RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 NCAPD2Q15021 1401 aa9.9□□□□□ -0.83
TNFRSF11B-202ENST00000517352 KIF3CO14782 793 aa9.89□□□□□ -0.83
TNFRSF11B-202ENST00000517352 NEFMP07197 916 aa9.89□□□□□ -0.83
TNFRSF11B-202ENST00000517352 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
TNFRSF11B-202ENST00000517352 CFAP53Q96M91 514 aa9.89□□□□□ -0.83
TNFRSF11B-202ENST00000517352 LGR6Q9HBX8 967 aa9.89□□□□□ -0.83
TNFRSF11B-202ENST00000517352 NMRK2Q9NPI5 230 aa9.89□□□□□ -0.83
TNFRSF11B-202ENST00000517352 PXDNLA1KZ92 1463 aa9.89□□□□□ -0.83
TNFRSF11B-202ENST00000517352 CICQ96RK0 1608 aaPredicted RBP9.89□□□□□ -0.83
TNFRSF11B-202ENST00000517352 TUBGCP6Q96RT7 1819 aa9.89□□□□□ -0.83
TNFRSF11B-202ENST00000517352 ADCY9O60503 1353 aa9.88□□□□□ -0.83
TNFRSF11B-202ENST00000517352 KDRP35968 1356 aa9.88□□□□□ -0.83
TNFRSF11B-202ENST00000517352 RNMTO43148 476 aaKnown RBP9.88□□□□□ -0.83
TNFRSF11B-202ENST00000517352 INTS5Q6P9B9 1019 aaKnown RBP9.88□□□□□ -0.83
TNFRSF11B-202ENST00000517352 C2CD5Q86YS7 1000 aa9.88□□□□□ -0.83
TNFRSF11B-202ENST00000517352 GAS2L2Q8NHY3 880 aa9.88□□□□□ -0.83
TNFRSF11B-202ENST00000517352 RTF1Q92541 710 aaKnown RBP9.88□□□□□ -0.83
TNFRSF11B-202ENST00000517352 ZNF622Q969S3 477 aaKnown RBP eCLIP9.88□□□□□ -0.83
TNFRSF11B-202ENST00000517352 TEX13AQ9BXU3 409 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF11B-202ENST00000517352 RRAGCQ9HB90 399 aa9.88□□□□□ -0.83
TNFRSF11B-202ENST00000517352 NARFQ9UHQ1 456 aa9.88□□□□□ -0.83
TNFRSF11B-202ENST00000517352 PKD1L3Q7Z443 1732 aa9.87□□□□□ -0.83
TNFRSF11B-202ENST00000517352 SERPINB2P05120 415 aa9.87□□□□□ -0.83
TNFRSF11B-202ENST00000517352 MTHFSDQ2M296 383 aaKnown RBP9.87□□□□□ -0.83
TNFRSF11B-202ENST00000517352 DPY19L2Q6NUT2 758 aa9.87□□□□□ -0.83
TNFRSF11B-202ENST00000517352 TTLL6Q8N841 843 aa9.87□□□□□ -0.83
TNFRSF11B-202ENST00000517352 RBM46Q8TBY0 533 aaKnown RBP9.87□□□□□ -0.83
TNFRSF11B-202ENST00000517352 NUDCQ9Y266 331 aa9.87□□□□□ -0.83
TNFRSF11B-202ENST00000517352 KDM6AO15550 1401 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF11B-202ENST00000517352 C10orf71Q711Q0 1435 aa9.87□□□□□ -0.83
TNFRSF11B-202ENST00000517352 GNAT3A8MTJ3 354 aa9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 POLRMTO00411 1230 aaKnown RBP9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 ZBTB22O15209 634 aa9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 CYP19A1P11511 503 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 LMNB1P20700 586 aa9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 PDE6BP35913 854 aa9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 DDR1Q08345 913 aa9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 FSTL1Q12841 308 aa9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 SMC1BQ8NDV3 1235 aa9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 TOGARAM1Q9Y4F4 1720 aa9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 ITGB4P16144 1822 aa9.86□□□□□ -0.83
TNFRSF11B-202ENST00000517352 MAP2P11137 1827 aaKnown RBP9.85□□□□□ -0.83
TNFRSF11B-202ENST00000517352 GTF2E1P29083 439 aaPredicted RBP9.85□□□□□ -0.83
TNFRSF11B-202ENST00000517352 ST5P78524 1137 aa9.85□□□□□ -0.83
TNFRSF11B-202ENST00000517352 NFIXQ14938 502 aa9.85□□□□□ -0.83
TNFRSF11B-202ENST00000517352 FMNL2Q96PY5 1086 aa9.85□□□□□ -0.83
TNFRSF11B-202ENST00000517352 SETDB2Q96T68 719 aa9.85□□□□□ -0.83
TNFRSF11B-202ENST00000517352 PDZRN3Q9UPQ7 1066 aa9.85□□□□□ -0.83
TNFRSF11B-202ENST00000517352 ZBTB1Q9Y2K1 713 aa9.85□□□□□ -0.83
TNFRSF11B-202ENST00000517352 COL15A1P39059 1388 aa9.85□□□□□ -0.83
TNFRSF11B-202ENST00000517352 COL24A1Q17RW2 1714 aa9.85□□□□□ -0.83
TNFRSF11B-202ENST00000517352 SOS1Q07889 1333 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF11B-202ENST00000517352 KIF7Q2M1P5 1343 aa9.84□□□□□ -0.83
TNFRSF11B-202ENST00000517352 BTBD11A6QL63 1104 aa9.84□□□□□ -0.83
TNFRSF11B-202ENST00000517352 VEGFAP15692 232 aaPredicted RBP9.84□□□□□ -0.83
TNFRSF11B-202ENST00000517352 KCNA3P22001 575 aa9.84□□□□□ -0.83
TNFRSF11B-202ENST00000517352 TM4SF1P30408 202 aa9.84□□□□□ -0.83
TNFRSF11B-202ENST00000517352 TBC1D2BQ9UPU7 963 aa9.84□□□□□ -0.83
TNFRSF11B-202ENST00000517352 TAF1LQ8IZX4 1826 aa9.84□□□□□ -0.83
TNFRSF11B-202ENST00000517352 UBR3Q6ZT12 1888 aa9.83□□□□□ -0.84
TNFRSF11B-202ENST00000517352 RASSF7Q02833 373 aa9.83□□□□□ -0.84
TNFRSF11B-202ENST00000517352 CNBD1Q8NA66 436 aa9.83□□□□□ -0.84
TNFRSF11B-202ENST00000517352 ZNF652Q9Y2D9 606 aa9.83□□□□□ -0.84
TNFRSF11B-202ENST00000517352 ZBTB12Q9Y330 459 aaPredicted RBP9.83□□□□□ -0.84
TNFRSF11B-202ENST00000517352 U2AF1L5P0DN76 240 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF11B-202ENST00000517352 U2AF1Q01081 240 aaKnown RBP eCLIP9.82□□□□□ -0.84
TNFRSF11B-202ENST00000517352 ERFEQ4G0M1 354 aa9.82□□□□□ -0.84
TNFRSF11B-202ENST00000517352 ZNF790Q6PG37 636 aa9.82□□□□□ -0.84
TNFRSF11B-202ENST00000517352 HOMEZQ8IX15 550 aa9.82□□□□□ -0.84
TNFRSF11B-202ENST00000517352 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
TNFRSF11B-202ENST00000517352 GLTPD2A6NH11 291 aa9.81□□□□□ -0.84
TNFRSF11B-202ENST00000517352 C21orf2O43822 256 aa9.81□□□□□ -0.84
TNFRSF11B-202ENST00000517352 IL6STP40189 918 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-202ENST00000517352 SOGA3Q5TF21 947 aa9.81□□□□□ -0.84
TNFRSF11B-202ENST00000517352 NBPF5PQ86XG9 351 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-202ENST00000517352 CCDC24Q8N4L8 307 aa9.81□□□□□ -0.84
TNFRSF11B-202ENST00000517352 CNKSR1Q969H4 720 aa9.81□□□□□ -0.84
TNFRSF11B-202ENST00000517352 ZNF496Q96IT1 587 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-202ENST00000517352 BRIP1Q9BX63 1249 aa9.81□□□□□ -0.84
TNFRSF11B-202ENST00000517352 TMX4Q9H1E5 349 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF11B-202ENST00000517352 C4AP0C0L4 1744 aa9.81□□□□□ -0.84
TNFRSF11B-202ENST00000517352 ANKRD26Q9UPS8 1709 aa9.8□□□□□ -0.84
TNFRSF11B-202ENST00000517352 TULP1O00294 542 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF11B-202ENST00000517352 PRKAR2BP31323 418 aa9.8□□□□□ -0.84
TNFRSF11B-202ENST00000517352 HTRA3P83110 453 aa9.8□□□□□ -0.84
TNFRSF11B-202ENST00000517352 TBC1D9BQ66K14 1250 aa9.8□□□□□ -0.84
TNFRSF11B-202ENST00000517352 DZIP3Q86Y13 1208 aaKnown RBP9.8□□□□□ -0.84
TNFRSF11B-202ENST00000517352 KLRG1Q96E93 195 aa9.8□□□□□ -0.84
TNFRSF11B-202ENST00000517352 TAOK3Q9H2K8 898 aa9.8□□□□□ -0.84
TNFRSF11B-202ENST00000517352 KCPQ6ZWJ8 1503 aa9.8□□□□□ -0.84
TNFRSF11B-202ENST00000517352 CARMIL3Q8ND23 1372 aa9.79□□□□□ -0.84
TNFRSF11B-202ENST00000517352 FAM177BA6PVY3 158 aa9.79□□□□□ -0.84
TNFRSF11B-202ENST00000517352 ATXN8OSP0DMR3 200 aa9.79□□□□□ -0.84
TNFRSF11B-202ENST00000517352 EIF5P55010 431 aaKnown RBP9.79□□□□□ -0.84
TNFRSF11B-202ENST00000517352 HEG1Q9ULI3 1381 aa9.78□□□□□ -0.84
TNFRSF11B-202ENST00000517352 A1BGP04217 495 aa9.78□□□□□ -0.84
TNFRSF11B-202ENST00000517352 SNRPA1P09661 255 aaKnown RBP9.78□□□□□ -0.84
TNFRSF11B-202ENST00000517352 TPTE2Q6XPS3 522 aa9.78□□□□□ -0.84
TNFRSF11B-202ENST00000517352 IL17REQ8NFR9 667 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms