RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 L3MBTL3Q96JM7 780 aaPredicted RBP19.1■□□□□ 0.65
SMAD1-216ENST00000515527 SMG6Q86US8 1419 aaKnown RBP19.09■□□□□ 0.65
SMAD1-216ENST00000515527 DDX21Q9NR30 783 aaKnown RBP eCLIP19.09■□□□□ 0.65
SMAD1-216ENST00000515527 CNTNAP4Q9C0A0 1308 aa19.08■□□□□ 0.65
SMAD1-216ENST00000515527 RBM42Q9BTD8 480 aaKnown RBP19.08■□□□□ 0.64
SMAD1-216ENST00000515527 HACL1Q9UJ83 578 aa19.08■□□□□ 0.64
SMAD1-216ENST00000515527 FER1L6Q2WGJ9 1857 aa19.07■□□□□ 0.64
SMAD1-216ENST00000515527 ADAMTSL1Q8N6G6 1762 aa19.07■□□□□ 0.64
SMAD1-216ENST00000515527 C2CD5Q86YS7 1000 aa19.07■□□□□ 0.64
SMAD1-216ENST00000515527 ATG3Q9NT62 314 aa19.07■□□□□ 0.64
SMAD1-216ENST00000515527 USP42Q9H9J4 1324 aaKnown RBP19.06■□□□□ 0.64
SMAD1-216ENST00000515527 COL5A3P25940 1745 aaPredicted RBP19.06■□□□□ 0.64
SMAD1-216ENST00000515527 C21orf2O43822 256 aa19.06■□□□□ 0.64
SMAD1-216ENST00000515527 EPHX2P34913 555 aa19.06■□□□□ 0.64
SMAD1-216ENST00000515527 MYH14Q7Z406 1995 aaKnown RBP19.06■□□□□ 0.64
SMAD1-216ENST00000515527 H0YIN7 160 aa19.05■□□□□ 0.64
SMAD1-216ENST00000515527 FXR1P51114 621 aaKnown RBP eCLIP19.05■□□□□ 0.64
SMAD1-216ENST00000515527 PNMA8AQ86V59 439 aaPredicted RBP19.05■□□□□ 0.64
SMAD1-216ENST00000515527 TAOK3Q9H2K8 898 aa19.05■□□□□ 0.64
SMAD1-216ENST00000515527 KDRP35968 1356 aa19.05■□□□□ 0.64
SMAD1-216ENST00000515527 AFDNP55196 1824 aaKnown RBP19.04■□□□□ 0.64
SMAD1-216ENST00000515527 FBLN1P23142 703 aa19.04■□□□□ 0.64
SMAD1-216ENST00000515527 TM4SF1P30408 202 aa19.04■□□□□ 0.64
SMAD1-216ENST00000515527 NKX1-1Q15270 411 aaPredicted RBP19.04■□□□□ 0.64
SMAD1-216ENST00000515527 HDGFL2Q7Z4V5 671 aaPredicted RBP19.04■□□□□ 0.64
SMAD1-216ENST00000515527 SLC4A9Q96Q91 983 aa19.04■□□□□ 0.64
SMAD1-216ENST00000515527 BRPF1P55201 1214 aaPredicted RBP19.03■□□□□ 0.64
SMAD1-216ENST00000515527 EDC4Q6P2E9 1401 aaKnown RBP19.02■□□□□ 0.64
SMAD1-216ENST00000515527 TRPM7Q96QT4 1865 aa19.01■□□□□ 0.63
SMAD1-216ENST00000515527 FMR1Q06787 632 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMAD1-216ENST00000515527 ZNF622Q969S3 477 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMAD1-216ENST00000515527 ZNF831Q5JPB2 1677 aa19.01■□□□□ 0.63
SMAD1-216ENST00000515527 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
SMAD1-216ENST00000515527 SLC17A8Q8NDX2 589 aa19■□□□□ 0.63
SMAD1-216ENST00000515527 TMC1Q8TDI8 760 aa19■□□□□ 0.63
SMAD1-216ENST00000515527 TLL2Q9Y6L7 1015 aa19■□□□□ 0.63
SMAD1-216ENST00000515527 CIAPIN1Q6FI81 312 aa18.99■□□□□ 0.63
SMAD1-216ENST00000515527 RTL1A6NKG5 1358 aa18.98■□□□□ 0.63
SMAD1-216ENST00000515527 COG3Q96JB2 828 aa18.98■□□□□ 0.63
SMAD1-216ENST00000515527 SPG7Q9UQ90 795 aa18.98■□□□□ 0.63
SMAD1-216ENST00000515527 RNF123Q5XPI4 1314 aa18.98■□□□□ 0.63
SMAD1-216ENST00000515527 ZPR1O75312 459 aa18.97■□□□□ 0.63
SMAD1-216ENST00000515527 CRKLP46109 303 aaKnown RBP18.96■□□□□ 0.63
SMAD1-216ENST00000515527 USPL1Q5W0Q7 1092 aa18.96■□□□□ 0.63
SMAD1-216ENST00000515527 CST9Q5W186 159 aa18.96■□□□□ 0.63
SMAD1-216ENST00000515527 ZNF541Q9H0D2 1346 aa18.96■□□□□ 0.63
SMAD1-216ENST00000515527 CUL9Q8IWT3 2517 aa18.96■□□□□ 0.63
SMAD1-216ENST00000515527 A0A0C4DFX4 3053 aa18.95■□□□□ 0.62
SMAD1-216ENST00000515527 NRXN2Q9P2S2 1712 aa18.95■□□□□ 0.62
SMAD1-216ENST00000515527 SERPINB2P05120 415 aa18.95■□□□□ 0.62
SMAD1-216ENST00000515527 RRS1Q15050 365 aaKnown RBP18.95■□□□□ 0.62
SMAD1-216ENST00000515527 NFIXQ14938 502 aa18.94■□□□□ 0.62
SMAD1-216ENST00000515527 ADAMTS7Q9UKP4 1686 aa18.93■□□□□ 0.62
SMAD1-216ENST00000515527 CARMIL3Q8ND23 1372 aa18.93■□□□□ 0.62
SMAD1-216ENST00000515527 TRAF5O00463 557 aa18.92■□□□□ 0.62
SMAD1-216ENST00000515527 TERF2IPQ9NYB0 399 aa18.92■□□□□ 0.62
SMAD1-216ENST00000515527 CACNA1SQ13698 1873 aa18.91■□□□□ 0.62
SMAD1-216ENST00000515527 BICDL1Q6ZP65 573 aa18.91■□□□□ 0.62
SMAD1-216ENST00000515527 SAPCD2Q86UD0 394 aa18.91■□□□□ 0.62
SMAD1-216ENST00000515527 SLC12A5Q9H2X9 1139 aa18.91■□□□□ 0.62
SMAD1-216ENST00000515527 HPS5Q9UPZ3 1129 aa18.91■□□□□ 0.62
SMAD1-216ENST00000515527 CTU1Q7Z7A3 348 aaKnown RBP18.9■□□□□ 0.62
SMAD1-216ENST00000515527 IFNL2Q8IZJ0 200 aa18.89■□□□□ 0.61
SMAD1-216ENST00000515527 A0A1W2PP64 1363 aa18.89■□□□□ 0.61
SMAD1-216ENST00000515527 PHKG2P15735 406 aa18.88■□□□□ 0.61
SMAD1-216ENST00000515527 HSP90AB2PQ58FF8 381 aa18.88■□□□□ 0.61
SMAD1-216ENST00000515527 SOGA3Q5TF21 947 aa18.88■□□□□ 0.61
SMAD1-216ENST00000515527 PTCD1O75127 700 aaKnown RBP18.87■□□□□ 0.61
SMAD1-216ENST00000515527 SLX4Q8IY92 1834 aa18.87■□□□□ 0.61
SMAD1-216ENST00000515527 PDE6BP35913 854 aa18.86■□□□□ 0.61
SMAD1-216ENST00000515527 NOGQ13253 232 aa18.86■□□□□ 0.61
SMAD1-216ENST00000515527 HHIPL1Q96JK4 782 aa18.86■□□□□ 0.61
SMAD1-216ENST00000515527 ZIC5Q96T25 663 aa18.86■□□□□ 0.61
SMAD1-216ENST00000515527 PDZRN3Q9UPQ7 1066 aa18.86■□□□□ 0.61
SMAD1-216ENST00000515527 ANKRD31Q8N7Z5 1873 aa18.86■□□□□ 0.61
SMAD1-216ENST00000515527 COL11A2P13942 1736 aaPredicted RBP18.86■□□□□ 0.61
SMAD1-216ENST00000515527 INSRP06213 1382 aa18.85■□□□□ 0.61
SMAD1-216ENST00000515527 CELF2O95319 508 aaKnown RBP18.85■□□□□ 0.61
SMAD1-216ENST00000515527 LMOD1P29536 600 aaPredicted RBP18.85■□□□□ 0.61
SMAD1-216ENST00000515527 SAGE1Q9NXZ1 904 aa18.84■□□□□ 0.61
SMAD1-216ENST00000515527 MKI67P46013 3256 aaKnown RBP18.83■□□□□ 0.61
SMAD1-216ENST00000515527 AKAP4Q5JQC9 854 aa18.83■□□□□ 0.6
SMAD1-216ENST00000515527 PRPF40BQ6NWY9 871 aaKnown RBP18.83■□□□□ 0.6
SMAD1-216ENST00000515527 GPC2Q8N158 579 aa18.83■□□□□ 0.6
SMAD1-216ENST00000515527 CNKSR1Q969H4 720 aa18.83■□□□□ 0.6
SMAD1-216ENST00000515527 ZNF277Q9NRM2 450 aaPredicted RBP18.83■□□□□ 0.6
SMAD1-216ENST00000515527 SZT2Q5T011 3432 aa18.83■□□□□ 0.6
SMAD1-216ENST00000515527 INTS5Q6P9B9 1019 aaKnown RBP18.82■□□□□ 0.6
SMAD1-216ENST00000515527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMAD1-216ENST00000515527 ERVV-2B6SEH9 535 aa18.81■□□□□ 0.6
SMAD1-216ENST00000515527 TRPA1O75762 1119 aa18.81■□□□□ 0.6
SMAD1-216ENST00000515527 BRIP1Q9BX63 1249 aa18.81■□□□□ 0.6
SMAD1-216ENST00000515527 NARFQ9UHQ1 456 aa18.81■□□□□ 0.6
SMAD1-216ENST00000515527 CCDC24Q8N4L8 307 aa18.8■□□□□ 0.6
SMAD1-216ENST00000515527 ZNF408Q9H9D4 720 aa18.8■□□□□ 0.6
SMAD1-216ENST00000515527 GJA3Q9Y6H8 435 aa18.8■□□□□ 0.6
SMAD1-216ENST00000515527 AKAP11Q9UKA4 1901 aa18.8■□□□□ 0.6
SMAD1-216ENST00000515527 PITPNM2Q9BZ72 1349 aa18.79■□□□□ 0.6
SMAD1-216ENST00000515527 CCDC93Q567U6 631 aa18.79■□□□□ 0.6
SMAD1-216ENST00000515527 COLQQ9Y215 455 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms