RNA–Protein interactions for RNA: ENST00000514515.5

NREP-222, Transcript of neuronal regeneration related protein, human

TSL 1 (best)

Gene NREP, Length 3,564 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NREP-222	ENST00000514515	NEURL4	Q96JN8	1562 aa		7.55	□□□□□ -1.2
NREP-222	ENST00000514515	USP32	Q8NFA0	1604 aa		7.55	□□□□□ -1.2
NREP-222	ENST00000514515	CD163L1	Q9NR16	1453 aa		7.55	□□□□□ -1.2
NREP-222	ENST00000514515	HSPA4	P34932	840 aa		7.55	□□□□□ -1.2
NREP-222	ENST00000514515	LARP1B	Q659C4	914 aa	Known RBP	7.55	□□□□□ -1.2
NREP-222	ENST00000514515	PRPF40B	Q6NWY9	871 aa	Known RBP	7.55	□□□□□ -1.2
NREP-222	ENST00000514515	FAM173B	Q6P4H8	233 aa		7.55	□□□□□ -1.2
NREP-222	ENST00000514515	RASEF	Q8IZ41	740 aa		7.55	□□□□□ -1.2
NREP-222	ENST00000514515	PDRG1	Q9NUG6	133 aa		7.55	□□□□□ -1.2
NREP-222	ENST00000514515	SNX14	Q9Y5W7	946 aa		7.55	□□□□□ -1.2
NREP-222	ENST00000514515	MROH1	Q8NDA8	1641 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	INO80	Q9ULG1	1556 aa	Predicted RBP	7.54	□□□□□ -1.2
NREP-222	ENST00000514515	TPM3	P06753	285 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	DMTN	Q08495	405 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	MTHFSD	Q2M296	383 aa	Known RBP	7.54	□□□□□ -1.2
NREP-222	ENST00000514515	PPP1R42	Q7Z4L9	355 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	PLEKHG5	O94827	1062 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	ZSCAN20	P17040	1043 aa	Predicted RBP	7.54	□□□□□ -1.2
NREP-222	ENST00000514515	RUFY3	Q7L099	469 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	CCDC186	Q7Z3E2	898 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	LUZP1	Q86V48	1076 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	TFIP11	Q9UBB9	837 aa	Known RBP	7.54	□□□□□ -1.2
NREP-222	ENST00000514515	ABCC3	O15438	1527 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	RGS12	O14924	1447 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	ZKSCAN1	P17029	563 aa	Predicted RBP	7.54	□□□□□ -1.2
NREP-222	ENST00000514515	MAP3K11	Q16584	847 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	TPD52L1	Q16890	204 aa	Predicted RBP	7.54	□□□□□ -1.2
NREP-222	ENST00000514515	NUP62CL	Q9H1M0	184 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	TNMD	Q9H2S6	317 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	CYP46A1	Q9Y6A2	500 aa		7.54	□□□□□ -1.2
NREP-222	ENST00000514515	ARHGAP31	Q2M1Z3	1444 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	KRT85	P78386	507 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	KIAA1524	Q8TCG1	905 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	BICD2	Q8TD16	824 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	TCEANC2	Q96MN5	208 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	ESF1	Q9H501	851 aa	Known RBP	7.53	□□□□□ -1.2
NREP-222	ENST00000514515	ARAP3	Q8WWN8	1544 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	SGSM2	O43147	1006 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	STK3	Q13188	491 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	C14orf37	Q86TY3	774 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	RHPN1	Q8TCX5	695 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	LARGE1	O95461	756 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	TNNT1	P13805	278 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	LRMP	Q12912	555 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	HDGFL1	Q5TGJ6	251 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	RUFY2	Q8WXA3	655 aa		7.53	□□□□□ -1.2
NREP-222	ENST00000514515	CAMSAP1	Q5T5Y3	1602 aa		7.52	□□□□□ -1.2
NREP-222	ENST00000514515	KIAA0232	Q92628	1395 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	LMTK2	Q8IWU2	1503 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	NPHP1	O15259	732 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	FBXW7	Q969H0	707 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	PTPRM	P28827	1452 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	AP5Z1	O43299	807 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	CEBPZ	Q03701	1054 aa	Known RBP	7.52	□□□□□ -1.21
NREP-222	ENST00000514515	ANO6	Q4KMQ2	910 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	NUTM2G	Q5VZR2	741 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	CCDC112	Q8NEF3	446 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	FAM200A	Q8TCP9	573 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	KIF1BP	Q96EK5	621 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	GTPBP4	Q9BZE4	634 aa	Known RBP	7.52	□□□□□ -1.21
NREP-222	ENST00000514515	KCNF1	Q9H3M0	494 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	SPTLC3	Q9NUV7	552 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	DACT1	Q9NYF0	836 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	RAD50	Q92878	1312 aa		7.52	□□□□□ -1.21
NREP-222	ENST00000514515	EDC4	Q6P2E9	1401 aa	Known RBP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	GOLGA6L19	H0YKK7	550 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	IFIT2	P09913	472 aa	Known RBP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	FGD1	P98174	961 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	TYRO3	Q06418	890 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	USP44	Q9H0E7	712 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	STAP2	Q9UGK3	403 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	MTMR6	Q9Y217	621 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	SOS1	Q07889	1333 aa	Predicted RBP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	FOSB	P53539	338 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	CLASRP	Q8N2M8	674 aa	Known RBP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	SPATA32	Q96LK8	384 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	PHAX	Q9H814	394 aa	Known RBP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	NRBP1	Q9UHY1	535 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	RERE	Q9P2R6	1566 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	ARHGEF40	Q8TER5	1519 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	RAB11FIP3	O75154	756 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	LIG1	P18858	919 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	GTF2F1	P35269	517 aa	Known RBP eCLIP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	ADCK5	Q3MIX3	580 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	UTP14C	Q5TAP6	766 aa	Known RBP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	TMEM87A	Q8NBN3	555 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	NGDN	Q8NEJ9	315 aa	Known RBP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	NAP1L2	Q9ULW6	460 aa	Predicted RBP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	RPAP1	Q9BWH6	1393 aa	Predicted RBP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	ZC3H13	Q5T200	1668 aa	Known RBP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	MAP3K19	Q56UN5	1328 aa		7.51	□□□□□ -1.21
NREP-222	ENST00000514515	CPSF1	Q10570	1443 aa	Known RBP	7.51	□□□□□ -1.21
NREP-222	ENST00000514515	ANXA1	P04083	346 aa		7.5	□□□□□ -1.21
NREP-222	ENST00000514515	TAF7	Q15545	349 aa	Predicted RBP	7.5	□□□□□ -1.21
NREP-222	ENST00000514515	GPATCH3	Q96I76	525 aa		7.5	□□□□□ -1.21
NREP-222	ENST00000514515	ZSCAN31	Q96LW9	406 aa	Predicted RBP	7.5	□□□□□ -1.21
NREP-222	ENST00000514515	LSG1	Q9H089	658 aa	Known RBP	7.5	□□□□□ -1.21
NREP-222	ENST00000514515	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
NREP-222	ENST00000514515		V9GYY5	206 aa	Predicted RBP	7.5	□□□□□ -1.21
NREP-222	ENST00000514515	NEXMIF	Q5QGS0	1516 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms