RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 ERVK-9P63128 1117 aa9.07□□□□□ -0.96
CPNE3-202ENST00000517391 OCLNQ16625 522 aa9.07□□□□□ -0.96
CPNE3-202ENST00000517391 FOXD4L5Q5VV16 416 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-202ENST00000517391 FOXD4L4Q8WXT5 416 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-202ENST00000517391 SOWAHDA6NJG2 315 aa9.06□□□□□ -0.96
CPNE3-202ENST00000517391 PHF20L1A8MW92 1017 aa9.06□□□□□ -0.96
CPNE3-202ENST00000517391 K7ELQ4 463 aaPredicted RBP9.06□□□□□ -0.96
CPNE3-202ENST00000517391 ERCC3P19447 782 aa9.06□□□□□ -0.96
CPNE3-202ENST00000517391 CCDC155Q8N6L0 562 aa9.06□□□□□ -0.96
CPNE3-202ENST00000517391 DCAF5Q96JK2 942 aa9.06□□□□□ -0.96
CPNE3-202ENST00000517391 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
CPNE3-202ENST00000517391 TSEN34Q9BSV6 310 aaKnown RBP9.06□□□□□ -0.96
CPNE3-202ENST00000517391 PGPEP1Q9NXJ5 209 aa9.06□□□□□ -0.96
CPNE3-202ENST00000517391 BACH1O14867 736 aa9.05□□□□□ -0.96
CPNE3-202ENST00000517391 KRTAP1-3Q8IUG1 177 aa9.05□□□□□ -0.96
CPNE3-202ENST00000517391 ENAMQ9NRM1 1142 aa9.05□□□□□ -0.96
CPNE3-202ENST00000517391 TMPRSS4Q9NRS4 437 aa9.05□□□□□ -0.96
CPNE3-202ENST00000517391 EGFL7Q9UHF1 273 aa9.05□□□□□ -0.96
CPNE3-202ENST00000517391 TTLL8A6PVC2 850 aa9.04□□□□□ -0.96
CPNE3-202ENST00000517391 WEE1P30291 646 aa9.04□□□□□ -0.96
CPNE3-202ENST00000517391 SCTRP47872 440 aa9.04□□□□□ -0.96
CPNE3-202ENST00000517391 SERPINB4P48594 390 aa9.04□□□□□ -0.96
CPNE3-202ENST00000517391 CBLBQ13191 982 aa9.04□□□□□ -0.96
CPNE3-202ENST00000517391 SV2AQ7L0J3 742 aa9.04□□□□□ -0.96
CPNE3-202ENST00000517391 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
CPNE3-202ENST00000517391 WASLO00401 505 aaPredicted RBP9.03□□□□□ -0.96
CPNE3-202ENST00000517391 PROCP04070 461 aa9.03□□□□□ -0.96
CPNE3-202ENST00000517391 TSEN2Q8NCE0 465 aaKnown RBP9.03□□□□□ -0.96
CPNE3-202ENST00000517391 ZNF358Q9NW07 568 aa9.03□□□□□ -0.96
CPNE3-202ENST00000517391 PTCD1O75127 700 aaKnown RBP9.02□□□□□ -0.97
CPNE3-202ENST00000517391 LYPD4Q6UWN0 246 aa9.02□□□□□ -0.97
CPNE3-202ENST00000517391 VWA5B2Q8N398 1253 aa9.02□□□□□ -0.97
CPNE3-202ENST00000517391 OSBPL3Q9H4L5 887 aa9.02□□□□□ -0.97
CPNE3-202ENST00000517391 TMEM229AB2RXF0 380 aa9.01□□□□□ -0.97
CPNE3-202ENST00000517391 ADAMTS2O95450 1211 aa9.01□□□□□ -0.97
CPNE3-202ENST00000517391 ITGB2P05107 769 aa9.01□□□□□ -0.97
CPNE3-202ENST00000517391 RBM25P49756 843 aaKnown RBP9.01□□□□□ -0.97
CPNE3-202ENST00000517391 ZNF784Q8NCA9 323 aaPredicted RBP9.01□□□□□ -0.97
CPNE3-202ENST00000517391 GAS2L2Q8NHY3 880 aa9.01□□□□□ -0.97
CPNE3-202ENST00000517391 COL26A1Q96A83 441 aa9.01□□□□□ -0.97
CPNE3-202ENST00000517391 CDC14CA4D256 554 aa9□□□□□ -0.97
CPNE3-202ENST00000517391 GNRH1P01148 92 aa9□□□□□ -0.97
CPNE3-202ENST00000517391 IGFBP4P22692 258 aa9□□□□□ -0.97
CPNE3-202ENST00000517391 ITGA6P23229 1130 aa9□□□□□ -0.97
CPNE3-202ENST00000517391 GDF10P55107 478 aa9□□□□□ -0.97
CPNE3-202ENST00000517391 CYP2U1Q7Z449 544 aa9□□□□□ -0.97
CPNE3-202ENST00000517391 CYLDQ9NQC7 956 aa9□□□□□ -0.97
CPNE3-202ENST00000517391 BIN2Q9UBW5 565 aaPredicted RBP9□□□□□ -0.97
CPNE3-202ENST00000517391 SLC35F4A4IF30 521 aa8.99□□□□□ -0.97
CPNE3-202ENST00000517391 FOXO3O43524 673 aa8.99□□□□□ -0.97
CPNE3-202ENST00000517391 ABL1P00519 1130 aa8.99□□□□□ -0.97
CPNE3-202ENST00000517391 INHAP05111 366 aa8.99□□□□□ -0.97
CPNE3-202ENST00000517391 SCNN1AP37088 669 aa8.99□□□□□ -0.97
CPNE3-202ENST00000517391 SRSF11Q05519 484 aaKnown RBP8.99□□□□□ -0.97
CPNE3-202ENST00000517391 ESCO1Q5FWF5 840 aa8.99□□□□□ -0.97
CPNE3-202ENST00000517391 Q6ZVU0 165 aa8.99□□□□□ -0.97
CPNE3-202ENST00000517391 BEND7Q8N7W2 519 aaPredicted RBP8.99□□□□□ -0.97
CPNE3-202ENST00000517391 AGBL1Q96MI9 1066 aa8.99□□□□□ -0.97
CPNE3-202ENST00000517391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.99□□□□□ -0.97
CPNE3-202ENST00000517391 FIGNL2A6NMB9 653 aa8.98□□□□□ -0.97
CPNE3-202ENST00000517391 E9PSI1 815 aa8.98□□□□□ -0.97
CPNE3-202ENST00000517391 ICMTO60725 284 aa8.98□□□□□ -0.97
CPNE3-202ENST00000517391 LILRA1O75019 489 aa8.98□□□□□ -0.97
CPNE3-202ENST00000517391 CELA2BP08218 269 aaPredicted RBP8.98□□□□□ -0.97
CPNE3-202ENST00000517391 ADD1P35611 737 aaKnown RBP8.98□□□□□ -0.97
CPNE3-202ENST00000517391 SCNN1DP51172 638 aa8.98□□□□□ -0.97
CPNE3-202ENST00000517391 SF3B2Q13435 895 aaKnown RBP8.98□□□□□ -0.97
CPNE3-202ENST00000517391 SLC4A9Q96Q91 983 aa8.98□□□□□ -0.97
CPNE3-202ENST00000517391 FKBP4Q02790 459 aaKnown RBP eCLIP8.97□□□□□ -0.97
CPNE3-202ENST00000517391 FKBP5Q13451 457 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-202ENST00000517391 PODNQ7Z5L7 613 aa8.97□□□□□ -0.97
CPNE3-202ENST00000517391 GTF3C2Q8WUA4 911 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-202ENST00000517391 ATAD2Q6PL18 1390 aa8.97□□□□□ -0.97
CPNE3-202ENST00000517391 LGR5O75473 907 aa8.96□□□□□ -0.98
CPNE3-202ENST00000517391 RELBQ01201 579 aa8.96□□□□□ -0.98
CPNE3-202ENST00000517391 GLYCTKQ8IVS8 523 aa8.96□□□□□ -0.98
CPNE3-202ENST00000517391 SCG3Q8WXD2 468 aaKnown RBP8.96□□□□□ -0.98
CPNE3-202ENST00000517391 C21orf2O43822 256 aa8.95□□□□□ -0.98
CPNE3-202ENST00000517391 DNAJC14Q6Y2X3 702 aaPredicted RBP8.95□□□□□ -0.98
CPNE3-202ENST00000517391 TNS4Q8IZW8 715 aa8.95□□□□□ -0.98
CPNE3-202ENST00000517391 VTI1AQ96AJ9 217 aa8.95□□□□□ -0.98
CPNE3-202ENST00000517391 MKNK1Q9BUB5 465 aa8.95□□□□□ -0.98
CPNE3-202ENST00000517391 ETNK1Q9HBU6 452 aa8.95□□□□□ -0.98
CPNE3-202ENST00000517391 SERTAD1Q9UHV2 236 aa8.95□□□□□ -0.98
CPNE3-202ENST00000517391 CNTNAP5Q8WYK1 1306 aa8.95□□□□□ -0.98
CPNE3-202ENST00000517391 H3BRB1 525 aa8.94□□□□□ -0.98
CPNE3-202ENST00000517391 TUT1Q9H6E5 874 aaKnown RBP8.94□□□□□ -0.98
CPNE3-202ENST00000517391 ZNF395Q9H8N7 513 aaPredicted RBP8.94□□□□□ -0.98
CPNE3-202ENST00000517391 SEPT3Q9UH03 358 aa8.94□□□□□ -0.98
CPNE3-202ENST00000517391 RBM47A0AV96 593 aaKnown RBP8.93□□□□□ -0.98
CPNE3-202ENST00000517391 ADH1AP07327 375 aa8.93□□□□□ -0.98
CPNE3-202ENST00000517391 EPHA4P54764 986 aa8.93□□□□□ -0.98
CPNE3-202ENST00000517391 ZNF211Q13398 564 aaPredicted RBP8.93□□□□□ -0.98
CPNE3-202ENST00000517391 ZNF428Q96B54 188 aa8.93□□□□□ -0.98
CPNE3-202ENST00000517391 XAGE2Q96GT9 111 aa8.93□□□□□ -0.98
CPNE3-202ENST00000517391 A6NJY4 79 aa8.92□□□□□ -0.98
CPNE3-202ENST00000517391 BAG6P46379 1132 aa8.92□□□□□ -0.98
CPNE3-202ENST00000517391 SMTNP53814 917 aa8.92□□□□□ -0.98
CPNE3-202ENST00000517391 STAG2Q8N3U4 1231 aa8.92□□□□□ -0.98
CPNE3-202ENST00000517391 KDF1Q8NAX2 398 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms