RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 C8orf58Q8NAV2 365 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ZNF428Q96B54 188 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 CDCA7LQ96GN5 454 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 HYPKQ9NX55 129 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 DBF4Q9UBU7 674 aaPredicted RBP6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 USP16Q9Y5T5 823 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 SBF2Q86WG5 1849 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ERBB4Q15303 1308 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ZNF521Q96K83 1311 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 NPHP1O15259 732 aa6.97□□□□□ -1.29
SCARNA16.4-201ENST00000516956 RPS6KA4O75676 772 aa6.97□□□□□ -1.29
SCARNA16.4-201ENST00000516956 A1BGP04217 495 aa6.97□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ADRA2BP18089 450 aa6.97□□□□□ -1.29
SCARNA16.4-201ENST00000516956 AIMP1Q12904 312 aaKnown RBP6.97□□□□□ -1.29
SCARNA16.4-201ENST00000516956 SLC15A2Q16348 729 aa6.97□□□□□ -1.29
SCARNA16.4-201ENST00000516956 LINC00116Q8NCU8 138 aa6.97□□□□□ -1.29
SCARNA16.4-201ENST00000516956 LRRC4BQ9NT99 713 aa6.97□□□□□ -1.29
SCARNA16.4-201ENST00000516956 CNTNAP4Q9C0A0 1308 aa6.97□□□□□ -1.29
SCARNA16.4-201ENST00000516956 TNS1Q9HBL0 1735 aaKnown RBP6.96□□□□□ -1.29
SCARNA16.4-201ENST00000516956 TCERG1O14776 1098 aaKnown RBP6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SLC4A2P04920 1241 aa6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 CENPBP07199 599 aaPredicted RBP6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SSFA2P28290 1259 aa6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 IL6STP40189 918 aaPredicted RBP6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 R3HDM1Q15032 1099 aaKnown RBP6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 KRT24Q2M2I5 525 aa6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PROM2Q8N271 834 aa6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SLC4A9Q96Q91 983 aa6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SPINK5Q9NQ38 1064 aaPredicted RBP6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 DDX21Q9NR30 783 aaKnown RBP eCLIP6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SMC4Q9NTJ3 1288 aa6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ZNF652Q9Y2D9 606 aa6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 VIRMAQ69YN4 1812 aaKnown RBP6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 KCPQ6ZWJ8 1503 aa6.96□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SIPA1L3O60292 1781 aaPredicted RBP6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PRAMEF22A3QJZ6 481 aa6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 IPO8O15397 1037 aaKnown RBP6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 VAMP4O75379 141 aa6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 NEXNQ0ZGT2 675 aa6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 RIC3Q7Z5B4 369 aa6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 DZIP3Q86Y13 1208 aaKnown RBP6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 TSPYL6Q8N831 410 aa6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 CHPF2Q9P2E5 772 aa6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ZBTB1Q9Y2K1 713 aa6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 RGPD3A6NKT7 1758 aaPredicted RBP6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 KDM3BQ7LBC6 1761 aa6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 RGPD4Q7Z3J3 1758 aa6.95□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PAPPAQ13219 1627 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PSDA5PKW4 1024 aaPredicted RBP6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 MS4A1P11836 297 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 POLD1P28340 1107 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 GTF2E1P29083 439 aaPredicted RBP6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PIP4K2AP48426 406 aaPredicted RBP6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 FKBP5Q13451 457 aaPredicted RBP6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ZNF827Q17R98 1081 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ALDH1L2Q3SY69 923 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 HSP90AB3PQ58FF7 597 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 INTS5Q6P9B9 1019 aaKnown RBP6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 COPS6Q7L5N1 327 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 TRMT2AQ8IZ69 625 aaKnown RBP6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SLC16A10Q8TF71 515 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 XAGE3Q8WTP9 111 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 FRAT1Q92837 279 aaPredicted RBP6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 AKT1S1Q96B36 256 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 TBC1D2BQ9UPU7 963 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 COL15A1P39059 1388 aa6.94□□□□□ -1.3
SCARNA16.4-201ENST00000516956 LY75O60449 1722 aa6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ANXA1P04083 346 aa6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 EIF5P55010 431 aaKnown RBP6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ANKRD13DQ6ZTN6 518 aa6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 NLGN1Q8N2Q7 840 aa6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ARHGEF1Q92888 912 aaKnown RBP6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 API5Q9BZZ5 524 aaKnown RBP6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ZBTB3Q9H5J0 574 aa6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 NARFQ9UHQ1 456 aa6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 RCAN3Q9UKA8 241 aa6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 KIF16BQ96L93 1317 aa6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 C5P01031 1676 aa6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 C4BP0C0L5 1744 aa6.93□□□□□ -1.3
SCARNA16.4-201ENST00000516956 UBR2Q8IWV8 1755 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 NBPF26B4DH59 902 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ERVV-1B6SEH8 477 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 RARSP54136 660 aaKnown RBP6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 FLIIQ13045 1269 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 USPL1Q5W0Q7 1092 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 NBPF10Q6P3W6 841 aaKnown RBP6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 BICDL1Q6ZP65 573 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 COL23A1Q86Y22 540 aaPredicted RBP6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 FTSJ3Q8IY81 847 aaKnown RBP6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 NBPF15Q8N660 670 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PLBD2Q8NHP8 589 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SSH1Q8WYL5 1049 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 SETDB2Q96T68 719 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 BCL2L13Q9BXK5 485 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ANO8Q9HCE9 1232 aaPredicted RBP6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PPP1R1BQ9UD71 204 aaPredicted RBP6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 PARP3Q9Y6F1 533 aa6.92□□□□□ -1.3
SCARNA16.4-201ENST00000516956 ZNF831Q5JPB2 1677 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms