RNA–Protein interactions for RNA: ENST00000515129.5

SEMA6A-215, Transcript of semaphorin 6A, humanhuman

TSL 2

Gene SEMA6A, Length 2,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-215ENST00000515129 PTGER2P43116 358 aa13.74□□□□□ -0.21
SEMA6A-215ENST00000515129 NBR1Q14596 966 aa13.74□□□□□ -0.21
SEMA6A-215ENST00000515129 NKX1-1Q15270 411 aaPredicted RBP13.74□□□□□ -0.21
SEMA6A-215ENST00000515129 ATF5Q9Y2D1 282 aaPredicted RBP13.74□□□□□ -0.21
SEMA6A-215ENST00000515129 LY75O60449 1722 aa13.73□□□□□ -0.21
SEMA6A-215ENST00000515129 ZNF853P0CG23 659 aa13.73□□□□□ -0.21
SEMA6A-215ENST00000515129 UPF2Q9HAU5 1272 aaKnown RBP13.73□□□□□ -0.21
SEMA6A-215ENST00000515129 SLC27A3Q5K4L6 730 aa13.73□□□□□ -0.21
SEMA6A-215ENST00000515129 MPRIPQ6WCQ1 1025 aa13.73□□□□□ -0.21
SEMA6A-215ENST00000515129 TMEM57Q8N5G2 664 aa13.73□□□□□ -0.21
SEMA6A-215ENST00000515129 VAMP4O75379 141 aa13.72□□□□□ -0.21
SEMA6A-215ENST00000515129 DCTN1Q14203 1278 aa13.72□□□□□ -0.21
SEMA6A-215ENST00000515129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
SEMA6A-215ENST00000515129 SPG7Q9UQ90 795 aa13.72□□□□□ -0.21
SEMA6A-215ENST00000515129 PHKG2P15735 406 aa13.72□□□□□ -0.21
SEMA6A-215ENST00000515129 PIGBQ92521 554 aa13.72□□□□□ -0.21
SEMA6A-215ENST00000515129 SGIP1Q9BQI5 828 aa13.72□□□□□ -0.21
SEMA6A-215ENST00000515129 MBIPQ9NS73 344 aa13.72□□□□□ -0.21
SEMA6A-215ENST00000515129 ZBTB40Q9NUA8 1239 aa13.72□□□□□ -0.21
SEMA6A-215ENST00000515129 ITGB4P16144 1822 aa13.71□□□□□ -0.21
SEMA6A-215ENST00000515129 TWISTNBQ3B726 338 aaPredicted RBP13.7□□□□□ -0.22
SEMA6A-215ENST00000515129 CCNL1Q9UK58 526 aaPredicted RBP13.7□□□□□ -0.22
SEMA6A-215ENST00000515129 PNPLA7Q6ZV29 1317 aa13.7□□□□□ -0.22
SEMA6A-215ENST00000515129 MRPL50Q8N5N7 158 aaKnown RBP13.7□□□□□ -0.22
SEMA6A-215ENST00000515129 API5Q9BZZ5 524 aaKnown RBP13.69□□□□□ -0.22
SEMA6A-215ENST00000515129 TUBGCP6Q96RT7 1819 aa13.69□□□□□ -0.22
SEMA6A-215ENST00000515129 IFNL2Q8IZJ0 200 aa13.69□□□□□ -0.22
SEMA6A-215ENST00000515129 PALLDQ8WX93 1383 aa13.68□□□□□ -0.22
SEMA6A-215ENST00000515129 SMC5Q8IY18 1101 aa13.68□□□□□ -0.22
SEMA6A-215ENST00000515129 MTFR1LQ9H019 292 aa13.68□□□□□ -0.22
SEMA6A-215ENST00000515129 PPP1R1BQ9UD71 204 aaPredicted RBP13.68□□□□□ -0.22
SEMA6A-215ENST00000515129 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
SEMA6A-215ENST00000515129 TSPYL6Q8N831 410 aa13.67□□□□□ -0.22
SEMA6A-215ENST00000515129 TFCP2L1Q9NZI6 479 aa13.67□□□□□ -0.22
SEMA6A-215ENST00000515129 ASAP1Q9ULH1 1129 aa13.67□□□□□ -0.22
SEMA6A-215ENST00000515129 KDRP35968 1356 aa13.66□□□□□ -0.22
SEMA6A-215ENST00000515129 BECN1Q14457 450 aa13.66□□□□□ -0.22
SEMA6A-215ENST00000515129 ELL2O00472 640 aaPredicted RBP13.66□□□□□ -0.22
SEMA6A-215ENST00000515129 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
SEMA6A-215ENST00000515129 DLG5Q8TDM6 1919 aa13.65□□□□□ -0.22
SEMA6A-215ENST00000515129 QSER1Q2KHR3 1735 aa13.65□□□□□ -0.22
SEMA6A-215ENST00000515129 UTRNP46939 3433 aa13.65□□□□□ -0.22
SEMA6A-215ENST00000515129 KDM6AO15550 1401 aaPredicted RBP13.65□□□□□ -0.22
SEMA6A-215ENST00000515129 PLEKHO1Q53GL0 409 aaPredicted RBP13.65□□□□□ -0.22
SEMA6A-215ENST00000515129 MCM10Q7L590 875 aa13.65□□□□□ -0.22
SEMA6A-215ENST00000515129 COL23A1Q86Y22 540 aaPredicted RBP13.65□□□□□ -0.22
SEMA6A-215ENST00000515129 C8orf58Q8NAV2 365 aa13.65□□□□□ -0.22
SEMA6A-215ENST00000515129 ATG3Q9NT62 314 aa13.65□□□□□ -0.22
SEMA6A-215ENST00000515129 PLEKHG2Q9H7P9 1386 aa13.65□□□□□ -0.22
SEMA6A-215ENST00000515129 ZBTB7BO15156 539 aaPredicted RBP13.64□□□□□ -0.23
SEMA6A-215ENST00000515129 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
SEMA6A-215ENST00000515129 ZNF530Q6P9A1 599 aaPredicted RBP13.64□□□□□ -0.23
SEMA6A-215ENST00000515129 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
SEMA6A-215ENST00000515129 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
SEMA6A-215ENST00000515129 TMOD3Q9NYL9 352 aa13.64□□□□□ -0.23
SEMA6A-215ENST00000515129 ABCC4O15439 1325 aa13.64□□□□□ -0.23
SEMA6A-215ENST00000515129 TAF1LQ8IZX4 1826 aa13.64□□□□□ -0.23
SEMA6A-215ENST00000515129 CHL1O00533 1208 aa13.64□□□□□ -0.23
SEMA6A-215ENST00000515129 FHDC1Q9C0D6 1143 aaPredicted RBP13.64□□□□□ -0.23
SEMA6A-215ENST00000515129 C5P01031 1676 aa13.64□□□□□ -0.23
SEMA6A-215ENST00000515129 NUCB1Q02818 461 aa13.63□□□□□ -0.23
SEMA6A-215ENST00000515129 ITPK1Q13572 414 aa13.63□□□□□ -0.23
SEMA6A-215ENST00000515129 SMARCC1Q92922 1105 aaPredicted RBP13.63□□□□□ -0.23
SEMA6A-215ENST00000515129 SLC4A9Q96Q91 983 aa13.63□□□□□ -0.23
SEMA6A-215ENST00000515129 LOC102724428A0A0B4J2F2 783 aa13.63□□□□□ -0.23
SEMA6A-215ENST00000515129 SIK1P57059 783 aa13.63□□□□□ -0.23
SEMA6A-215ENST00000515129 AMOTQ4VCS5 1084 aa13.63□□□□□ -0.23
SEMA6A-215ENST00000515129 LINC00116Q8NCU8 138 aa13.63□□□□□ -0.23
SEMA6A-215ENST00000515129 DCAF5Q96JK2 942 aa13.63□□□□□ -0.23
SEMA6A-215ENST00000515129 GAS2L2Q8NHY3 880 aa13.62□□□□□ -0.23
SEMA6A-215ENST00000515129 SYT17Q9BSW7 474 aa13.62□□□□□ -0.23
SEMA6A-215ENST00000515129 COL24A1Q17RW2 1714 aa13.62□□□□□ -0.23
SEMA6A-215ENST00000515129 ERVV-2B6SEH9 535 aa13.61□□□□□ -0.23
SEMA6A-215ENST00000515129 SEC24BO95487 1268 aa13.61□□□□□ -0.23
SEMA6A-215ENST00000515129 SLC16A10Q8TF71 515 aa13.61□□□□□ -0.23
SEMA6A-215ENST00000515129 DEKP35659 375 aaKnown RBP13.61□□□□□ -0.23
SEMA6A-215ENST00000515129 SLC4A3P48751 1232 aa13.61□□□□□ -0.23
SEMA6A-215ENST00000515129 CHD1LQ86WJ1 897 aa13.61□□□□□ -0.23
SEMA6A-215ENST00000515129 TBC1D32Q96NH3 1257 aa13.61□□□□□ -0.23
SEMA6A-215ENST00000515129 GOLGB1Q14789 3259 aaKnown RBP13.61□□□□□ -0.23
SEMA6A-215ENST00000515129 C4BP0C0L5 1744 aa13.61□□□□□ -0.23
SEMA6A-215ENST00000515129 HTATSF1O43719 755 aaKnown RBP13.6□□□□□ -0.23
SEMA6A-215ENST00000515129 KRT24Q2M2I5 525 aa13.6□□□□□ -0.23
SEMA6A-215ENST00000515129 MIS18AQ9NYP9 233 aa13.6□□□□□ -0.23
SEMA6A-215ENST00000515129 PTPRCP08575 1304 aa13.59□□□□□ -0.23
SEMA6A-215ENST00000515129 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
SEMA6A-215ENST00000515129 MSL1Q68DK7 614 aa13.59□□□□□ -0.23
SEMA6A-215ENST00000515129 LGR6Q9HBX8 967 aa13.59□□□□□ -0.23
SEMA6A-215ENST00000515129 VIRMAQ69YN4 1812 aaKnown RBP13.59□□□□□ -0.23
SEMA6A-215ENST00000515129 ATP6V1AP38606 617 aa13.58□□□□□ -0.23
SEMA6A-215ENST00000515129 INTS3Q68E01 1043 aaKnown RBP13.58□□□□□ -0.23
SEMA6A-215ENST00000515129 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.23
SEMA6A-215ENST00000515129 CABP4P57796 275 aa13.58□□□□□ -0.24
SEMA6A-215ENST00000515129 C1orf141Q5JVX7 400 aa13.58□□□□□ -0.24
SEMA6A-215ENST00000515129 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
SEMA6A-215ENST00000515129 ANKRD45Q5TZF3 282 aa13.57□□□□□ -0.24
SEMA6A-215ENST00000515129 LNPKQ9C0E8 428 aa13.57□□□□□ -0.24
SEMA6A-215ENST00000515129 EIF5BO60841 1220 aaKnown RBP13.57□□□□□ -0.24
SEMA6A-215ENST00000515129 PHF14O94880 888 aa13.57□□□□□ -0.24
SEMA6A-215ENST00000515129 AKAP4Q5JQC9 854 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms