RNA–Protein interactions for RNA: ENST00000515143.5

SPOCK3-223, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-223ENST00000515143 TJP1Q07157 1748 aa9.7□□□□□ -0.86
SPOCK3-223ENST00000515143 POLRMTO00411 1230 aaKnown RBP9.69□□□□□ -0.86
SPOCK3-223ENST00000515143 ADCY9O60503 1353 aa9.69□□□□□ -0.86
SPOCK3-223ENST00000515143 PRKAR2BP31323 418 aa9.69□□□□□ -0.86
SPOCK3-223ENST00000515143 TEFQ10587 303 aa9.69□□□□□ -0.86
SPOCK3-223ENST00000515143 FKBP8Q14318 412 aa9.69□□□□□ -0.86
SPOCK3-223ENST00000515143 UBR2Q8IWV8 1755 aa9.69□□□□□ -0.86
SPOCK3-223ENST00000515143 ZNF496Q96IT1 587 aaPredicted RBP9.69□□□□□ -0.86
SPOCK3-223ENST00000515143 PLEKHF1Q96S99 279 aa9.69□□□□□ -0.86
SPOCK3-223ENST00000515143 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
SPOCK3-223ENST00000515143 HEG1Q9ULI3 1381 aa9.69□□□□□ -0.86
SPOCK3-223ENST00000515143 PXDNLA1KZ92 1463 aa9.68□□□□□ -0.86
SPOCK3-223ENST00000515143 IL6STP40189 918 aaPredicted RBP9.68□□□□□ -0.86
SPOCK3-223ENST00000515143 DDR1Q08345 913 aa9.68□□□□□ -0.86
SPOCK3-223ENST00000515143 FMNL2Q96PY5 1086 aa9.68□□□□□ -0.86
SPOCK3-223ENST00000515143 PARP3Q9Y6F1 533 aa9.68□□□□□ -0.86
SPOCK3-223ENST00000515143 A0A087WZG4 1122 aa9.67□□□□□ -0.86
SPOCK3-223ENST00000515143 ZPR1O75312 459 aa9.67□□□□□ -0.86
SPOCK3-223ENST00000515143 U2AF1L5P0DN76 240 aaPredicted RBP9.67□□□□□ -0.86
SPOCK3-223ENST00000515143 U2AF1Q01081 240 aaKnown RBP eCLIP9.67□□□□□ -0.86
SPOCK3-223ENST00000515143 RALBP1Q15311 655 aa9.67□□□□□ -0.86
SPOCK3-223ENST00000515143 KLHL34Q8N239 644 aa9.67□□□□□ -0.86
SPOCK3-223ENST00000515143 SRP68Q9UHB9 627 aaKnown RBP9.67□□□□□ -0.86
SPOCK3-223ENST00000515143 ZBTB1Q9Y2K1 713 aa9.67□□□□□ -0.86
SPOCK3-223ENST00000515143 SIPA1L3O60292 1781 aaPredicted RBP9.67□□□□□ -0.86
SPOCK3-223ENST00000515143 C4AP0C0L4 1744 aa9.67□□□□□ -0.86
SPOCK3-223ENST00000515143 KIAA1551Q9HCM1 1747 aa9.67□□□□□ -0.86
SPOCK3-223ENST00000515143 A0A0G2JLW4 131 aa9.66□□□□□ -0.86
SPOCK3-223ENST00000515143 NFIXQ14938 502 aa9.66□□□□□ -0.86
SPOCK3-223ENST00000515143 TAF7Q15545 349 aaPredicted RBP9.66□□□□□ -0.86
SPOCK3-223ENST00000515143 USPL1Q5W0Q7 1092 aa9.66□□□□□ -0.86
SPOCK3-223ENST00000515143 CLEC4GQ6UXB4 293 aa9.66□□□□□ -0.86
SPOCK3-223ENST00000515143 TTC5Q8N0Z6 440 aa9.66□□□□□ -0.86
SPOCK3-223ENST00000515143 PNNQ9H307 717 aaKnown RBP9.66□□□□□ -0.86
SPOCK3-223ENST00000515143 PDZRN3Q9UPQ7 1066 aa9.66□□□□□ -0.86
SPOCK3-223ENST00000515143 COL15A1P39059 1388 aa9.65□□□□□ -0.86
SPOCK3-223ENST00000515143 BTBD11A6QL63 1104 aa9.65□□□□□ -0.86
SPOCK3-223ENST00000515143 SNRPA1P09661 255 aaKnown RBP9.65□□□□□ -0.86
SPOCK3-223ENST00000515143 DPEP1P16444 411 aa9.65□□□□□ -0.86
SPOCK3-223ENST00000515143 C1QTNF8P60827 252 aa9.65□□□□□ -0.86
SPOCK3-223ENST00000515143 BABAM1Q9NWV8 329 aa9.65□□□□□ -0.86
SPOCK3-223ENST00000515143 PIM2Q9P1W9 311 aa9.65□□□□□ -0.86
SPOCK3-223ENST00000515143 VIRMAQ69YN4 1812 aaKnown RBP9.65□□□□□ -0.86
SPOCK3-223ENST00000515143 NRXN2Q9P2S2 1712 aa9.65□□□□□ -0.87
SPOCK3-223ENST00000515143 KCNQ3O43525 872 aa9.64□□□□□ -0.87
SPOCK3-223ENST00000515143 C1QBPQ07021 282 aaKnown RBP9.64□□□□□ -0.87
SPOCK3-223ENST00000515143 PNISRQ8TF01 805 aaKnown RBP9.64□□□□□ -0.87
SPOCK3-223ENST00000515143 RTF1Q92541 710 aaKnown RBP9.64□□□□□ -0.87
SPOCK3-223ENST00000515143 USP16Q9Y5T5 823 aa9.64□□□□□ -0.87
SPOCK3-223ENST00000515143 CAMTA2O94983 1202 aa9.63□□□□□ -0.87
SPOCK3-223ENST00000515143 A1BGP04217 495 aa9.63□□□□□ -0.87
SPOCK3-223ENST00000515143 SERPINB2P05120 415 aa9.63□□□□□ -0.87
SPOCK3-223ENST00000515143 NFE2L2Q16236 605 aa9.63□□□□□ -0.87
SPOCK3-223ENST00000515143 PELP1Q8IZL8 1130 aaKnown RBP9.63□□□□□ -0.87
SPOCK3-223ENST00000515143 BRCA1P38398 1863 aaKnown RBP9.62□□□□□ -0.87
SPOCK3-223ENST00000515143 KLRG2A4D1S0 409 aaPredicted RBP9.62□□□□□ -0.87
SPOCK3-223ENST00000515143 CANXP27824 592 aaKnown RBP9.62□□□□□ -0.87
SPOCK3-223ENST00000515143 MCM10Q7L590 875 aa9.62□□□□□ -0.87
SPOCK3-223ENST00000515143 BRIP1Q9BX63 1249 aa9.62□□□□□ -0.87
SPOCK3-223ENST00000515143 NBPF26B4DH59 902 aa9.61□□□□□ -0.87
SPOCK3-223ENST00000515143 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
SPOCK3-223ENST00000515143 DALRD3Q5D0E6 543 aaKnown RBP9.61□□□□□ -0.87
SPOCK3-223ENST00000515143 NBPF10Q6P3W6 841 aaKnown RBP9.61□□□□□ -0.87
SPOCK3-223ENST00000515143 NBPF15Q8N660 670 aa9.61□□□□□ -0.87
SPOCK3-223ENST00000515143 ATP10DQ9P241 1426 aa9.6□□□□□ -0.87
SPOCK3-223ENST00000515143 EIF4A1P60842 406 aaKnown RBP9.6□□□□□ -0.87
SPOCK3-223ENST00000515143 DCTN1Q14203 1278 aa9.6□□□□□ -0.87
SPOCK3-223ENST00000515143 TBC1D9BQ66K14 1250 aa9.6□□□□□ -0.87
SPOCK3-223ENST00000515143 SAMD1Q6SPF0 538 aaPredicted RBP9.6□□□□□ -0.87
SPOCK3-223ENST00000515143 BCS1LQ9Y276 419 aa9.6□□□□□ -0.87
SPOCK3-223ENST00000515143 ZC3H4Q9UPT8 1303 aaKnown RBP9.59□□□□□ -0.87
SPOCK3-223ENST00000515143 ARFGEF1Q9Y6D6 1849 aa9.59□□□□□ -0.87
SPOCK3-223ENST00000515143 ERVV-1B6SEH8 477 aa9.59□□□□□ -0.87
SPOCK3-223ENST00000515143 KIF3CO14782 793 aa9.59□□□□□ -0.87
SPOCK3-223ENST00000515143 NEFMP07197 916 aa9.59□□□□□ -0.87
SPOCK3-223ENST00000515143 CNGB1Q14028 1251 aaPredicted RBP9.59□□□□□ -0.87
SPOCK3-223ENST00000515143 ARHGAP27Q6ZUM4 889 aa9.59□□□□□ -0.87
SPOCK3-223ENST00000515143 TTLL6Q8N841 843 aa9.59□□□□□ -0.87
SPOCK3-223ENST00000515143 SPINK5Q9NQ38 1064 aaPredicted RBP9.59□□□□□ -0.87
SPOCK3-223ENST00000515143 TBC1D2BQ9UPU7 963 aa9.59□□□□□ -0.87
SPOCK3-223ENST00000515143 ERBB4Q15303 1308 aa9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 MYBBP1AQ9BQG0 1328 aaKnown RBP9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 N4BP2Q86UW6 1770 aaPredicted RBP9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 PRAMEF22A3QJZ6 481 aa9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 H0YIN7 160 aa9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 CHRNA5P30532 468 aa9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 PDE6BP35913 854 aa9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 TMPOP42166 694 aaKnown RBP9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 DDX10Q13206 875 aaKnown RBP9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 PRR5LQ6MZQ0 368 aa9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 LRP10Q7Z4F1 713 aa9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 DZIP3Q86Y13 1208 aaKnown RBP9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 SETDB2Q96T68 719 aa9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 GPBP1L1Q9HC44 474 aaPredicted RBP9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 CARMIL3Q8ND23 1372 aa9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 AFDNP55196 1824 aaKnown RBP9.58□□□□□ -0.88
SPOCK3-223ENST00000515143 CHL1O00533 1208 aa9.57□□□□□ -0.88
SPOCK3-223ENST00000515143 SRGNP10124 158 aa9.57□□□□□ -0.88
SPOCK3-223ENST00000515143 STYK1Q6J9G0 422 aa9.57□□□□□ -0.88
SPOCK3-223ENST00000515143 C7orf43Q8WVR3 580 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms