RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
TRIO-222ENST00000515144 UHRF1BP1LA0JNW5 1464 aa16.94■□□□□ 0.3
TRIO-222ENST00000515144 HAND2P61296 217 aa16.93■□□□□ 0.3
TRIO-222ENST00000515144 DEF6Q9H4E7 631 aa16.93■□□□□ 0.3
TRIO-222ENST00000515144 CHPF2Q9P2E5 772 aa16.93■□□□□ 0.3
TRIO-222ENST00000515144 WDR7Q9Y4E6 1490 aa16.93■□□□□ 0.3
TRIO-222ENST00000515144 NFATC2IPQ8NCF5 419 aa16.93■□□□□ 0.3
TRIO-222ENST00000515144 SSH1Q8WYL5 1049 aa16.93■□□□□ 0.3
TRIO-222ENST00000515144 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
TRIO-222ENST00000515144 A2MP01023 1474 aa16.93■□□□□ 0.3
TRIO-222ENST00000515144 HMGB2P26583 209 aaKnown RBP16.93■□□□□ 0.3
TRIO-222ENST00000515144 GSE1Q14687 1217 aa16.93■□□□□ 0.3
TRIO-222ENST00000515144 TNNT3P45378 269 aaPredicted RBP16.93■□□□□ 0.3
TRIO-222ENST00000515144 TNIP1Q15025 636 aa16.93■□□□□ 0.3
TRIO-222ENST00000515144 ZNF408Q9H9D4 720 aa16.93■□□□□ 0.3
TRIO-222ENST00000515144 RIMS2Q9UQ26 1411 aa16.92■□□□□ 0.3
TRIO-222ENST00000515144 PI4KAP2A4QPH2 592 aa16.92■□□□□ 0.3
TRIO-222ENST00000515144 POLD1P28340 1107 aa16.92■□□□□ 0.3
TRIO-222ENST00000515144 PI4KAP1Q8N8J0 262 aa16.92■□□□□ 0.3
TRIO-222ENST00000515144 CCT2P78371 535 aaKnown RBP16.92■□□□□ 0.3
TRIO-222ENST00000515144 STIM1Q13586 685 aa16.92■□□□□ 0.3
TRIO-222ENST00000515144 ZNF213O14771 459 aa16.92■□□□□ 0.3
TRIO-222ENST00000515144 PARP3Q9Y6F1 533 aa16.92■□□□□ 0.3
TRIO-222ENST00000515144 FAM98CQ17RN3 349 aaKnown RBP16.92■□□□□ 0.3
TRIO-222ENST00000515144 PDE3AQ14432 1141 aa16.92■□□□□ 0.3
TRIO-222ENST00000515144 RTCBQ9Y3I0 505 aaKnown RBP16.91■□□□□ 0.3
TRIO-222ENST00000515144 SAMM50Q9Y512 469 aa16.91■□□□□ 0.3
TRIO-222ENST00000515144 CCDC173Q0VFZ6 552 aa16.91■□□□□ 0.3
TRIO-222ENST00000515144 C11orf95C9JLR9 678 aaPredicted RBP16.91■□□□□ 0.3
TRIO-222ENST00000515144 SKAP1Q86WV1 359 aa16.91■□□□□ 0.3
TRIO-222ENST00000515144 ATP10BO94823 1461 aa16.91■□□□□ 0.3
TRIO-222ENST00000515144 CDKL5O76039 1030 aa16.9■□□□□ 0.3
TRIO-222ENST00000515144 SLF2Q8IX21 1173 aa16.9■□□□□ 0.3
TRIO-222ENST00000515144 U3KPZ7 1027 aaPredicted RBP16.9■□□□□ 0.3
TRIO-222ENST00000515144 PRPF40BQ6NWY9 871 aaKnown RBP16.9■□□□□ 0.3
TRIO-222ENST00000515144 CUL5Q93034 780 aa16.9■□□□□ 0.3
TRIO-222ENST00000515144 CCDC152Q4G0S7 254 aa16.9■□□□□ 0.3
TRIO-222ENST00000515144 SNRPA1P09661 255 aaKnown RBP16.89■□□□□ 0.3
TRIO-222ENST00000515144 NBPF14Q5TI25 921 aa16.89■□□□□ 0.29
TRIO-222ENST00000515144 CEP57L1Q8IYX8 460 aa16.89■□□□□ 0.29
TRIO-222ENST00000515144 IQCA1Q86XH1 822 aa16.89■□□□□ 0.29
TRIO-222ENST00000515144 TNMDQ9H2S6 317 aa16.89■□□□□ 0.29
TRIO-222ENST00000515144 BMP2KQ9NSY1 1161 aaPredicted RBP16.89■□□□□ 0.29
TRIO-222ENST00000515144 FANCIQ9NVI1 1328 aa16.89■□□□□ 0.29
TRIO-222ENST00000515144 FAM13BQ9NYF5 915 aa16.89■□□□□ 0.29
TRIO-222ENST00000515144 NEBLO76041 1014 aa16.89■□□□□ 0.29
TRIO-222ENST00000515144 CCDC83Q8IWF9 413 aa16.89■□□□□ 0.29
TRIO-222ENST00000515144 OGFOD1Q8N543 542 aa16.88■□□□□ 0.29
TRIO-222ENST00000515144 SMARCE1Q969G3 411 aa16.88■□□□□ 0.29
TRIO-222ENST00000515144 MYO5CQ9NQX4 1742 aa16.88■□□□□ 0.29
TRIO-222ENST00000515144 IFIT3O14879 490 aaKnown RBP16.88■□□□□ 0.29
TRIO-222ENST00000515144 FLIIQ13045 1269 aa16.88■□□□□ 0.29
TRIO-222ENST00000515144 CCDC24Q8N4L8 307 aa16.88■□□□□ 0.29
TRIO-222ENST00000515144 ZNF518AQ6AHZ1 1483 aa16.88■□□□□ 0.29
TRIO-222ENST00000515144 JMYQ8N9B5 988 aa16.88■□□□□ 0.29
TRIO-222ENST00000515144 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
TRIO-222ENST00000515144 TSPY2A6NKD2 308 aa16.88■□□□□ 0.29
TRIO-222ENST00000515144 NOM1Q5C9Z4 860 aaKnown RBP16.88■□□□□ 0.29
TRIO-222ENST00000515144 DISP3Q9P2K9 1392 aa16.88■□□□□ 0.29
TRIO-222ENST00000515144 NFKBIBQ15653 356 aa16.88■□□□□ 0.29
TRIO-222ENST00000515144 GNPATO15228 680 aa16.87■□□□□ 0.29
TRIO-222ENST00000515144 RABEP1Q15276 862 aa16.87■□□□□ 0.29
TRIO-222ENST00000515144 SLC12A7Q9Y666 1083 aa16.87■□□□□ 0.29
TRIO-222ENST00000515144 PPP4R3AQ6IN85 833 aa16.87■□□□□ 0.29
TRIO-222ENST00000515144 MNS1Q8NEH6 495 aa16.87■□□□□ 0.29
TRIO-222ENST00000515144 ANKRD18AQ8IVF6 992 aa16.87■□□□□ 0.29
TRIO-222ENST00000515144 GPS2Q13227 327 aa16.87■□□□□ 0.29
TRIO-222ENST00000515144 ANKRD13DQ6ZTN6 518 aa16.87■□□□□ 0.29
TRIO-222ENST00000515144 IL2RBP14784 551 aa16.87■□□□□ 0.29
TRIO-222ENST00000515144 MX1P20591 662 aa16.87■□□□□ 0.29
TRIO-222ENST00000515144 SLFN5Q08AF3 891 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 CAMK4Q16566 473 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 DZIP3Q86Y13 1208 aaKnown RBP16.86■□□□□ 0.29
TRIO-222ENST00000515144 DHX29Q7Z478 1369 aaKnown RBP16.86■□□□□ 0.29
TRIO-222ENST00000515144 ABCC1P33527 1531 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 XAGE3Q8WTP9 111 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 KIF1BO60333 1816 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 KLHL10Q6JEL2 608 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 NCOA1Q15788 1441 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 RAB11FIP3O75154 756 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 NASPP49321 788 aaPredicted RBP16.86■□□□□ 0.29
TRIO-222ENST00000515144 COPS6Q7L5N1 327 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 TEX13AQ9BXU3 409 aaPredicted RBP16.86■□□□□ 0.29
TRIO-222ENST00000515144 NEFHP12036 1026 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 MCM2P49736 904 aa16.86■□□□□ 0.29
TRIO-222ENST00000515144 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 NLRP3Q96P20 1036 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 GPATCH8Q9UKJ3 1502 aaKnown RBP16.85■□□□□ 0.29
TRIO-222ENST00000515144 NLRP5P59047 1200 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 AAMPQ13685 434 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 SPATA32Q96LK8 384 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 STX8Q9UNK0 236 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 BAG3O95817 575 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 HLA-DOAP06340 250 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 ENOX2Q16206 610 aaKnown RBP16.85■□□□□ 0.29
TRIO-222ENST00000515144 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 SCAF11Q99590 1463 aaKnown RBP16.85■□□□□ 0.29
TRIO-222ENST00000515144 CHD1O14646 1710 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 C20orf194Q5TEA3 1177 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms