RNA–Protein interactions for RNA: ENST00000517504.5

TNIP1-204, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5

Gene TNIP1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-204ENST00000517504 TRAPPC3LQ5T215 181 aa9.81□□□□□ -0.84
TNIP1-204ENST00000517504 INTS5Q6P9B9 1019 aaKnown RBP9.81□□□□□ -0.84
TNIP1-204ENST00000517504 DNAJC10Q8IXB1 793 aa9.81□□□□□ -0.84
TNIP1-204ENST00000517504 GAS2L2Q8NHY3 880 aa9.81□□□□□ -0.84
TNIP1-204ENST00000517504 PHACTR3Q96KR7 559 aa9.81□□□□□ -0.84
TNIP1-204ENST00000517504 GNAT3A8MTJ3 354 aa9.8□□□□□ -0.84
TNIP1-204ENST00000517504 IL17REQ8NFR9 667 aa9.8□□□□□ -0.84
TNIP1-204ENST00000517504 ANKRD31Q8N7Z5 1873 aa9.8□□□□□ -0.84
TNIP1-204ENST00000517504 SOS1Q07889 1333 aaPredicted RBP9.8□□□□□ -0.84
TNIP1-204ENST00000517504 USP42Q9H9J4 1324 aaKnown RBP9.8□□□□□ -0.84
TNIP1-204ENST00000517504 COL15A1P39059 1388 aa9.79□□□□□ -0.84
TNIP1-204ENST00000517504 U2AF1L5P0DN76 240 aaPredicted RBP9.79□□□□□ -0.84
TNIP1-204ENST00000517504 CYP19A1P11511 503 aaPredicted RBP9.79□□□□□ -0.84
TNIP1-204ENST00000517504 RFC4P35249 363 aa9.79□□□□□ -0.84
TNIP1-204ENST00000517504 U2AF1Q01081 240 aaKnown RBP eCLIP9.79□□□□□ -0.84
TNIP1-204ENST00000517504 ZNF784Q8NCA9 323 aaPredicted RBP9.79□□□□□ -0.84
TNIP1-204ENST00000517504 CCDC87Q9NVE4 849 aa9.79□□□□□ -0.84
TNIP1-204ENST00000517504 SRP68Q9UHB9 627 aaKnown RBP9.79□□□□□ -0.84
TNIP1-204ENST00000517504 NLGN1Q8N2Q7 840 aa9.78□□□□□ -0.84
TNIP1-204ENST00000517504 NUDCQ9Y266 331 aa9.78□□□□□ -0.84
TNIP1-204ENST00000517504 ZBTB1Q9Y2K1 713 aa9.78□□□□□ -0.84
TNIP1-204ENST00000517504 SBF1O95248 1867 aa9.78□□□□□ -0.84
TNIP1-204ENST00000517504 HEG1Q9ULI3 1381 aa9.77□□□□□ -0.84
TNIP1-204ENST00000517504 CACNA1SQ13698 1873 aa9.77□□□□□ -0.85
TNIP1-204ENST00000517504 COL11A2P13942 1736 aaPredicted RBP9.77□□□□□ -0.85
TNIP1-204ENST00000517504 GRIN3BO60391 1043 aa9.77□□□□□ -0.85
TNIP1-204ENST00000517504 DDR1Q08345 913 aa9.77□□□□□ -0.85
TNIP1-204ENST00000517504 TEFQ10587 303 aa9.77□□□□□ -0.85
TNIP1-204ENST00000517504 ZNF790Q6PG37 636 aa9.77□□□□□ -0.85
TNIP1-204ENST00000517504 ZNF496Q96IT1 587 aaPredicted RBP9.77□□□□□ -0.85
TNIP1-204ENST00000517504 WWC3Q9ULE0 1092 aa9.77□□□□□ -0.85
TNIP1-204ENST00000517504 ADCY9O60503 1353 aa9.76□□□□□ -0.85
TNIP1-204ENST00000517504 FCHSD2O94868 740 aa9.76□□□□□ -0.85
TNIP1-204ENST00000517504 TTC5Q8N0Z6 440 aa9.76□□□□□ -0.85
TNIP1-204ENST00000517504 CCDC88AQ3V6T2 1871 aa9.76□□□□□ -0.85
TNIP1-204ENST00000517504 USPL1Q5W0Q7 1092 aa9.75□□□□□ -0.85
TNIP1-204ENST00000517504 MCM10Q7L590 875 aa9.75□□□□□ -0.85
TNIP1-204ENST00000517504 PARP3Q9Y6F1 533 aa9.75□□□□□ -0.85
TNIP1-204ENST00000517504 ATP10DQ9P241 1426 aa9.74□□□□□ -0.85
TNIP1-204ENST00000517504 ARFGEF2Q9Y6D5 1785 aa9.74□□□□□ -0.85
TNIP1-204ENST00000517504 POLRMTO00411 1230 aaKnown RBP9.74□□□□□ -0.85
TNIP1-204ENST00000517504 KCNQ3O43525 872 aa9.74□□□□□ -0.85
TNIP1-204ENST00000517504 NBR1Q14596 966 aa9.74□□□□□ -0.85
TNIP1-204ENST00000517504 BCL2L12Q9HB09 334 aa9.74□□□□□ -0.85
TNIP1-204ENST00000517504 NARFQ9UHQ1 456 aa9.74□□□□□ -0.85
TNIP1-204ENST00000517504 NUP98P52948 1817 aa9.74□□□□□ -0.85
TNIP1-204ENST00000517504 A0A0G2JLW4 131 aa9.73□□□□□ -0.85
TNIP1-204ENST00000517504 BTBD11A6QL63 1104 aa9.73□□□□□ -0.85
TNIP1-204ENST00000517504 ZPR1O75312 459 aa9.73□□□□□ -0.85
TNIP1-204ENST00000517504 STARD3NLO95772 234 aa9.73□□□□□ -0.85
TNIP1-204ENST00000517504 DPEP1P16444 411 aa9.73□□□□□ -0.85
TNIP1-204ENST00000517504 CANXP27824 592 aaKnown RBP9.73□□□□□ -0.85
TNIP1-204ENST00000517504 TM4SF1P30408 202 aa9.73□□□□□ -0.85
TNIP1-204ENST00000517504 EIF5P55010 431 aaKnown RBP9.73□□□□□ -0.85
TNIP1-204ENST00000517504 TGFB2P61812 414 aa9.73□□□□□ -0.85
TNIP1-204ENST00000517504 DCTN1Q14203 1278 aa9.73□□□□□ -0.85
TNIP1-204ENST00000517504 FMNL2Q96PY5 1086 aa9.73□□□□□ -0.85
TNIP1-204ENST00000517504 PLEKHF1Q96S99 279 aa9.73□□□□□ -0.85
TNIP1-204ENST00000517504 CARMIL3Q8ND23 1372 aa9.73□□□□□ -0.85
TNIP1-204ENST00000517504 HTATSF1O43719 755 aaKnown RBP9.72□□□□□ -0.85
TNIP1-204ENST00000517504 NFIXQ14938 502 aa9.72□□□□□ -0.85
TNIP1-204ENST00000517504 RTF1Q92541 710 aaKnown RBP9.72□□□□□ -0.85
TNIP1-204ENST00000517504 TIAM2Q8IVF5 1701 aa9.71□□□□□ -0.85
TNIP1-204ENST00000517504 FER1L6Q2WGJ9 1857 aa9.71□□□□□ -0.85
TNIP1-204ENST00000517504 PRAMEF22A3QJZ6 481 aa9.71□□□□□ -0.86
TNIP1-204ENST00000517504 KCNA3P22001 575 aa9.71□□□□□ -0.86
TNIP1-204ENST00000517504 DDX10Q13206 875 aaKnown RBP9.71□□□□□ -0.86
TNIP1-204ENST00000517504 RALBP1Q15311 655 aa9.71□□□□□ -0.86
TNIP1-204ENST00000517504 TEX13AQ9BXU3 409 aaPredicted RBP9.71□□□□□ -0.86
TNIP1-204ENST00000517504 DICER1Q9UPY3 1922 aaKnown RBP9.71□□□□□ -0.86
TNIP1-204ENST00000517504 A1BGP04217 495 aa9.7□□□□□ -0.86
TNIP1-204ENST00000517504 IL6STP40189 918 aaPredicted RBP9.7□□□□□ -0.86
TNIP1-204ENST00000517504 BCS1LQ9Y276 419 aa9.7□□□□□ -0.86
TNIP1-204ENST00000517504 MYBBP1AQ9BQG0 1328 aaKnown RBP9.7□□□□□ -0.86
TNIP1-204ENST00000517504 SLX4Q8IY92 1834 aa9.7□□□□□ -0.86
TNIP1-204ENST00000517504 A0A087WZG4 1122 aa9.69□□□□□ -0.86
TNIP1-204ENST00000517504 CAMTA2O94983 1202 aa9.69□□□□□ -0.86
TNIP1-204ENST00000517504 CHRNA5P30532 468 aa9.69□□□□□ -0.86
TNIP1-204ENST00000517504 PIP4K2AP48426 406 aaPredicted RBP9.69□□□□□ -0.86
TNIP1-204ENST00000517504 NFE2L2Q16236 605 aa9.69□□□□□ -0.86
TNIP1-204ENST00000517504 ANKRD36CQ5JPF3 1778 aa9.69□□□□□ -0.86
TNIP1-204ENST00000517504 TBC1D9BQ66K14 1250 aa9.69□□□□□ -0.86
TNIP1-204ENST00000517504 THUMPD2Q9BTF0 503 aaKnown RBP9.69□□□□□ -0.86
TNIP1-204ENST00000517504 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.69□□□□□ -0.86
TNIP1-204ENST00000517504 TBC1D2BQ9UPU7 963 aa9.69□□□□□ -0.86
TNIP1-204ENST00000517504 ZNF330Q9Y3S2 320 aaPredicted RBP9.69□□□□□ -0.86
TNIP1-204ENST00000517504 USP16Q9Y5T5 823 aa9.69□□□□□ -0.86
TNIP1-204ENST00000517504 TNRC6CQ9HCJ0 1690 aaKnown RBP9.68□□□□□ -0.86
TNIP1-204ENST00000517504 MAPK8IP3Q9UPT6 1336 aa9.68□□□□□ -0.86
TNIP1-204ENST00000517504 SERPINB2P05120 415 aa9.68□□□□□ -0.86
TNIP1-204ENST00000517504 NEFMP07197 916 aa9.68□□□□□ -0.86
TNIP1-204ENST00000517504 SNRPA1P09661 255 aaKnown RBP9.68□□□□□ -0.86
TNIP1-204ENST00000517504 TAF7Q15545 349 aaPredicted RBP9.68□□□□□ -0.86
TNIP1-204ENST00000517504 BICDL1Q6ZP65 573 aa9.68□□□□□ -0.86
TNIP1-204ENST00000517504 MIS18AQ9NYP9 233 aa9.68□□□□□ -0.86
TNIP1-204ENST00000517504 CEP350Q5VT06 3117 aa9.68□□□□□ -0.86
TNIP1-204ENST00000517504 NBPF26B4DH59 902 aa9.67□□□□□ -0.86
TNIP1-204ENST00000517504 GIGYF1O75420 1035 aaPredicted RBP9.67□□□□□ -0.86
TNIP1-204ENST00000517504 NBPF10Q6P3W6 841 aaKnown RBP9.67□□□□□ -0.86
TNIP1-204ENST00000517504 DZIP3Q86Y13 1208 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms