09 334 aa16.25■□□□□ 0.19
MRPS28-202ENST00000518271 USPL1Q5W0Q7 1092 aa16.24■□□□□ 0.19
MRPS28-202ENST00000518271 RTF1Q92541 710 aaKnown RBP16.24■□□□□ 0.19
MRPS28-202ENST00000518271 PRKRIP1Q9H875 184 aaPredicted RBP16.24■□□□□ 0.19
MRPS28-202ENST00000518271 NARFQ9UHQ1 456 aa16.24■□□□□ 0.19
MRPS28-202ENST00000518271 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
MRPS28-202ENST00000518271 PELP1Q8IZL8 1130 aaKnown RBP16.23■□□□□ 0.19
MRPS28-202ENST00000518271 THUMPD2Q9BTF0 503 aaKnown RBP16.23■□□□□ 0.19
MRPS28-202ENST00000518271 POLRMTO00411 1230 aaKnown RBP16.22■□□□□ 0.19
MRPS28-202ENST00000518271 STARD3NLO95772 234 aa16.22■□□□□ 0.19
MRPS28-202ENST00000518271 TM4SF1P30408 202 aa16.22■□□□□ 0.19
MRPS28-202ENST00000518271 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
MRPS28-202ENST00000518271 COL11A2P13942 1736 aaPredicted RBP16.22■□□□□ 0.19
MRPS28-202ENST00000518271 A1BGP04217 495 aa16.21■□□□□ 0.19
MRPS28-202ENST00000518271 NFIXQ14938 502 aa16.2■□□□□ 0.18
MRPS28-202ENST00000518271 TAF7Q15545 349 aaPredicted RBP16.2■□□□□ 0.18
MRPS28-202ENST00000518271 TEX13AQ9BXU3 409 aaPredicted RBP16.2■□□□□ 0.18
MRPS28-202ENST00000518271 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
MRPS28-202ENST00000518271 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
MRPS28-202ENST00000518271 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
MRPS28-202ENST00000518271 PARP3Q9Y6F1 533 aa16.2■□□□□ 0.18
MRPS28-202ENST00000518271 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
MRPS28-202ENST00000518271 ZPR1O75312 459 aa16.19■□□□□ 0.18
MRPS28-202ENST00000518271 IL6STP40189 918 aaPredicted RBP16.19■□□□□ 0.18
MRPS28-202ENST00000518271 CARMIL3Q8ND23 1372 aa16.18■□□□□ 0.18
MRPS28-202ENST00000518271 NUP98P52948 1817 aa16.18■□□□□ 0.18
MRPS28-202ENST00000518271 KCNA3P22001 575 aa16.18■□□□□ 0.18
MRPS28-202ENST00000518271 PIP4K2AP48426 406 aaPredicted RBP16.18■□□□□ 0.18
MRPS28-202ENST00000518271 NBPF26B4DH59 902 aa16.17■□□□□ 0.18
MRPS28-202ENST00000518271 NEFMP07197 916 aa16.17■□□□□ 0.18
MRPS28-202ENST00000518271 SNRPA1P09661 255 aaKnown RBP16.17■□□□□ 0.18
MRPS28-202ENST00000518271 DPEP1P16444 411 aa16.17■□□□□ 0.18
MRPS28-202ENST00000518271 TMPOP42166 694 aaKnown RBP16.17■□□□□ 0.18
MRPS28-202ENST00000518271 TGFB2P61812 414 aa16.17■□□□□ 0.18
MRPS28-202ENST00000518271 NBPF10Q6P3W6 841 aaKnown RBP16.17■□□□□ 0.18
MRPS28-202ENST00000518271 CCDC146Q8IYE0 955 aa16.17■□□□□ 0.18
MRPS28-202ENST00000518271 NBPF15Q8N660 670 aa16.17■□□□□ 0.18
MRPS28-202ENST00000518271 ZNF784Q8NCA9 323 aaPredicted RBP16.17■□□□□ 0.18
MRPS28-202ENST00000518271 PNNQ9H307 717 aaKnown RBP16.17■□□□□ 0.18
MRPS28-202ENST00000518271 ADCY9O60503 1353 aa16.16■□□□□ 0.18
MRPS28-202ENST00000518271 A0A0G2JLW4 131 aa16.16■□□□□ 0.18
MRPS28-202ENST00000518271 GRIN3BO60391 1043 aa16.16■□□□□ 0.18
MRPS28-202ENST00000518271 CAMTA2O94983 1202 aa16.16■□□□□ 0.18
MRPS28-202ENST00000518271 ADAMTS8Q9UP79 889 aa16.16■□□□□ 0.18
MRPS28-202ENST00000518271 TBC1D2BQ9UPU7 963 aa16.16■□□□□ 0.18
MRPS28-202ENST00000518271 A0A087WZG4 1122 aa16.15■□□□□ 0.18
MRPS28-202ENST00000518271 SBF1O95248 1867 aa16.15■□□□□ 0.18
MRPS28-202ENST00000518271 RIPK4P57078 832 aa16.15■□□□□ 0.18
MRPS28-202ENST00000518271 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
MRPS28-202ENST00000518271 CACNA1SQ13698 1873 aa16.15■□□□□ 0.18
MRPS28-202ENST00000518271 ARFGEF2Q9Y6D5 1785 aa16.14■□□□□ 0.17
MRPS28-202ENST00000518271 GIGYF1O75420 1035 aaPredicted RBP16.14■□□□□ 0.17
MRPS28-202ENST00000518271 TBC1D9BQ66K14 1250 aa16.14■□□□□ 0.17
MRPS28-202ENST00000518271 PNISRQ8TF01 805 aaKnown RBP16.14■□□□□ 0.17
MRPS28-202ENST00000518271 RRP7AQ9Y3A4 280 aaKnown RBP16.14■□□□□ 0.17
MRPS28-202ENST00000518271 CCDC184Q52MB2 194 aa16.13■□□□□ 0.17
MRPS28-202ENST00000518271 TRIM35Q9UPQ4 493 aa16.13■□□□□ 0.17
MRPS28-202ENST00000518271 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
MRPS28-202ENST00000518271 SERPINB2P05120 415 aa16.12■□□□□ 0.17
MRPS28-202ENST00000518271 CHRNA5P30532 468 aa16.12■□□□□ 0.17
MRPS28-202ENST00000518271 RUNDC1Q96C34 613 aa16.12■□□□□ 0.17
MRPS28-202ENST00000518271 WDR43Q15061 677 aaKnown RBP eCLIP16.11■□□□□ 0.17
MRPS28-202ENST00000518271 BICDL1Q6ZP65 573 aa16.11■□□□□ 0.17
MRPS28-202ENST00000518271 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
MRPS28-202ENST00000518271 TNRC6CQ9HCJ0 1690 aaKnown RBP16.11■□□□□ 0.17
MRPS28-202ENST00000518271 ANKRD36CQ5JPF3 1778 aa16.1■□□□□ 0.17
MRPS28-202ENST00000518271 CCDC88AQ3V6T2 1871 aa16.1■□□□□ 0.17
MRPS28-202ENST00000518271 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
MRPS28-202ENST00000518271 BCS1LQ9Y276 419 aa16.1■□□□□ 0.17
MRPS28-202ENST00000518271 ATP10DQ9P241 1426 aa16.1■□□□□ 0.17
MRPS28-202ENST00000518271 LMOD3Q0VAK6 560 aa16.09■□□□□ 0.17
MRPS28-202ENST00000518271 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
MRPS28-202ENST00000518271 NEUROD2Q15784 382 aa16.08■□□□□ 0.16
MRPS28-202ENST00000518271 PRR5LQ6MZQ0 368 aa16.08■□□□□ 0.16
MRPS28-202ENST00000518271 LRP10Q7Z4F1 713 aa16.08■□□□□ 0.16
MRPS28-202ENST00000518271 BABAM1Q9NWV8 329 aa16.08■□□□□ 0.16
MRPS28-202ENST00000518271 SLX4Q8IY92 1834 aa16.08■□□□□ 0.16
MRPS28-202ENST00000518271 FER1L6Q2WGJ9 1857 aa16.08■□□□□ 0.16
MRPS28-202ENST00000518271 PIM2Q9P1W9 311 aa16.07■□□□□ 0.16
MRPS28-202ENST00000518271 CHL1O00533 1208 aa16.06■□□□□ 0.16
MRPS28-202ENST00000518271 RGL2O15211 777 aa16.06■□□□□ 0.16
MRPS28-202ENST00000518271 CCDC24Q8N4L8 307 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms