RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 PPP4R3BQ5MIZ7 849 aa14.88□□□□□ -0.03
PCM1-203ENST00000517545 RASEFQ8IZ41 740 aa14.88□□□□□ -0.03
PCM1-203ENST00000517545 KCNF1Q9H3M0 494 aa14.88□□□□□ -0.03
PCM1-203ENST00000517545 STX6O43752 255 aa14.88□□□□□ -0.03
PCM1-203ENST00000517545 AK2P54819 239 aa14.88□□□□□ -0.03
PCM1-203ENST00000517545 DMTNQ08495 405 aa14.88□□□□□ -0.03
PCM1-203ENST00000517545 DLC1Q96QB1 1528 aa14.88□□□□□ -0.03
PCM1-203ENST00000517545 SPC24Q8NBT2 197 aa14.88□□□□□ -0.03
PCM1-203ENST00000517545 FUCA2Q9BTY2 467 aa14.88□□□□□ -0.03
PCM1-203ENST00000517545 SNX14Q9Y5W7 946 aa14.88□□□□□ -0.03
PCM1-203ENST00000517545 FLIIQ13045 1269 aa14.87□□□□□ -0.03
PCM1-203ENST00000517545 MTHFSDQ2M296 383 aaKnown RBP14.87□□□□□ -0.03
PCM1-203ENST00000517545 RUFY3Q7L099 469 aa14.87□□□□□ -0.03
PCM1-203ENST00000517545 LARGE1O95461 756 aa14.87□□□□□ -0.03
PCM1-203ENST00000517545 TTC14Q96N46 770 aa14.87□□□□□ -0.03
PCM1-203ENST00000517545 PRR36Q9H6K5 1346 aa14.87□□□□□ -0.03
PCM1-203ENST00000517545 F13A1P00488 732 aa14.86□□□□□ -0.03
PCM1-203ENST00000517545 GNAI3P08754 354 aa14.86□□□□□ -0.03
PCM1-203ENST00000517545 METP08581 1390 aa14.86□□□□□ -0.03
PCM1-203ENST00000517545 KIAA1524Q8TCG1 905 aa14.86□□□□□ -0.03
PCM1-203ENST00000517545 STK31Q9BXU1 1019 aa14.86□□□□□ -0.03
PCM1-203ENST00000517545 MAP3K19Q56UN5 1328 aa14.86□□□□□ -0.03
PCM1-203ENST00000517545 DNM1Q05193 864 aaKnown RBP14.85□□□□□ -0.03
PCM1-203ENST00000517545 RAD50Q92878 1312 aa14.85□□□□□ -0.03
PCM1-203ENST00000517545 NUTM2FA1L443 756 aa14.85□□□□□ -0.03
PCM1-203ENST00000517545 SPDYE4A6NLX3 237 aa14.85□□□□□ -0.03
PCM1-203ENST00000517545 LETM1O95202 739 aaPredicted RBP14.85□□□□□ -0.03
PCM1-203ENST00000517545 RTF1Q92541 710 aaKnown RBP14.85□□□□□ -0.03
PCM1-203ENST00000517545 RIOK3O14730 519 aaKnown RBP14.85□□□□□ -0.03
PCM1-203ENST00000517545 SMC3Q9UQE7 1217 aa14.85□□□□□ -0.03
PCM1-203ENST00000517545 SGSM2O43147 1006 aa14.84□□□□□ -0.03
PCM1-203ENST00000517545 NRKQ7Z2Y5 1582 aa14.84□□□□□ -0.03
PCM1-203ENST00000517545 LSG1Q9H089 658 aaKnown RBP14.84□□□□□ -0.03
PCM1-203ENST00000517545 LIMCH1Q9UPQ0 1083 aa14.84□□□□□ -0.03
PCM1-203ENST00000517545 SPG7Q9UQ90 795 aa14.84□□□□□ -0.03
PCM1-203ENST00000517545 UTP14CQ5TAP6 766 aaKnown RBP14.83□□□□□ -0.03
PCM1-203ENST00000517545 CCDC83Q8IWF9 413 aa14.83□□□□□ -0.03
PCM1-203ENST00000517545 USP44Q9H0E7 712 aa14.83□□□□□ -0.03
PCM1-203ENST00000517545 PI4K2BQ8TCG2 481 aa14.83□□□□□ -0.04
PCM1-203ENST00000517545 RICTORQ6R327 1708 aa14.83□□□□□ -0.04
PCM1-203ENST00000517545 TTC21BQ7Z4L5 1316 aa14.83□□□□□ -0.04
PCM1-203ENST00000517545 CWC27Q6UX04 472 aaKnown RBP14.82□□□□□ -0.04
PCM1-203ENST00000517545 CHMP3Q9Y3E7 222 aa14.82□□□□□ -0.04
PCM1-203ENST00000517545 C3P01024 1663 aa14.82□□□□□ -0.04
PCM1-203ENST00000517545 SURF6O75683 361 aaKnown RBP14.82□□□□□ -0.04
PCM1-203ENST00000517545 CASTP20810 708 aaKnown RBP14.82□□□□□ -0.04
PCM1-203ENST00000517545 DDX54Q8TDD1 881 aaKnown RBP14.82□□□□□ -0.04
PCM1-203ENST00000517545 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.82□□□□□ -0.04
PCM1-203ENST00000517545 MON2Q7Z3U7 1717 aa14.82□□□□□ -0.04
PCM1-203ENST00000517545 SOS1Q07889 1333 aaPredicted RBP14.82□□□□□ -0.04
PCM1-203ENST00000517545 A2ML1A8K2U0 1454 aa14.82□□□□□ -0.04
PCM1-203ENST00000517545 GJB2P29033 226 aa14.82□□□□□ -0.04
PCM1-203ENST00000517545 PDCL2Q8N4E4 241 aa14.82□□□□□ -0.04
PCM1-203ENST00000517545 MTMR6Q9Y217 621 aa14.82□□□□□ -0.04
PCM1-203ENST00000517545 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
PCM1-203ENST00000517545 UBTFL1P0CB47 393 aaPredicted RBP14.81□□□□□ -0.04
PCM1-203ENST00000517545 U2AF2P26368 475 aaKnown RBP eCLIP14.81□□□□□ -0.04
PCM1-203ENST00000517545 AOX1Q06278 1338 aa14.81□□□□□ -0.04
PCM1-203ENST00000517545 PPP1R42Q7Z4L9 355 aa14.8□□□□□ -0.04
PCM1-203ENST00000517545 SETD1AO15047 1707 aaKnown RBP14.8□□□□□ -0.04
PCM1-203ENST00000517545 RIMS1Q86UR5 1692 aaKnown RBP14.8□□□□□ -0.04
PCM1-203ENST00000517545 PTGS1P23219 599 aa14.8□□□□□ -0.04
PCM1-203ENST00000517545 ADCK5Q3MIX3 580 aa14.8□□□□□ -0.04
PCM1-203ENST00000517545 CCDC30Q5VVM6 783 aa14.8□□□□□ -0.04
PCM1-203ENST00000517545 HYPKQ9NX55 129 aa14.8□□□□□ -0.04
PCM1-203ENST00000517545 PEAK1Q9H792 1746 aa14.8□□□□□ -0.04
PCM1-203ENST00000517545 VPS37CA5D8V6 355 aaPredicted RBP14.8□□□□□ -0.04
PCM1-203ENST00000517545 RHPN1Q8TCX5 695 aa14.8□□□□□ -0.04
PCM1-203ENST00000517545 SSH3Q8TE77 659 aa14.8□□□□□ -0.04
PCM1-203ENST00000517545 ATP6V1DQ9Y5K8 247 aa14.8□□□□□ -0.04
PCM1-203ENST00000517545 EPB41L2O43491 1005 aaKnown RBP14.79□□□□□ -0.04
PCM1-203ENST00000517545 ST3GAL1Q11201 340 aa14.79□□□□□ -0.04
PCM1-203ENST00000517545 ARHGEF10O15013 1369 aa14.79□□□□□ -0.04
PCM1-203ENST00000517545 ACEP12821 1306 aa14.79□□□□□ -0.04
PCM1-203ENST00000517545 CAMK4Q16566 473 aa14.79□□□□□ -0.04
PCM1-203ENST00000517545 DIAPH3Q9NSV4 1193 aa14.79□□□□□ -0.04
PCM1-203ENST00000517545 IGSF3O75054 1194 aa14.79□□□□□ -0.04
PCM1-203ENST00000517545 CHAF1AQ13111 956 aaPredicted RBP14.79□□□□□ -0.04
PCM1-203ENST00000517545 FAM173BQ6P4H8 233 aa14.79□□□□□ -0.04
PCM1-203ENST00000517545 PTH1RQ03431 593 aa14.78□□□□□ -0.04
PCM1-203ENST00000517545 LUZP1Q86V48 1076 aa14.78□□□□□ -0.04
PCM1-203ENST00000517545 NECAB1Q8N987 351 aa14.78□□□□□ -0.04
PCM1-203ENST00000517545 ANKRD7Q92527 254 aa14.78□□□□□ -0.04
PCM1-203ENST00000517545 CCDC192P0DO97 292 aa14.78□□□□□ -0.04
PCM1-203ENST00000517545 JAKMIP1Q96N16 626 aaKnown RBP14.78□□□□□ -0.04
PCM1-203ENST00000517545 PHAXQ9H814 394 aaKnown RBP14.78□□□□□ -0.04
PCM1-203ENST00000517545 OVOS2A0A0J9YW53 1432 aa14.78□□□□□ -0.04
PCM1-203ENST00000517545 OVOS2Q6IE36 1432 aa14.78□□□□□ -0.04
PCM1-203ENST00000517545 LRMPQ12912 555 aa14.78□□□□□ -0.04
PCM1-203ENST00000517545 FERMT3Q86UX7 667 aa14.78□□□□□ -0.04
PCM1-203ENST00000517545 LIG1P18858 919 aa14.77□□□□□ -0.04
PCM1-203ENST00000517545 CNTROBQ8N137 903 aa14.77□□□□□ -0.04
PCM1-203ENST00000517545 SRGAP3O43295 1099 aa14.77□□□□□ -0.05
PCM1-203ENST00000517545 COL9A3Q14050 684 aaPredicted RBP14.77□□□□□ -0.05
PCM1-203ENST00000517545 PRPF40BQ6NWY9 871 aaKnown RBP14.77□□□□□ -0.05
PCM1-203ENST00000517545 TTC6Q86TZ1 520 aa14.77□□□□□ -0.05
PCM1-203ENST00000517545 PDRG1Q9NUG6 133 aa14.77□□□□□ -0.05
PCM1-203ENST00000517545 CTIFO43310 598 aaKnown RBP14.76□□□□□ -0.05
PCM1-203ENST00000517545 EYA1Q99502 592 aa14.76□□□□□ -0.05
PCM1-203ENST00000517545 RGPD1P0DJD0 1748 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms