RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 SPG7Q9UQ90 795 aa13.59□□□□□ -0.23
BRD9-216ENST00000518251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
BRD9-216ENST00000518251 CT47B1P0C2W7 299 aaPredicted RBP13.58□□□□□ -0.24
BRD9-216ENST00000518251 RRP1P56182 461 aaKnown RBP13.58□□□□□ -0.24
BRD9-216ENST00000518251 LINC00116Q8NCU8 138 aa13.58□□□□□ -0.24
BRD9-216ENST00000518251 MBIPQ9NS73 344 aa13.58□□□□□ -0.24
BRD9-216ENST00000518251 WWC3Q9ULE0 1092 aa13.58□□□□□ -0.24
BRD9-216ENST00000518251 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.24
BRD9-216ENST00000518251 C10orf71Q711Q0 1435 aa13.57□□□□□ -0.24
BRD9-216ENST00000518251 SSFA2P28290 1259 aa13.57□□□□□ -0.24
BRD9-216ENST00000518251 EXOSC9Q06265 439 aaKnown RBP13.57□□□□□ -0.24
BRD9-216ENST00000518251 SMARCC1Q92922 1105 aaPredicted RBP13.57□□□□□ -0.24
BRD9-216ENST00000518251 SCN11AQ9UI33 1791 aa13.57□□□□□ -0.24
BRD9-216ENST00000518251 KIF13BQ9NQT8 1826 aa13.57□□□□□ -0.24
BRD9-216ENST00000518251 KIF3CO14782 793 aa13.56□□□□□ -0.24
BRD9-216ENST00000518251 FKBP8Q14318 412 aa13.56□□□□□ -0.24
BRD9-216ENST00000518251 PIGBQ92521 554 aa13.56□□□□□ -0.24
BRD9-216ENST00000518251 SIPA1L3O60292 1781 aaPredicted RBP13.55□□□□□ -0.24
BRD9-216ENST00000518251 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
BRD9-216ENST00000518251 LOC102724428A0A0B4J2F2 783 aa13.55□□□□□ -0.24
BRD9-216ENST00000518251 CHL1O00533 1208 aa13.55□□□□□ -0.24
BRD9-216ENST00000518251 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
BRD9-216ENST00000518251 SIK1P57059 783 aa13.55□□□□□ -0.24
BRD9-216ENST00000518251 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
BRD9-216ENST00000518251 IL17REQ8NFR9 667 aa13.55□□□□□ -0.24
BRD9-216ENST00000518251 MRC1P22897 1456 aa13.55□□□□□ -0.24
BRD9-216ENST00000518251 ZNF831Q5JPB2 1677 aa13.54□□□□□ -0.24
BRD9-216ENST00000518251 COL5A3P25940 1745 aaPredicted RBP13.54□□□□□ -0.24
BRD9-216ENST00000518251 PHKG2P15735 406 aa13.54□□□□□ -0.24
BRD9-216ENST00000518251 IRX6P78412 446 aaPredicted RBP13.54□□□□□ -0.24
BRD9-216ENST00000518251 ITPK1Q13572 414 aa13.54□□□□□ -0.24
BRD9-216ENST00000518251 IFNL2Q8IZJ0 200 aa13.54□□□□□ -0.24
BRD9-216ENST00000518251 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.54□□□□□ -0.24
BRD9-216ENST00000518251 TSPYL4Q9UJ04 414 aa13.54□□□□□ -0.24
BRD9-216ENST00000518251 KDM6AO15550 1401 aaPredicted RBP13.54□□□□□ -0.24
BRD9-216ENST00000518251 KAT6BQ8WYB5 2073 aa13.53□□□□□ -0.24
BRD9-216ENST00000518251 RNMTO43148 476 aaKnown RBP13.53□□□□□ -0.24
BRD9-216ENST00000518251 BABAM1Q9NWV8 329 aa13.53□□□□□ -0.24
BRD9-216ENST00000518251 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
BRD9-216ENST00000518251 GNPATO15228 680 aa13.52□□□□□ -0.25
BRD9-216ENST00000518251 HSP90AB1P08238 724 aaKnown RBP13.52□□□□□ -0.25
BRD9-216ENST00000518251 RARSP54136 660 aaKnown RBP13.52□□□□□ -0.25
BRD9-216ENST00000518251 TEFQ10587 303 aa13.52□□□□□ -0.25
BRD9-216ENST00000518251 TAF7Q15545 349 aaPredicted RBP13.52□□□□□ -0.25
BRD9-216ENST00000518251 LGR6Q9HBX8 967 aa13.52□□□□□ -0.25
BRD9-216ENST00000518251 BCAR3O75815 825 aa13.51□□□□□ -0.25
BRD9-216ENST00000518251 TWISTNBQ3B726 338 aaPredicted RBP13.51□□□□□ -0.25
BRD9-216ENST00000518251 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
BRD9-216ENST00000518251 TMOD3Q9NYL9 352 aa13.51□□□□□ -0.25
BRD9-216ENST00000518251 ASAP1Q9ULH1 1129 aa13.51□□□□□ -0.25
BRD9-216ENST00000518251 MMP10P09238 476 aa13.5□□□□□ -0.25
BRD9-216ENST00000518251 ALDH1L2Q3SY69 923 aa13.5□□□□□ -0.25
BRD9-216ENST00000518251 ERICH6BQ5W0A0 696 aa13.5□□□□□ -0.25
BRD9-216ENST00000518251 DCAF5Q96JK2 942 aa13.5□□□□□ -0.25
BRD9-216ENST00000518251 N4BP2Q86UW6 1770 aaPredicted RBP13.5□□□□□ -0.25
BRD9-216ENST00000518251 BRCA1P38398 1863 aaKnown RBP13.49□□□□□ -0.25
BRD9-216ENST00000518251 CANXP27824 592 aaKnown RBP13.49□□□□□ -0.25
BRD9-216ENST00000518251 TSPYL6Q8N831 410 aa13.49□□□□□ -0.25
BRD9-216ENST00000518251 C8orf58Q8NAV2 365 aa13.49□□□□□ -0.25
BRD9-216ENST00000518251 SMC4Q9NTJ3 1288 aa13.49□□□□□ -0.25
BRD9-216ENST00000518251 MIS18AQ9NYP9 233 aa13.49□□□□□ -0.25
BRD9-216ENST00000518251 WDR90Q96KV7 1748 aa13.48□□□□□ -0.25
BRD9-216ENST00000518251 PLIN1O60240 522 aa13.48□□□□□ -0.25
BRD9-216ENST00000518251 VAMP4O75379 141 aa13.48□□□□□ -0.25
BRD9-216ENST00000518251 ATP6V1AP38606 617 aa13.48□□□□□ -0.25
BRD9-216ENST00000518251 BCL2L13Q9BXK5 485 aa13.48□□□□□ -0.25
BRD9-216ENST00000518251 ATG3Q9NT62 314 aa13.48□□□□□ -0.25
BRD9-216ENST00000518251 SOS1Q07889 1333 aaPredicted RBP13.47□□□□□ -0.25
BRD9-216ENST00000518251 KIF16BQ96L93 1317 aa13.47□□□□□ -0.25
BRD9-216ENST00000518251 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
BRD9-216ENST00000518251 SSH1Q8WYL5 1049 aa13.47□□□□□ -0.25
BRD9-216ENST00000518251 SLC4A9Q96Q91 983 aa13.47□□□□□ -0.25
BRD9-216ENST00000518251 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
BRD9-216ENST00000518251 CNTNAP4Q9C0A0 1308 aa13.46□□□□□ -0.25
BRD9-216ENST00000518251 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
BRD9-216ENST00000518251 APLP1P51693 650 aa13.46□□□□□ -0.25
BRD9-216ENST00000518251 KRT24Q2M2I5 525 aa13.46□□□□□ -0.25
BRD9-216ENST00000518251 TJP1Q07157 1748 aa13.46□□□□□ -0.25
BRD9-216ENST00000518251 FRAT1Q92837 279 aaPredicted RBP13.45□□□□□ -0.26
BRD9-216ENST00000518251 BCS1LQ9Y276 419 aa13.45□□□□□ -0.26
BRD9-216ENST00000518251 TOMM70O94826 608 aa13.44□□□□□ -0.26
BRD9-216ENST00000518251 GYS1P13807 737 aa13.44□□□□□ -0.26
BRD9-216ENST00000518251 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
BRD9-216ENST00000518251 EIF4A1P60842 406 aaKnown RBP13.44□□□□□ -0.26
BRD9-216ENST00000518251 TGFB2P61812 414 aa13.44□□□□□ -0.26
BRD9-216ENST00000518251 ZKSCAN2Q63HK3 967 aa13.44□□□□□ -0.26
BRD9-216ENST00000518251 NMRK2Q9NPI5 230 aa13.44□□□□□ -0.26
BRD9-216ENST00000518251 RTCBQ9Y3I0 505 aaKnown RBP13.44□□□□□ -0.26
BRD9-216ENST00000518251 A0A0G2JLW4 131 aa13.43□□□□□ -0.26
BRD9-216ENST00000518251 ERVV-2B6SEH9 535 aa13.43□□□□□ -0.26
BRD9-216ENST00000518251 DPEP1P16444 411 aa13.43□□□□□ -0.26
BRD9-216ENST00000518251 ADRA2BP18089 450 aa13.43□□□□□ -0.26
BRD9-216ENST00000518251 CABP4P57796 275 aa13.43□□□□□ -0.26
BRD9-216ENST00000518251 PDE3AQ14432 1141 aa13.43□□□□□ -0.26
BRD9-216ENST00000518251 C20orf194Q5TEA3 1177 aa13.43□□□□□ -0.26
BRD9-216ENST00000518251 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
BRD9-216ENST00000518251 DNAJC5GQ8N7S2 189 aa13.43□□□□□ -0.26
BRD9-216ENST00000518251 ARFGEF1Q9Y6D6 1849 aa13.43□□□□□ -0.26
BRD9-216ENST00000518251 KCPQ6ZWJ8 1503 aa13.43□□□□□ -0.26
BRD9-216ENST00000518251 UBR2Q8IWV8 1755 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms