RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 TNS2Q63HR2 1409 aa25.24■■□□□ 1.63
TRIO-223ENST00000515710 N4BP2Q86UW6 1770 aaPredicted RBP25.24■■□□□ 1.63
TRIO-223ENST00000515710 C5P01031 1676 aa25.24■■□□□ 1.63
TRIO-223ENST00000515710 PI4KAP2A4QPH2 592 aa25.24■■□□□ 1.63
TRIO-223ENST00000515710 PROSER3Q2NL68 480 aa25.24■■□□□ 1.63
TRIO-223ENST00000515710 BARGINQ6ZT62 677 aa25.24■■□□□ 1.63
TRIO-223ENST00000515710 UNC5CLQ8IV45 518 aa25.24■■□□□ 1.63
TRIO-223ENST00000515710 PI4KAP1Q8N8J0 262 aa25.24■■□□□ 1.63
TRIO-223ENST00000515710 SRCIN1Q9C0H9 1055 aa25.24■■□□□ 1.63
TRIO-223ENST00000515710 USP16Q9Y5T5 823 aa25.24■■□□□ 1.63
TRIO-223ENST00000515710 DDX58O95786 925 aaKnown RBP25.23■■□□□ 1.63
TRIO-223ENST00000515710 PAPPAQ13219 1627 aa25.23■■□□□ 1.63
TRIO-223ENST00000515710 KSR2Q6VAB6 950 aa25.22■■□□□ 1.63
TRIO-223ENST00000515710 LRP6O75581 1613 aa25.22■■□□□ 1.63
TRIO-223ENST00000515710 ATP10DQ9P241 1426 aa25.22■■□□□ 1.63
TRIO-223ENST00000515710 GNAI2P04899 355 aa25.22■■□□□ 1.63
TRIO-223ENST00000515710 PDE4AP27815 886 aa25.21■■□□□ 1.63
TRIO-223ENST00000515710 CEP85Q6P2H3 762 aa25.21■■□□□ 1.63
TRIO-223ENST00000515710 NGLY1Q96IV0 654 aa25.21■■□□□ 1.63
TRIO-223ENST00000515710 TOGARAM1Q9Y4F4 1720 aa25.21■■□□□ 1.63
TRIO-223ENST00000515710 ERBB4Q15303 1308 aa25.21■■□□□ 1.63
TRIO-223ENST00000515710 ADCY9O60503 1353 aa25.21■■□□□ 1.63
TRIO-223ENST00000515710 DDB1Q16531 1140 aa25.2■■□□□ 1.62
TRIO-223ENST00000515710 BEND3Q5T5X7 828 aa25.2■■□□□ 1.62
TRIO-223ENST00000515710 CCDC9Q9Y3X0 531 aaKnown RBP25.2■■□□□ 1.62
TRIO-223ENST00000515710 UBR2Q8IWV8 1755 aa25.2■■□□□ 1.62
TRIO-223ENST00000515710 NUCB1Q02818 461 aa25.2■■□□□ 1.62
TRIO-223ENST00000515710 KCPQ6ZWJ8 1503 aa25.19■■□□□ 1.62
TRIO-223ENST00000515710 BACH2Q9BYV9 841 aa25.19■■□□□ 1.62
TRIO-223ENST00000515710 GLI3P10071 1580 aa25.18■■□□□ 1.62
TRIO-223ENST00000515710 FNBP4Q8N3X1 1017 aaPredicted RBP25.18■■□□□ 1.62
TRIO-223ENST00000515710 C8orf37Q96NL8 207 aa25.18■■□□□ 1.62
TRIO-223ENST00000515710 VPS72Q15906 364 aa25.18■■□□□ 1.62
TRIO-223ENST00000515710 PIGBQ92521 554 aa25.18■■□□□ 1.62
TRIO-223ENST00000515710 USP44Q9H0E7 712 aa25.18■■□□□ 1.62
TRIO-223ENST00000515710 MAP3K2Q9Y2U5 619 aa25.18■■□□□ 1.62
TRIO-223ENST00000515710 DCTPP1Q9H773 170 aa25.17■■□□□ 1.62
TRIO-223ENST00000515710 LAMB4A4D0S4 1761 aa25.17■■□□□ 1.62
TRIO-223ENST00000515710 HMMRO75330 724 aa25.16■■□□□ 1.62
TRIO-223ENST00000515710 ALDH1L1O75891 902 aa25.16■■□□□ 1.62
TRIO-223ENST00000515710 MYL6BP14649 208 aa25.16■■□□□ 1.62
TRIO-223ENST00000515710 BCL9LQ86UU0 1499 aa25.15■■□□□ 1.62
TRIO-223ENST00000515710 UBTFL1P0CB47 393 aaPredicted RBP25.15■■□□□ 1.62
TRIO-223ENST00000515710 FAM161AQ3B820 660 aa25.15■■□□□ 1.62
TRIO-223ENST00000515710 LRP10Q7Z4F1 713 aa25.15■■□□□ 1.62
TRIO-223ENST00000515710 CHD1LQ86WJ1 897 aa25.15■■□□□ 1.62
TRIO-223ENST00000515710 VSIG10Q8N0Z9 540 aa25.15■■□□□ 1.62
TRIO-223ENST00000515710 BCL11AQ9H165 835 aa25.15■■□□□ 1.62
TRIO-223ENST00000515710 PTCD1O75127 700 aaKnown RBP25.14■■□□□ 1.62
TRIO-223ENST00000515710 AIMP1Q12904 312 aaKnown RBP25.14■■□□□ 1.62
TRIO-223ENST00000515710 TEX13AQ9BXU3 409 aaPredicted RBP25.14■■□□□ 1.62
TRIO-223ENST00000515710 BCL9O00512 1426 aa25.14■■□□□ 1.61
TRIO-223ENST00000515710 COPS6Q7L5N1 327 aa25.14■■□□□ 1.61
TRIO-223ENST00000515710 XAGE3Q8WTP9 111 aa25.14■■□□□ 1.61
TRIO-223ENST00000515710 ANKRD45Q5TZF3 282 aa25.13■■□□□ 1.61
TRIO-223ENST00000515710 RIC3Q7Z5B4 369 aa25.13■■□□□ 1.61
TRIO-223ENST00000515710 ATG3Q9NT62 314 aa25.13■■□□□ 1.61
TRIO-223ENST00000515710 LINS1Q8NG48 757 aa25.12■■□□□ 1.61
TRIO-223ENST00000515710 IBTKQ9P2D0 1353 aaPredicted RBP25.12■■□□□ 1.61
TRIO-223ENST00000515710 HSPA1LP34931 641 aa25.12■■□□□ 1.61
TRIO-223ENST00000515710 ATP8B2P98198 1209 aa25.12■■□□□ 1.61
TRIO-223ENST00000515710 ASAP1Q9ULH1 1129 aa25.12■■□□□ 1.61
TRIO-223ENST00000515710 ITGB4P16144 1822 aa25.11■■□□□ 1.61
TRIO-223ENST00000515710 HDAC5Q9UQL6 1122 aa25.11■■□□□ 1.61
TRIO-223ENST00000515710 ANKRD13DQ6ZTN6 518 aa25.1■■□□□ 1.61
TRIO-223ENST00000515710 LRRFIP2Q9Y608 721 aaKnown RBP25.1■■□□□ 1.61
TRIO-223ENST00000515710 NEXNQ0ZGT2 675 aa25.09■■□□□ 1.61
TRIO-223ENST00000515710 LNPKQ9C0E8 428 aa25.09■■□□□ 1.61
TRIO-223ENST00000515710 USP21Q9UK80 565 aa25.09■■□□□ 1.61
TRIO-223ENST00000515710 MARCH10Q8NA82 808 aaPredicted RBP25.08■■□□□ 1.61
TRIO-223ENST00000515710 METTL22Q9BUU2 404 aaPredicted RBP25.08■■□□□ 1.61
TRIO-223ENST00000515710 PRIM1P49642 420 aaKnown RBP25.08■■□□□ 1.6
TRIO-223ENST00000515710 NBPF26B4DH59 902 aa25.07■■□□□ 1.6
TRIO-223ENST00000515710 C8orf34Q49A92 452 aa25.07■■□□□ 1.6
TRIO-223ENST00000515710 NBPF14Q5TI25 921 aa25.07■■□□□ 1.6
TRIO-223ENST00000515710 NBPF10Q6P3W6 841 aaKnown RBP25.07■■□□□ 1.6
TRIO-223ENST00000515710 NBPF15Q8N660 670 aa25.07■■□□□ 1.6
TRIO-223ENST00000515710 SYTL4Q96C24 671 aaPredicted RBP25.06■■□□□ 1.6
TRIO-223ENST00000515710 ZBTB47Q9UFB7 747 aaPredicted RBP25.06■■□□□ 1.6
TRIO-223ENST00000515710 A1BGP04217 495 aa25.06■■□□□ 1.6
TRIO-223ENST00000515710 PIP4K2AP48426 406 aaPredicted RBP25.06■■□□□ 1.6
TRIO-223ENST00000515710 FAM98CQ17RN3 349 aaKnown RBP25.06■■□□□ 1.6
TRIO-223ENST00000515710 MEX3CQ5U5Q3 659 aaKnown RBP25.06■■□□□ 1.6
TRIO-223ENST00000515710 PLBD2Q8NHP8 589 aa25.06■■□□□ 1.6
TRIO-223ENST00000515710 C9orf78Q9NZ63 289 aaPredicted RBP25.06■■□□□ 1.6
TRIO-223ENST00000515710 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.06■■□□□ 1.6
TRIO-223ENST00000515710 NBPF7P0C2Y1 421 aaPredicted RBP25.05■■□□□ 1.6
TRIO-223ENST00000515710 RBM42Q9BTD8 480 aaKnown RBP25.05■■□□□ 1.6
TRIO-223ENST00000515710 STARD3NLO95772 234 aa25.04■■□□□ 1.6
TRIO-223ENST00000515710 UTYO14607 1347 aa25.04■■□□□ 1.6
TRIO-223ENST00000515710 CWF19L2Q2TBE0 894 aaKnown RBP25.04■■□□□ 1.6
TRIO-223ENST00000515710 DOT1LQ8TEK3 1739 aa25.03■■□□□ 1.6
TRIO-223ENST00000515710 IGKV5-2P06315 115 aa25.02■■□□□ 1.6
TRIO-223ENST00000515710 DNAJC10Q8IXB1 793 aa25.02■■□□□ 1.6
TRIO-223ENST00000515710 MYD88Q99836 296 aa25.02■■□□□ 1.6
TRIO-223ENST00000515710 PNMA6EA0A0J9YXQ4 647 aa25.02■■□□□ 1.6
TRIO-223ENST00000515710 GRM8O00222 908 aa25.02■■□□□ 1.6
TRIO-223ENST00000515710 SSH3Q8TE77 659 aa25.02■■□□□ 1.6
TRIO-223ENST00000515710 NEURL1BA8MQ27 555 aa25.01■■□□□ 1.59
TRIO-223ENST00000515710 POLA2Q14181 598 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms