RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 HTATSF1O43719 755 aaKnown RBP25.05■■□□□ 1.6
LPCAT1-206ENST00000514484 FMNL2Q96PY5 1086 aa25.05■■□□□ 1.6
LPCAT1-206ENST00000514484 N4BP2Q86UW6 1770 aaPredicted RBP25.05■■□□□ 1.6
LPCAT1-206ENST00000514484 CANXP27824 592 aaKnown RBP25.04■■□□□ 1.6
LPCAT1-206ENST00000514484 GPR162Q16538 588 aa25.04■■□□□ 1.6
LPCAT1-206ENST00000514484 NLGN1Q8N2Q7 840 aa25.04■■□□□ 1.6
LPCAT1-206ENST00000514484 THUMPD2Q9BTF0 503 aaKnown RBP25.04■■□□□ 1.6
LPCAT1-206ENST00000514484 CD2APQ9Y5K6 639 aa25.04■■□□□ 1.6
LPCAT1-206ENST00000514484 KIAA1551Q9HCM1 1747 aa25.03■■□□□ 1.6
LPCAT1-206ENST00000514484 FKBP8Q14318 412 aa25.03■■□□□ 1.6
LPCAT1-206ENST00000514484 STARD3NLO95772 234 aa25.02■■□□□ 1.6
LPCAT1-206ENST00000514484 CCDC146Q8IYE0 955 aa25.02■■□□□ 1.6
LPCAT1-206ENST00000514484 PNNQ9H307 717 aaKnown RBP25.02■■□□□ 1.6
LPCAT1-206ENST00000514484 MIS18AQ9NYP9 233 aa25.02■■□□□ 1.6
LPCAT1-206ENST00000514484 LAMB4A4D0S4 1761 aa25.01■■□□□ 1.59
LPCAT1-206ENST00000514484 PRAMEF22A3QJZ6 481 aa25.01■■□□□ 1.59
LPCAT1-206ENST00000514484 YY1P25490 414 aa25.01■■□□□ 1.59
LPCAT1-206ENST00000514484 USPL1Q5W0Q7 1092 aa25.01■■□□□ 1.59
LPCAT1-206ENST00000514484 WWC3Q9ULE0 1092 aa25.01■■□□□ 1.59
LPCAT1-206ENST00000514484 SCN7AQ01118 1682 aa25.01■■□□□ 1.59
LPCAT1-206ENST00000514484 AFDNP55196 1824 aaKnown RBP25■■□□□ 1.59
LPCAT1-206ENST00000514484 WDR43Q15061 677 aaKnown RBP eCLIP25■■□□□ 1.59
LPCAT1-206ENST00000514484 ZPR1O75312 459 aa24.99■■□□□ 1.59
LPCAT1-206ENST00000514484 YBX3P16989 372 aaKnown RBP eCLIP24.99■■□□□ 1.59
LPCAT1-206ENST00000514484 TAF7Q15545 349 aaPredicted RBP24.99■■□□□ 1.59
LPCAT1-206ENST00000514484 C10orf71Q711Q0 1435 aa24.99■■□□□ 1.59
LPCAT1-206ENST00000514484 ZNF330Q9Y3S2 320 aaPredicted RBP24.99■■□□□ 1.59
LPCAT1-206ENST00000514484 ZNF316A6NFI3 1004 aaPredicted RBP24.98■■□□□ 1.59
LPCAT1-206ENST00000514484 TEX13AQ9BXU3 409 aaPredicted RBP24.98■■□□□ 1.59
LPCAT1-206ENST00000514484 PARP3Q9Y6F1 533 aa24.98■■□□□ 1.59
LPCAT1-206ENST00000514484 A1BGP04217 495 aa24.97■■□□□ 1.59
LPCAT1-206ENST00000514484 PIP4K2AP48426 406 aaPredicted RBP24.97■■□□□ 1.59
LPCAT1-206ENST00000514484 DDR1Q08345 913 aa24.97■■□□□ 1.59
LPCAT1-206ENST00000514484 RRP7AQ9Y3A4 280 aaKnown RBP24.97■■□□□ 1.59
LPCAT1-206ENST00000514484 BCORQ6W2J9 1755 aa24.96■■□□□ 1.59
LPCAT1-206ENST00000514484 NARFQ9UHQ1 456 aa24.96■■□□□ 1.59
LPCAT1-206ENST00000514484 USP16Q9Y5T5 823 aa24.96■■□□□ 1.59
LPCAT1-206ENST00000514484 PXDNLA1KZ92 1463 aa24.96■■□□□ 1.59
LPCAT1-206ENST00000514484 TMPOP42166 694 aaKnown RBP24.95■■□□□ 1.58
LPCAT1-206ENST00000514484 EIF5P55010 431 aaKnown RBP24.95■■□□□ 1.58
LPCAT1-206ENST00000514484 RIPK4P57078 832 aa24.95■■□□□ 1.58
LPCAT1-206ENST00000514484 BRCA1P38398 1863 aaKnown RBP24.94■■□□□ 1.58
LPCAT1-206ENST00000514484 BCL2L12Q9HB09 334 aa24.94■■□□□ 1.58
LPCAT1-206ENST00000514484 ADAMTS8Q9UP79 889 aa24.94■■□□□ 1.58
LPCAT1-206ENST00000514484 SNRPA1P09661 255 aaKnown RBP24.93■■□□□ 1.58
LPCAT1-206ENST00000514484 POLRMTO00411 1230 aaKnown RBP24.92■■□□□ 1.58
LPCAT1-206ENST00000514484 NEUROD2Q15784 382 aa24.92■■□□□ 1.58
LPCAT1-206ENST00000514484 NRXN2Q9P2S2 1712 aa24.92■■□□□ 1.58
LPCAT1-206ENST00000514484 IL6STP40189 918 aaPredicted RBP24.91■■□□□ 1.58
LPCAT1-206ENST00000514484 NFIXQ14938 502 aa24.91■■□□□ 1.58
LPCAT1-206ENST00000514484 RUNDC1Q96C34 613 aa24.91■■□□□ 1.58
LPCAT1-206ENST00000514484 TBC1D2BQ9UPU7 963 aa24.91■■□□□ 1.58
LPCAT1-206ENST00000514484 TM4SF1P30408 202 aa24.9■■□□□ 1.58
LPCAT1-206ENST00000514484 PNISRQ8TF01 805 aaKnown RBP24.9■■□□□ 1.58
LPCAT1-206ENST00000514484 A0A087WZG4 1122 aa24.89■■□□□ 1.58
LPCAT1-206ENST00000514484 A0A0G2JLW4 131 aa24.88■■□□□ 1.57
LPCAT1-206ENST00000514484 CCDC184Q52MB2 194 aa24.88■■□□□ 1.57
LPCAT1-206ENST00000514484 BICDL1Q6ZP65 573 aa24.88■■□□□ 1.57
LPCAT1-206ENST00000514484 EIF4A1P60842 406 aaKnown RBP24.87■■□□□ 1.57
LPCAT1-206ENST00000514484 LMOD3Q0VAK6 560 aa24.87■■□□□ 1.57
LPCAT1-206ENST00000514484 TSPYL4Q9UJ04 414 aa24.87■■□□□ 1.57
LPCAT1-206ENST00000514484 DPEP1P16444 411 aa24.86■■□□□ 1.57
LPCAT1-206ENST00000514484 NPM2Q86SE8 214 aaKnown RBP24.86■■□□□ 1.57
LPCAT1-206ENST00000514484 NBPF26B4DH59 902 aa24.85■■□□□ 1.57
LPCAT1-206ENST00000514484 GRIN3BO60391 1043 aa24.85■■□□□ 1.57
LPCAT1-206ENST00000514484 TGFB2P61812 414 aa24.85■■□□□ 1.57
LPCAT1-206ENST00000514484 TBC1D9BQ66K14 1250 aa24.85■■□□□ 1.57
LPCAT1-206ENST00000514484 NBPF10Q6P3W6 841 aaKnown RBP24.85■■□□□ 1.57
LPCAT1-206ENST00000514484 DZIP3Q86Y13 1208 aaKnown RBP24.85■■□□□ 1.57
LPCAT1-206ENST00000514484 NBPF15Q8N660 670 aa24.85■■□□□ 1.57
LPCAT1-206ENST00000514484 ANKRD31Q8N7Z5 1873 aa24.84■■□□□ 1.57
LPCAT1-206ENST00000514484 GIGYF1O75420 1035 aaPredicted RBP24.84■■□□□ 1.57
LPCAT1-206ENST00000514484 CAMTA2O94983 1202 aa24.84■■□□□ 1.57
LPCAT1-206ENST00000514484 TRIM35Q9UPQ4 493 aa24.84■■□□□ 1.57
LPCAT1-206ENST00000514484 ARFGEF1Q9Y6D6 1849 aa24.83■■□□□ 1.57
LPCAT1-206ENST00000514484 CARMIL3Q8ND23 1372 aa24.82■■□□□ 1.56
LPCAT1-206ENST00000514484 SERPINB2P05120 415 aa24.82■■□□□ 1.56
LPCAT1-206ENST00000514484 DLEC1Q9Y238 1755 aa24.82■■□□□ 1.56
LPCAT1-206ENST00000514484 CHRNA5P30532 468 aa24.81■■□□□ 1.56
LPCAT1-206ENST00000514484 BCS1LQ9Y276 419 aa24.8■■□□□ 1.56
LPCAT1-206ENST00000514484 KCNA3P22001 575 aa24.79■■□□□ 1.56
LPCAT1-206ENST00000514484 LAS1LQ9Y4W2 734 aaKnown RBP24.79■■□□□ 1.56
LPCAT1-206ENST00000514484 NUP98P52948 1817 aa24.79■■□□□ 1.56
LPCAT1-206ENST00000514484 COL11A2P13942 1736 aaPredicted RBP24.78■■□□□ 1.56
LPCAT1-206ENST00000514484 APAF1O14727 1248 aa24.78■■□□□ 1.56
LPCAT1-206ENST00000514484 ANP32CO43423 234 aa24.78■■□□□ 1.56
LPCAT1-206ENST00000514484 NGEFQ8N5V2 710 aa24.78■■□□□ 1.56
LPCAT1-206ENST00000514484 ZNF784Q8NCA9 323 aaPredicted RBP24.78■■□□□ 1.56
LPCAT1-206ENST00000514484 CCDC24Q8N4L8 307 aa24.77■■□□□ 1.56
LPCAT1-206ENST00000514484 SENP3-EIF4A1A0A087X0R7 540 aa24.76■■□□□ 1.55
LPCAT1-206ENST00000514484 MYL6BP14649 208 aa24.76■■□□□ 1.55
LPCAT1-206ENST00000514484 CACNA1SQ13698 1873 aa24.76■■□□□ 1.55
LPCAT1-206ENST00000514484 KRT24Q2M2I5 525 aa24.75■■□□□ 1.55
LPCAT1-206ENST00000514484 EIF2S2P20042 333 aaKnown RBP24.74■■□□□ 1.55
LPCAT1-206ENST00000514484 SETDB2Q96T68 719 aa24.74■■□□□ 1.55
LPCAT1-206ENST00000514484 MRS2Q9HD23 443 aa24.74■■□□□ 1.55
LPCAT1-206ENST00000514484 BABAM1Q9NWV8 329 aa24.74■■□□□ 1.55
LPCAT1-206ENST00000514484 CHL1O00533 1208 aa24.73■■□□□ 1.55
LPCAT1-206ENST00000514484 PRR5LQ6MZQ0 368 aa24.73■■□□□ 1.55
LPCAT1-206ENST00000514484 PIM2Q9P1W9 311 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms