RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 C1QTNF9BB2RNN3 333 aa9.59□□□□□ -0.87
NEDD4-211ENST00000514893 STAU1O95793 577 aaKnown RBP9.59□□□□□ -0.87
NEDD4-211ENST00000514893 ADH6P28332 368 aa9.59□□□□□ -0.87
NEDD4-211ENST00000514893 ARSJQ5FYB0 599 aaPredicted RBP9.59□□□□□ -0.87
NEDD4-211ENST00000514893 FAM182BQ5T319 152 aa9.59□□□□□ -0.87
NEDD4-211ENST00000514893 AVENQ9NQS1 362 aaPredicted RBP9.59□□□□□ -0.87
NEDD4-211ENST00000514893 NBPF1Q3BBV0 1214 aa9.58□□□□□ -0.88
NEDD4-211ENST00000514893 DNAAF2Q9NVR5 837 aaKnown RBP9.58□□□□□ -0.88
NEDD4-211ENST00000514893 A0A1W2PNR3 127 aa9.57□□□□□ -0.88
NEDD4-211ENST00000514893 CDK2AP1O14519 115 aa9.57□□□□□ -0.88
NEDD4-211ENST00000514893 TATP17735 454 aaPredicted RBP9.57□□□□□ -0.88
NEDD4-211ENST00000514893 SCNN1DP51172 638 aa9.57□□□□□ -0.88
NEDD4-211ENST00000514893 MAPTP10636 758 aaKnown RBP9.56□□□□□ -0.88
NEDD4-211ENST00000514893 DGKGP49619 791 aa9.56□□□□□ -0.88
NEDD4-211ENST00000514893 TNP2Q05952 138 aa9.56□□□□□ -0.88
NEDD4-211ENST00000514893 IRF5Q13568 498 aa9.56□□□□□ -0.88
NEDD4-211ENST00000514893 WASHC4Q2M389 1173 aa9.56□□□□□ -0.88
NEDD4-211ENST00000514893 CHSY3Q70JA7 882 aa9.56□□□□□ -0.88
NEDD4-211ENST00000514893 CD163Q86VB7 1156 aa9.56□□□□□ -0.88
NEDD4-211ENST00000514893 GJA3Q9Y6H8 435 aa9.56□□□□□ -0.88
NEDD4-211ENST00000514893 ATP4AP20648 1035 aa9.55□□□□□ -0.88
NEDD4-211ENST00000514893 SLC4A9Q96Q91 983 aa9.55□□□□□ -0.88
NEDD4-211ENST00000514893 PRR12Q9ULL5 1215 aa9.55□□□□□ -0.88
NEDD4-211ENST00000514893 KHNYNO15037 678 aaKnown RBP9.54□□□□□ -0.88
NEDD4-211ENST00000514893 VAC14Q08AM6 782 aa9.54□□□□□ -0.88
NEDD4-211ENST00000514893 SEMA3FQ13275 785 aa9.54□□□□□ -0.88
NEDD4-211ENST00000514893 Q8N3U1 123 aa9.54□□□□□ -0.88
NEDD4-211ENST00000514893 ZDHHC3Q9NYG2 299 aa9.54□□□□□ -0.88
NEDD4-211ENST00000514893 A6NJY4 79 aa9.53□□□□□ -0.88
NEDD4-211ENST00000514893 PLPP7Q8NBV4 271 aa9.53□□□□□ -0.88
NEDD4-211ENST00000514893 SERTAD1Q9UHV2 236 aa9.53□□□□□ -0.88
NEDD4-211ENST00000514893 DCDC2BA2VCK2 349 aa9.52□□□□□ -0.89
NEDD4-211ENST00000514893 CD33P20138 364 aa9.52□□□□□ -0.89
NEDD4-211ENST00000514893 SOX11P35716 441 aa9.52□□□□□ -0.89
NEDD4-211ENST00000514893 ZIC5Q96T25 663 aa9.52□□□□□ -0.89
NEDD4-211ENST00000514893 KLF15Q9UIH9 416 aa9.52□□□□□ -0.89
NEDD4-211ENST00000514893 ALAS2P22557 587 aa9.51□□□□□ -0.89
NEDD4-211ENST00000514893 MTFR1Q15390 333 aa9.51□□□□□ -0.89
NEDD4-211ENST00000514893 CABP1Q9NZU7 370 aa9.51□□□□□ -0.89
NEDD4-211ENST00000514893 SPDYE3A6NKU9 549 aa9.5□□□□□ -0.89
NEDD4-211ENST00000514893 BACH1O14867 736 aa9.5□□□□□ -0.89
NEDD4-211ENST00000514893 FAM157BP0CG42 384 aa9.5□□□□□ -0.89
NEDD4-211ENST00000514893 LAMC2Q13753 1193 aa9.5□□□□□ -0.89
NEDD4-211ENST00000514893 ZNF468Q5VIY5 522 aaPredicted RBP9.5□□□□□ -0.89
NEDD4-211ENST00000514893 BICDL1Q6ZP65 573 aa9.5□□□□□ -0.89
NEDD4-211ENST00000514893 FCHSD1Q86WN1 690 aa9.5□□□□□ -0.89
NEDD4-211ENST00000514893 GDPD2Q9HCC8 539 aa9.5□□□□□ -0.89
NEDD4-211ENST00000514893 MARK1Q9P0L2 795 aa9.5□□□□□ -0.89
NEDD4-211ENST00000514893 ABL2P42684 1182 aa9.49□□□□□ -0.89
NEDD4-211ENST00000514893 CHRNA4P43681 627 aa9.49□□□□□ -0.89
NEDD4-211ENST00000514893 PCBP4P57723 403 aaKnown RBP9.49□□□□□ -0.89
NEDD4-211ENST00000514893 SAMD5Q5TGI4 173 aa9.49□□□□□ -0.89
NEDD4-211ENST00000514893 PLVAPQ9BX97 442 aa9.49□□□□□ -0.89
NEDD4-211ENST00000514893 IQSEC3Q9UPP2 1182 aaPredicted RBP9.49□□□□□ -0.89
NEDD4-211ENST00000514893 TMEM229AB2RXF0 380 aa9.48□□□□□ -0.89
NEDD4-211ENST00000514893 SEMA6BQ9H3T3 888 aa9.48□□□□□ -0.89
NEDD4-211ENST00000514893 LZTS3O60299 673 aaPredicted RBP9.47□□□□□ -0.89
NEDD4-211ENST00000514893 SPATA31C1P0DKV0 1188 aa9.47□□□□□ -0.89
NEDD4-211ENST00000514893 GATA4P43694 442 aa9.47□□□□□ -0.89
NEDD4-211ENST00000514893 ZNF295-AS1Q8N0V1 137 aa9.47□□□□□ -0.89
NEDD4-211ENST00000514893 NEUROD4Q9HD90 331 aa9.47□□□□□ -0.89
NEDD4-211ENST00000514893 DOC2BQ14184 412 aa9.46□□□□□ -0.9
NEDD4-211ENST00000514893 HCN2Q9UL51 889 aa9.46□□□□□ -0.9
NEDD4-211ENST00000514893 PCDHGA11Q9Y5H2 935 aa9.46□□□□□ -0.9
NEDD4-211ENST00000514893 ELOA3CA0A087WX78 387 aaPredicted RBP9.45□□□□□ -0.9
NEDD4-211ENST00000514893 ELOA3DA6NLF2 546 aaPredicted RBP9.45□□□□□ -0.9
NEDD4-211ENST00000514893 EML3Q32P44 896 aa9.45□□□□□ -0.9
NEDD4-211ENST00000514893 ELOA3BQ3SY89 546 aa9.45□□□□□ -0.9
NEDD4-211ENST00000514893 ELOA3Q8NG57 546 aa9.45□□□□□ -0.9
NEDD4-211ENST00000514893 TRIM11Q96F44 468 aa9.45□□□□□ -0.9
NEDD4-211ENST00000514893 NOD1Q9Y239 953 aa9.45□□□□□ -0.9
NEDD4-211ENST00000514893 PRRT3Q5FWE3 981 aa9.44□□□□□ -0.9
NEDD4-211ENST00000514893 EFSO43281 561 aa9.43□□□□□ -0.9
NEDD4-211ENST00000514893 PARP3Q9Y6F1 533 aa9.43□□□□□ -0.9
NEDD4-211ENST00000514893 SYT9Q86SS6 491 aa9.42□□□□□ -0.9
NEDD4-211ENST00000514893 L3MBTL2Q969R5 705 aa9.42□□□□□ -0.9
NEDD4-211ENST00000514893 STRN4Q9NRL3 753 aa9.42□□□□□ -0.9
NEDD4-211ENST00000514893 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
NEDD4-211ENST00000514893 GPC6Q9Y625 555 aaPredicted RBP9.42□□□□□ -0.9
NEDD4-211ENST00000514893 SIN3BO75182 1162 aa9.41□□□□□ -0.9
NEDD4-211ENST00000514893 APBA3O96018 575 aa9.41□□□□□ -0.9
NEDD4-211ENST00000514893 TEAD4Q15561 434 aa9.41□□□□□ -0.9
NEDD4-211ENST00000514893 USP3Q9Y6I4 520 aa9.41□□□□□ -0.9
NEDD4-211ENST00000514893 ADARB2-AS1A8MUL3 147 aa9.4□□□□□ -0.9
NEDD4-211ENST00000514893 NOS2P35228 1153 aa9.4□□□□□ -0.9
NEDD4-211ENST00000514893 GTF2IP78347 998 aa9.4□□□□□ -0.9
NEDD4-211ENST00000514893 PSME1Q06323 249 aa9.4□□□□□ -0.9
NEDD4-211ENST00000514893 NEUROD1Q13562 356 aa9.4□□□□□ -0.9
NEDD4-211ENST00000514893 NFATC2IPQ8NCF5 419 aa9.4□□□□□ -0.9
NEDD4-211ENST00000514893 SKIP12755 728 aa9.39□□□□□ -0.91
NEDD4-211ENST00000514893 TXLNAP40222 546 aa9.39□□□□□ -0.91
NEDD4-211ENST00000514893 ZMYM1Q5SVZ6 1142 aa9.39□□□□□ -0.91
NEDD4-211ENST00000514893 LRRC69Q6ZNQ3 347 aa9.39□□□□□ -0.91
NEDD4-211ENST00000514893 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
NEDD4-211ENST00000514893 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
NEDD4-211ENST00000514893 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.38□□□□□ -0.91
NEDD4-211ENST00000514893 ZNF358Q9NW07 568 aa9.38□□□□□ -0.91
NEDD4-211ENST00000514893 EML1O00423 815 aa9.37□□□□□ -0.91
NEDD4-211ENST00000514893 WWC1Q8IX03 1113 aa9.37□□□□□ -0.91
NEDD4-211ENST00000514893 ZDHHC1Q8WTX9 485 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms