RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 LMOD3Q0VAK6 560 aa14.76□□□□□ -0.05
SCARNA16.1-201ENST00000516133 RUNDC1Q96C34 613 aa14.76□□□□□ -0.05
SCARNA16.1-201ENST00000516133 ZBTB1Q9Y2K1 713 aa14.76□□□□□ -0.05
SCARNA16.1-201ENST00000516133 CANXP27824 592 aaKnown RBP14.75□□□□□ -0.05
SCARNA16.1-201ENST00000516133 SIPA1L3O60292 1781 aaPredicted RBP14.75□□□□□ -0.05
SCARNA16.1-201ENST00000516133 TJP1Q07157 1748 aa14.75□□□□□ -0.05
SCARNA16.1-201ENST00000516133 USP42Q9H9J4 1324 aaKnown RBP14.74□□□□□ -0.05
SCARNA16.1-201ENST00000516133 A0A087WZG4 1122 aa14.74□□□□□ -0.05
SCARNA16.1-201ENST00000516133 ANP32CO43423 234 aa14.74□□□□□ -0.05
SCARNA16.1-201ENST00000516133 EIF5P55010 431 aaKnown RBP14.74□□□□□ -0.05
SCARNA16.1-201ENST00000516133 NPM2Q86SE8 214 aaKnown RBP14.74□□□□□ -0.05
SCARNA16.1-201ENST00000516133 MIS18AQ9NYP9 233 aa14.74□□□□□ -0.05
SCARNA16.1-201ENST00000516133 NARFQ9UHQ1 456 aa14.74□□□□□ -0.05
SCARNA16.1-201ENST00000516133 UBR2Q8IWV8 1755 aa14.74□□□□□ -0.05
SCARNA16.1-201ENST00000516133 IL6STP40189 918 aaPredicted RBP14.73□□□□□ -0.05
SCARNA16.1-201ENST00000516133 CCDC146Q8IYE0 955 aa14.73□□□□□ -0.05
SCARNA16.1-201ENST00000516133 THUMPD2Q9BTF0 503 aaKnown RBP14.73□□□□□ -0.05
SCARNA16.1-201ENST00000516133 SRP68Q9UHB9 627 aaKnown RBP14.73□□□□□ -0.05
SCARNA16.1-201ENST00000516133 USP16Q9Y5T5 823 aa14.73□□□□□ -0.05
SCARNA16.1-201ENST00000516133 PARP3Q9Y6F1 533 aa14.73□□□□□ -0.05
SCARNA16.1-201ENST00000516133 FKBP8Q14318 412 aa14.72□□□□□ -0.05
SCARNA16.1-201ENST00000516133 GPR162Q16538 588 aa14.72□□□□□ -0.05
SCARNA16.1-201ENST00000516133 NLGN2Q8NFZ4 835 aa14.72□□□□□ -0.05
SCARNA16.1-201ENST00000516133 BABAM1Q9NWV8 329 aa14.72□□□□□ -0.05
SCARNA16.1-201ENST00000516133 UTRNP46939 3433 aa14.72□□□□□ -0.05
SCARNA16.1-201ENST00000516133 A1BGP04217 495 aa14.71□□□□□ -0.05
SCARNA16.1-201ENST00000516133 NEUROD2Q15784 382 aa14.71□□□□□ -0.05
SCARNA16.1-201ENST00000516133 USPL1Q5W0Q7 1092 aa14.71□□□□□ -0.05
SCARNA16.1-201ENST00000516133 COL15A1P39059 1388 aa14.71□□□□□ -0.06
SCARNA16.1-201ENST00000516133 TM4SF1P30408 202 aa14.7□□□□□ -0.06
SCARNA16.1-201ENST00000516133 RRP7AQ9Y3A4 280 aaKnown RBP14.7□□□□□ -0.06
SCARNA16.1-201ENST00000516133 GOLGB1Q14789 3259 aaKnown RBP14.69□□□□□ -0.06
SCARNA16.1-201ENST00000516133 DLG5Q8TDM6 1919 aa14.69□□□□□ -0.06
SCARNA16.1-201ENST00000516133 GIGYF1O75420 1035 aaPredicted RBP14.69□□□□□ -0.06
SCARNA16.1-201ENST00000516133 EIF4A1P60842 406 aaKnown RBP14.69□□□□□ -0.06
SCARNA16.1-201ENST00000516133 TGFB2P61812 414 aa14.69□□□□□ -0.06
SCARNA16.1-201ENST00000516133 TSPYL4Q9UJ04 414 aa14.69□□□□□ -0.06
SCARNA16.1-201ENST00000516133 ZNF330Q9Y3S2 320 aaPredicted RBP14.69□□□□□ -0.06
SCARNA16.1-201ENST00000516133 PRAMEF22A3QJZ6 481 aa14.68□□□□□ -0.06
SCARNA16.1-201ENST00000516133 GRIN3BO60391 1043 aa14.68□□□□□ -0.06
SCARNA16.1-201ENST00000516133 PELP1Q8IZL8 1130 aaKnown RBP14.68□□□□□ -0.06
SCARNA16.1-201ENST00000516133 NFIXQ14938 502 aa14.67□□□□□ -0.06
SCARNA16.1-201ENST00000516133 BCL2L12Q9HB09 334 aa14.67□□□□□ -0.06
SCARNA16.1-201ENST00000516133 TRIM35Q9UPQ4 493 aa14.67□□□□□ -0.06
SCARNA16.1-201ENST00000516133 TBC1D2BQ9UPU7 963 aa14.67□□□□□ -0.06
SCARNA16.1-201ENST00000516133 C4AP0C0L4 1744 aa14.66□□□□□ -0.06
SCARNA16.1-201ENST00000516133 POLRMTO00411 1230 aaKnown RBP14.66□□□□□ -0.06
SCARNA16.1-201ENST00000516133 CHL1O00533 1208 aa14.66□□□□□ -0.06
SCARNA16.1-201ENST00000516133 APAF1O14727 1248 aa14.66□□□□□ -0.06
SCARNA16.1-201ENST00000516133 DDR1Q08345 913 aa14.66□□□□□ -0.06
SCARNA16.1-201ENST00000516133 YY1P25490 414 aa14.65□□□□□ -0.06
SCARNA16.1-201ENST00000516133 CALD1Q05682 793 aaKnown RBP14.65□□□□□ -0.06
SCARNA16.1-201ENST00000516133 CCDC184Q52MB2 194 aa14.65□□□□□ -0.06
SCARNA16.1-201ENST00000516133 DZIP3Q86Y13 1208 aaKnown RBP14.65□□□□□ -0.06
SCARNA16.1-201ENST00000516133 MRS2Q9HD23 443 aa14.65□□□□□ -0.06
SCARNA16.1-201ENST00000516133 NBPF26B4DH59 902 aa14.64□□□□□ -0.07
SCARNA16.1-201ENST00000516133 RGL2O15211 777 aa14.64□□□□□ -0.07
SCARNA16.1-201ENST00000516133 NBPF10Q6P3W6 841 aaKnown RBP14.64□□□□□ -0.07
SCARNA16.1-201ENST00000516133 CLEC4GQ6UXB4 293 aa14.64□□□□□ -0.07
SCARNA16.1-201ENST00000516133 NBPF15Q8N660 670 aa14.64□□□□□ -0.07
SCARNA16.1-201ENST00000516133 A0A0G2JLW4 131 aa14.63□□□□□ -0.07
SCARNA16.1-201ENST00000516133 CAMTA2O94983 1202 aa14.63□□□□□ -0.07
SCARNA16.1-201ENST00000516133 SERPINB2P05120 415 aa14.63□□□□□ -0.07
SCARNA16.1-201ENST00000516133 YBX3P16989 372 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCARNA16.1-201ENST00000516133 PIP4K2AP48426 406 aaPredicted RBP14.63□□□□□ -0.07
SCARNA16.1-201ENST00000516133 SETDB2Q96T68 719 aa14.63□□□□□ -0.07
SCARNA16.1-201ENST00000516133 ZNF652Q9Y2D9 606 aa14.63□□□□□ -0.07
SCARNA16.1-201ENST00000516133 LAS1LQ9Y4W2 734 aaKnown RBP14.63□□□□□ -0.07
SCARNA16.1-201ENST00000516133 C10orf71Q711Q0 1435 aa14.63□□□□□ -0.07
SCARNA16.1-201ENST00000516133 TBC1D9BQ66K14 1250 aa14.62□□□□□ -0.07
SCARNA16.1-201ENST00000516133 BICDL1Q6ZP65 573 aa14.62□□□□□ -0.07
SCARNA16.1-201ENST00000516133 CFAP44Q96MT7 982 aa14.62□□□□□ -0.07
SCARNA16.1-201ENST00000516133 ERBB4Q15303 1308 aa14.62□□□□□ -0.07
SCARNA16.1-201ENST00000516133 KDM3BQ7LBC6 1761 aa14.61□□□□□ -0.07
SCARNA16.1-201ENST00000516133 DPEP1P16444 411 aa14.61□□□□□ -0.07
SCARNA16.1-201ENST00000516133 EIF2S2P20042 333 aaKnown RBP14.6□□□□□ -0.07
SCARNA16.1-201ENST00000516133 PIM2Q9P1W9 311 aa14.6□□□□□ -0.07
SCARNA16.1-201ENST00000516133 PXDNLA1KZ92 1463 aa14.59□□□□□ -0.07
SCARNA16.1-201ENST00000516133 ERVV-1B6SEH8 477 aa14.59□□□□□ -0.07
SCARNA16.1-201ENST00000516133 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
SCARNA16.1-201ENST00000516133 NGEFQ8N5V2 710 aa14.59□□□□□ -0.07
SCARNA16.1-201ENST00000516133 IFT57Q9NWB7 429 aa14.59□□□□□ -0.07
SCARNA16.1-201ENST00000516133 KIF13BQ9NQT8 1826 aa14.59□□□□□ -0.07
SCARNA16.1-201ENST00000516133 CARMIL3Q8ND23 1372 aa14.59□□□□□ -0.07
SCARNA16.1-201ENST00000516133 HOXB7P09629 217 aa14.58□□□□□ -0.08
SCARNA16.1-201ENST00000516133 ZNF853P0CG23 659 aa14.58□□□□□ -0.08
SCARNA16.1-201ENST00000516133 MYL6BP14649 208 aa14.58□□□□□ -0.08
SCARNA16.1-201ENST00000516133 KCNA3P22001 575 aa14.58□□□□□ -0.08
SCARNA16.1-201ENST00000516133 GNAI1P63096 354 aa14.58□□□□□ -0.08
SCARNA16.1-201ENST00000516133 CCDC27Q2M243 656 aa14.58□□□□□ -0.08
SCARNA16.1-201ENST00000516133 BRIP1Q9BX63 1249 aa14.58□□□□□ -0.08
SCARNA16.1-201ENST00000516133 WWC3Q9ULE0 1092 aa14.58□□□□□ -0.08
SCARNA16.1-201ENST00000516133 PDZRN3Q9UPQ7 1066 aa14.58□□□□□ -0.08
SCARNA16.1-201ENST00000516133 BCS1LQ9Y276 419 aa14.58□□□□□ -0.08
SCARNA16.1-201ENST00000516133 NPHP1O15259 732 aa14.57□□□□□ -0.08
SCARNA16.1-201ENST00000516133 DALRD3Q5D0E6 543 aaKnown RBP14.57□□□□□ -0.08
SCARNA16.1-201ENST00000516133 KIF6Q6ZMV9 814 aa14.57□□□□□ -0.08
SCARNA16.1-201ENST00000516133 H0YIN7 160 aa14.56□□□□□ -0.08
SCARNA16.1-201ENST00000516133 PDE6BP35913 854 aa14.56□□□□□ -0.08
SCARNA16.1-201ENST00000516133 PDIA6Q15084 440 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms