RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	LCE2B	O14633	110 aa		5.73	□□□□□ -1.49
ATP2C1-223	ENST00000515854	TAF7	Q15545	349 aa	Predicted RBP	5.73	□□□□□ -1.49
ATP2C1-223	ENST00000515854	AKAP4	Q5JQC9	854 aa		5.73	□□□□□ -1.49
ATP2C1-223	ENST00000515854	IFNL1	Q8IU54	200 aa		5.73	□□□□□ -1.49
ATP2C1-223	ENST00000515854	FTSJ3	Q8IY81	847 aa	Known RBP	5.73	□□□□□ -1.49
ATP2C1-223	ENST00000515854	CABLES1	Q8TDN4	633 aa		5.73	□□□□□ -1.49
ATP2C1-223	ENST00000515854	ZNF775	Q96BV0	537 aa	Predicted RBP	5.73	□□□□□ -1.49
ATP2C1-223	ENST00000515854	TSPYL4	Q9UJ04	414 aa		5.73	□□□□□ -1.49
ATP2C1-223	ENST00000515854	SOS1	Q07889	1333 aa	Predicted RBP	5.73	□□□□□ -1.49
ATP2C1-223	ENST00000515854	TCERG1	O14776	1098 aa	Known RBP	5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	IGHD	P01880	384 aa		5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	KRT24	Q2M2I5	525 aa		5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	ZNF530	Q6P9A1	599 aa	Predicted RBP	5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	TMEM57	Q8N5G2	664 aa		5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	API5	Q9BZZ5	524 aa	Known RBP	5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	LGR6	Q9HBX8	967 aa		5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	5.72	□□□□□ -1.49	2e-6	■□□□□ 11.1
ATP2C1-223	ENST00000515854	MIS18A	Q9NYP9	233 aa		5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	DDX19B	Q9UMR2	479 aa		5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	NHSL1	Q5SYE7	1610 aa		5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	LTBP4	Q8N2S1	1624 aa		5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	OVOS2	A0A0G2JMS6	1433 aa		5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	ABCC4	O15439	1325 aa		5.72	□□□□□ -1.49
ATP2C1-223	ENST00000515854	RGPD2	P0DJD1	1756 aa		5.71	□□□□□ -1.5
ATP2C1-223	ENST00000515854	RIOK3	O14730	519 aa	Known RBP	5.71	□□□□□ -1.5
ATP2C1-223	ENST00000515854	RIMBP2	O15034	1052 aa		5.71	□□□□□ -1.5
ATP2C1-223	ENST00000515854	RNMT	O43148	476 aa	Known RBP	5.71	□□□□□ -1.5
ATP2C1-223	ENST00000515854	CHRNA2	Q15822	529 aa		5.71	□□□□□ -1.5
ATP2C1-223	ENST00000515854	ZBTB40	Q9NUA8	1239 aa		5.71	□□□□□ -1.5
ATP2C1-223	ENST00000515854	NLRP2	Q9NX02	1062 aa		5.71	□□□□□ -1.5
ATP2C1-223	ENST00000515854	PCDHB15	Q9Y5E8	787 aa		5.71	□□□□□ -1.5
ATP2C1-223	ENST00000515854	FAM208A	Q9UK61	1670 aa	Known RBP	5.71	□□□□□ -1.5
ATP2C1-223	ENST00000515854	ADAMTS7	Q9UKP4	1686 aa		5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854		A0A0G2JS52	829 aa		5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	ZBTB7B	O15156	539 aa	Predicted RBP	5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	CSB-PGBD3	P0DP91	1061 aa		5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	TAT	P17735	454 aa	Predicted RBP	5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	C1orf141	Q5JVX7	400 aa		5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	ITPRIP	Q8IWB1	547 aa		5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	PDCD7	Q8N8D1	485 aa	Known RBP	5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	RAPGEF4	Q8WZA2	1011 aa		5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	FAM212A	Q96EL1	285 aa		5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	CHMP4B	Q9H444	224 aa	Known RBP	5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	RWDD1	Q9H446	243 aa	Predicted RBP	5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	RBM19	Q9Y4C8	960 aa	Known RBP	5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	PTPRC	P08575	1304 aa		5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	WDR17	Q8IZU2	1322 aa		5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	AHDC1	Q5TGY3	1603 aa	Predicted RBP	5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	RGPD5	Q99666	1765 aa		5.7	□□□□□ -1.5
ATP2C1-223	ENST00000515854	RGS12	O14924	1447 aa		5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	HOXB7	P09629	217 aa		5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	PHKG2	P15735	406 aa		5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	EIF4A1	P60842	406 aa	Known RBP	5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	TEF	Q10587	303 aa		5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	HDAC1	Q13547	482 aa	Predicted RBP	5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	CCDC30	Q5VVM6	783 aa		5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	INTS3	Q68E01	1043 aa	Known RBP	5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	MPRIP	Q6WCQ1	1025 aa		5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	RASEF	Q8IZ41	740 aa		5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	CHMP4A	Q9BY43	222 aa		5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	PRDM11	Q9NQV5	511 aa		5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	SPG7	Q9UQ90	795 aa		5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	MEGF6	O75095	1541 aa		5.69	□□□□□ -1.5
ATP2C1-223	ENST00000515854	HEG1	Q9ULI3	1381 aa		5.68	□□□□□ -1.5
ATP2C1-223	ENST00000515854	ABCA3	Q99758	1704 aa		5.68	□□□□□ -1.5
ATP2C1-223	ENST00000515854	BTBD11	A6QL63	1104 aa		5.68	□□□□□ -1.5
ATP2C1-223	ENST00000515854	DCAF8	Q5TAQ9	597 aa		5.68	□□□□□ -1.5
ATP2C1-223	ENST00000515854	ZNF787	Q6DD87	383 aa		5.68	□□□□□ -1.5
ATP2C1-223	ENST00000515854	G2E3	Q7L622	706 aa		5.68	□□□□□ -1.5
ATP2C1-223	ENST00000515854	IFNL2	Q8IZJ0	200 aa		5.68	□□□□□ -1.5
ATP2C1-223	ENST00000515854	CARD10	Q9BWT7	1032 aa		5.68	□□□□□ -1.5
ATP2C1-223	ENST00000515854	COL5A2	P05997	1499 aa	Predicted RBP	5.68	□□□□□ -1.5
ATP2C1-223	ENST00000515854	KDM3B	Q7LBC6	1761 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	COL22A1	Q8NFW1	1626 aa	Predicted RBP	5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	KDM6A	O15550	1401 aa	Predicted RBP	5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	ROBO1	Q9Y6N7	1651 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	CYP27B1	O15528	508 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	KCNQ3	O43525	872 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	HSP90AB1	P08238	724 aa	Known RBP	5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	PDE4A	P27815	886 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	TOM1L2	Q6ZVM7	507 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	SKAP1	Q86WV1	359 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	SMC5	Q8IY18	1101 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	DCAF5	Q96JK2	942 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	STK31	Q9BXU1	1019 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	SLC52A2	Q9HAB3	445 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	PKD1L3	Q7Z443	1732 aa		5.67	□□□□□ -1.5
ATP2C1-223	ENST00000515854	MRC1	P22897	1456 aa		5.66	□□□□□ -1.5
ATP2C1-223	ENST00000515854	GIGYF1	O75420	1035 aa	Predicted RBP	5.66	□□□□□ -1.5
ATP2C1-223	ENST00000515854	CCT4	P50991	539 aa	Known RBP	5.66	□□□□□ -1.5
ATP2C1-223	ENST00000515854	FLII	Q13045	1269 aa		5.66	□□□□□ -1.5
ATP2C1-223	ENST00000515854	NKX1-1	Q15270	411 aa	Predicted RBP	5.66	□□□□□ -1.5
ATP2C1-223	ENST00000515854	IFFO2	Q5TF58	517 aa		5.66	□□□□□ -1.5
ATP2C1-223	ENST00000515854	HDGFL1	Q5TGJ6	251 aa		5.66	□□□□□ -1.5
ATP2C1-223	ENST00000515854	LARP1	Q6PKG0	1096 aa	Known RBP	5.66	□□□□□ -1.5
ATP2C1-223	ENST00000515854	ZCRB1	Q8TBF4	217 aa	Known RBP	5.66	□□□□□ -1.5
ATP2C1-223	ENST00000515854	BACH2	Q9BYV9	841 aa		5.66	□□□□□ -1.5
ATP2C1-223	ENST00000515854	PDZRN3	Q9UPQ7	1066 aa		5.66	□□□□□ -1.5
ATP2C1-223	ENST00000515854	SIPA1L3	O60292	1781 aa	Predicted RBP	5.65	□□□□□ -1.5
ATP2C1-223	ENST00000515854	GTPBP6	O43824	516 aa	Predicted RBP	5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms