RNA–Protein interactions for RNA: ENST00000516173.1

RN7SKP43-201, Transcript of RNA, 7SK small nuclear pseudogene 43, humanhuman

BASIC

Gene RN7SKP43, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP43-201ENST00000516173 DEPDC5O75140 1603 aa4.05□□□□□ -1.76
RN7SKP43-201ENST00000516173 ARHGAP5Q13017 1502 aa4.05□□□□□ -1.76
RN7SKP43-201ENST00000516173 SPHKAPQ2M3C7 1700 aa4.04□□□□□ -1.76
RN7SKP43-201ENST00000516173 PARD3Q8TEW0 1356 aa4.04□□□□□ -1.76
RN7SKP43-201ENST00000516173 TET3O43151 1660 aa4.04□□□□□ -1.76
RN7SKP43-201ENST00000516173 MS4A1P11836 297 aa4.04□□□□□ -1.76
RN7SKP43-201ENST00000516173 TXKP42681 527 aa4.04□□□□□ -1.76
RN7SKP43-201ENST00000516173 CCDC184Q52MB2 194 aa4.04□□□□□ -1.76
RN7SKP43-201ENST00000516173 AMER1Q5JTC6 1135 aaPredicted RBP4.04□□□□□ -1.76
RN7SKP43-201ENST00000516173 HLA-CQ95604 372 aa4.04□□□□□ -1.76
RN7SKP43-201ENST00000516173 WDR70Q9NW82 654 aa4.04□□□□□ -1.76
RN7SKP43-201ENST00000516173 SCAPERQ9BY12 1400 aa4.04□□□□□ -1.76
RN7SKP43-201ENST00000516173 IQGAP1P46940 1657 aa4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 ZCCHC11Q5TAX3 1644 aaKnown RBP4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 RNF17Q9BXT8 1623 aaKnown RBP4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 ARID3CA6NKF2 412 aa4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 TCERG1O14776 1098 aaKnown RBP4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 SPINT1O43278 529 aa4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 OIP5O43482 229 aa4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 KDM4AO75164 1064 aa4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 CHRNA4P43681 627 aa4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 RETREG3Q86VR2 466 aa4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 BCANQ96GW7 911 aa4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 CCDC136Q96JN2 1154 aa4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 PUS7Q96PZ0 661 aaKnown RBP4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 PTPRTO14522 1441 aa4.03□□□□□ -1.76
RN7SKP43-201ENST00000516173 KANK1Q14678 1352 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 TTC37Q6PGP7 1564 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 ARID1BQ8NFD5 2236 aaPredicted RBP4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 TRPM2O94759 1503 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 ABCC1P33527 1531 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 SYCP2Q9BX26 1530 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 SENP3-EIF4A1A0A087X0R7 540 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 PAX4O43316 350 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 GRM5P41594 1212 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 USP46P62068 366 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 AAMPQ13685 434 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 PTPRNQ16849 979 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 MCTP1Q6DN14 999 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 TESK2Q96S53 571 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 KDM2AQ9Y2K7 1162 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 PLA2R1Q13018 1463 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 COL17A1Q9UMD9 1497 aaPredicted RBP4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 ABCA9Q8IUA7 1624 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 VWDEQ8N2E2 1590 aa4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 EIF3AQ14152 1382 aaKnown RBP4.02□□□□□ -1.77
RN7SKP43-201ENST00000516173 CLASP1Q7Z460 1538 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 KDM5AP29375 1690 aaKnown RBP4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 A2MP01023 1474 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 KCNH2Q12809 1159 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 FZD5Q13467 585 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 HIC1Q14526 733 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 ZNF326Q5BKZ1 582 aaKnown RBP4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 ERICH6Q7L0X2 663 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 SYMPKQ92797 1274 aaKnown RBP4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 EVA1BQ9NVM1 165 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 CUEDC1Q9NWM3 386 aaPredicted RBP4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 RCAN3Q9UKA8 241 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 SYNMO15061 1565 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 CFAP74Q9C0B2 1584 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 IFT172Q9UG01 1749 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 SBNO2Q9Y2G9 1366 aa4.01□□□□□ -1.77
RN7SKP43-201ENST00000516173 SPAG9O60271 1321 aaKnown RBP4□□□□□ -1.77
RN7SKP43-201ENST00000516173 RPGRIP1LQ68CZ1 1315 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 SCAF11Q99590 1463 aaKnown RBP4□□□□□ -1.77
RN7SKP43-201ENST00000516173 MADDQ8WXG6 1647 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 HOXA2O43364 376 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 CD46P15529 392 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 ANP32AP39687 249 aaKnown RBP4□□□□□ -1.77
RN7SKP43-201ENST00000516173 LRP8Q14114 963 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 RSPO4Q2I0M5 234 aaPredicted RBP4□□□□□ -1.77
RN7SKP43-201ENST00000516173 FOXR1Q6PIV2 292 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 KRTAP4-5Q9BYR2 181 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 RRAGCQ9HB90 399 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 USP35Q9P2H5 1018 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 KNSTRNQ9Y448 316 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 EMILIN1Q9Y6C2 1016 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 PIK3C2GO75747 1445 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 BLMP54132 1417 aaPredicted RBP4□□□□□ -1.77
RN7SKP43-201ENST00000516173 SETBP1Q9Y6X0 1596 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 LMTK2Q8IWU2 1503 aa4□□□□□ -1.77
RN7SKP43-201ENST00000516173 MYO3AQ8NEV4 1616 aa3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 MYOM2P54296 1465 aa3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 INO80Q9ULG1 1556 aaPredicted RBP3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 GPR25O00155 361 aa3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 FSHRP23945 695 aa3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 RRP1P56182 461 aaKnown RBP3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 GUCA2AQ02747 115 aa3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 B4GALNT3Q6L9W6 998 aa3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 IPO9Q96P70 1041 aaKnown RBP3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 SUV39H2Q9H5I1 410 aa3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 PANK3Q9H999 370 aa3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 NSFL1CQ9UNZ2 370 aaKnown RBP3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 ATP7AQ04656 1500 aa3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 ASXL1Q8IXJ9 1541 aa3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 MAP3K4Q9Y6R4 1608 aa3.99□□□□□ -1.77
RN7SKP43-201ENST00000516173 FANCAO15360 1455 aa3.98□□□□□ -1.77
RN7SKP43-201ENST00000516173 SHISA8B8ZZ34 492 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms