RNA–Protein interactions for RNA: ENST00000514478.1

COPG1-209, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-209ENST00000514478 THRAP3Q9Y2W1 955 aaKnown RBP11.32□□□□□ -0.6
COPG1-209ENST00000514478 NUP188Q5SRE5 1749 aa11.32□□□□□ -0.6
COPG1-209ENST00000514478 TRIM37O94972 964 aa11.31□□□□□ -0.6
COPG1-209ENST00000514478 TRIM27P14373 513 aa11.31□□□□□ -0.6
COPG1-209ENST00000514478 EIF2S2P20042 333 aaKnown RBP11.31□□□□□ -0.6
COPG1-209ENST00000514478 BRPF1P55201 1214 aaPredicted RBP11.31□□□□□ -0.6
COPG1-209ENST00000514478 HDGFL1Q5TGJ6 251 aa11.31□□□□□ -0.6
COPG1-209ENST00000514478 ITPRIPQ8IWB1 547 aa11.31□□□□□ -0.6
COPG1-209ENST00000514478 API5Q9BZZ5 524 aaKnown RBP11.31□□□□□ -0.6
COPG1-209ENST00000514478 TNS2Q63HR2 1409 aa11.31□□□□□ -0.6
COPG1-209ENST00000514478 ERVV-2B6SEH9 535 aa11.3□□□□□ -0.6
COPG1-209ENST00000514478 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
COPG1-209ENST00000514478 SLC39A6Q13433 755 aa11.3□□□□□ -0.6
COPG1-209ENST00000514478 MVPQ14764 893 aaKnown RBP11.3□□□□□ -0.6
COPG1-209ENST00000514478 EZH2Q15910 746 aaKnown RBP11.3□□□□□ -0.6
COPG1-209ENST00000514478 ARHGAP45Q92619 1136 aa11.3□□□□□ -0.6
COPG1-209ENST00000514478 HOXB7P09629 217 aa11.29□□□□□ -0.6
COPG1-209ENST00000514478 RLBP1P12271 317 aa11.29□□□□□ -0.6
COPG1-209ENST00000514478 NKX1-1Q15270 411 aaPredicted RBP11.29□□□□□ -0.6
COPG1-209ENST00000514478 DDB1Q16531 1140 aa11.29□□□□□ -0.6
COPG1-209ENST00000514478 ZNF790Q6PG37 636 aa11.29□□□□□ -0.6
COPG1-209ENST00000514478 TMEM57Q8N5G2 664 aa11.29□□□□□ -0.6
COPG1-209ENST00000514478 PTPRCP08575 1304 aa11.29□□□□□ -0.6
COPG1-209ENST00000514478 AFDNP55196 1824 aaKnown RBP11.28□□□□□ -0.6
COPG1-209ENST00000514478 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
COPG1-209ENST00000514478 FMNL2Q96PY5 1086 aa11.28□□□□□ -0.6
COPG1-209ENST00000514478 TMOD3Q9NYL9 352 aa11.28□□□□□ -0.6
COPG1-209ENST00000514478 DDX19BQ9UMR2 479 aa11.28□□□□□ -0.6
COPG1-209ENST00000514478 KCNQ2O43526 872 aa11.27□□□□□ -0.61
COPG1-209ENST00000514478 AAMPQ13685 434 aa11.27□□□□□ -0.61
COPG1-209ENST00000514478 CAMKK2Q96RR4 588 aa11.27□□□□□ -0.61
COPG1-209ENST00000514478 CHMP4BQ9H444 224 aaKnown RBP11.27□□□□□ -0.61
COPG1-209ENST00000514478 SBF2Q86WG5 1849 aa11.26□□□□□ -0.61
COPG1-209ENST00000514478 GIGYF1O75420 1035 aaPredicted RBP11.26□□□□□ -0.61
COPG1-209ENST00000514478 FKBP5Q13451 457 aaPredicted RBP11.26□□□□□ -0.61
COPG1-209ENST00000514478 FAM182BQ5T319 152 aa11.26□□□□□ -0.61
COPG1-209ENST00000514478 G2E3Q7L622 706 aa11.26□□□□□ -0.61
COPG1-209ENST00000514478 SYTL4Q96C24 671 aaPredicted RBP11.26□□□□□ -0.61
COPG1-209ENST00000514478 FLIIQ13045 1269 aa11.25□□□□□ -0.61
COPG1-209ENST00000514478 SLC4A10Q6U841 1118 aa11.25□□□□□ -0.61
COPG1-209ENST00000514478 CHPF2Q9P2E5 772 aa11.25□□□□□ -0.61
COPG1-209ENST00000514478 ABCC4O15439 1325 aa11.25□□□□□ -0.61
COPG1-209ENST00000514478 PRAMEF22A3QJZ6 481 aa11.24□□□□□ -0.61
COPG1-209ENST00000514478 SNRPA1P09661 255 aaKnown RBP11.24□□□□□ -0.61
COPG1-209ENST00000514478 ZNF496Q96IT1 587 aaPredicted RBP11.24□□□□□ -0.61
COPG1-209ENST00000514478 DBF4Q9UBU7 674 aaPredicted RBP11.24□□□□□ -0.61
COPG1-209ENST00000514478 KCPQ6ZWJ8 1503 aa11.24□□□□□ -0.61
COPG1-209ENST00000514478 ARFGEF2Q9Y6D5 1785 aa11.23□□□□□ -0.61
COPG1-209ENST00000514478 HEG1Q9ULI3 1381 aa11.23□□□□□ -0.61
COPG1-209ENST00000514478 F6X3S4 739 aa11.22□□□□□ -0.61
COPG1-209ENST00000514478 PTCD1O75127 700 aaKnown RBP11.22□□□□□ -0.61
COPG1-209ENST00000514478 ANXA1P04083 346 aa11.22□□□□□ -0.61
COPG1-209ENST00000514478 ACSBG1Q96GR2 724 aa11.22□□□□□ -0.61
COPG1-209ENST00000514478 RBM42Q9BTD8 480 aaKnown RBP11.22□□□□□ -0.61
COPG1-209ENST00000514478 PHAXQ9H814 394 aaKnown RBP11.22□□□□□ -0.61
COPG1-209ENST00000514478 HYPKQ9NX55 129 aa11.22□□□□□ -0.61
COPG1-209ENST00000514478 BTAF1O14981 1849 aa11.21□□□□□ -0.61
COPG1-209ENST00000514478 TJP1Q07157 1748 aa11.21□□□□□ -0.61
COPG1-209ENST00000514478 PXDNLA1KZ92 1463 aa11.21□□□□□ -0.61
COPG1-209ENST00000514478 PLSCR1O15162 318 aa11.21□□□□□ -0.61
COPG1-209ENST00000514478 MYL6BP14649 208 aa11.21□□□□□ -0.61
COPG1-209ENST00000514478 CCT4P50991 539 aaKnown RBP11.21□□□□□ -0.61
COPG1-209ENST00000514478 INTS3Q68E01 1043 aaKnown RBP11.21□□□□□ -0.61
COPG1-209ENST00000514478 CENPQQ7L2Z9 268 aaPredicted RBP11.21□□□□□ -0.61
COPG1-209ENST00000514478 MARCH10Q8NA82 808 aaPredicted RBP11.21□□□□□ -0.61
COPG1-209ENST00000514478 PIGBQ92521 554 aa11.21□□□□□ -0.61
COPG1-209ENST00000514478 RWDD1Q9H446 243 aaPredicted RBP11.21□□□□□ -0.61
COPG1-209ENST00000514478 NHSQ6T4R5 1651 aa11.2□□□□□ -0.62
COPG1-209ENST00000514478 BCL9O00512 1426 aa11.2□□□□□ -0.62
COPG1-209ENST00000514478 DDX58O95786 925 aaKnown RBP11.2□□□□□ -0.62
COPG1-209ENST00000514478 PRIM1P49642 420 aaKnown RBP11.2□□□□□ -0.62
COPG1-209ENST00000514478 AIMP1Q12904 312 aaKnown RBP11.2□□□□□ -0.62
COPG1-209ENST00000514478 BCL11BQ9C0K0 894 aaPredicted RBP11.2□□□□□ -0.62
COPG1-209ENST00000514478 DDX21Q9NR30 783 aaKnown RBP eCLIP11.2□□□□□ -0.62
COPG1-209ENST00000514478 ASAP1Q9ULH1 1129 aa11.2□□□□□ -0.62
COPG1-209ENST00000514478 USP16Q9Y5T5 823 aa11.2□□□□□ -0.62
COPG1-209ENST00000514478 PROSER3Q2NL68 480 aa11.19□□□□□ -0.62
COPG1-209ENST00000514478 ATG3Q9NT62 314 aa11.19□□□□□ -0.62
COPG1-209ENST00000514478 STK32BQ9NY57 414 aa11.19□□□□□ -0.62
COPG1-209ENST00000514478 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
COPG1-209ENST00000514478 ZBTB7BO15156 539 aaPredicted RBP11.18□□□□□ -0.62
COPG1-209ENST00000514478 RIC3Q7Z5B4 369 aa11.18□□□□□ -0.62
COPG1-209ENST00000514478 DNAAF4Q8WXU2 420 aa11.18□□□□□ -0.62
COPG1-209ENST00000514478 TEX13AQ9BXU3 409 aaPredicted RBP11.18□□□□□ -0.62
COPG1-209ENST00000514478 C1orf115Q9H7X2 142 aa11.18□□□□□ -0.62
COPG1-209ENST00000514478 ZBTB40Q9NUA8 1239 aa11.18□□□□□ -0.62
COPG1-209ENST00000514478 ERBB4Q15303 1308 aa11.17□□□□□ -0.62
COPG1-209ENST00000514478 KDM2BQ8NHM5 1336 aa11.17□□□□□ -0.62
COPG1-209ENST00000514478 PI4KAP2A4QPH2 592 aa11.17□□□□□ -0.62
COPG1-209ENST00000514478 IGHDP01880 384 aa11.17□□□□□ -0.62
COPG1-209ENST00000514478 PIP4K2AP48426 406 aaPredicted RBP11.17□□□□□ -0.62
COPG1-209ENST00000514478 PI4KAP1Q8N8J0 262 aa11.17□□□□□ -0.62
COPG1-209ENST00000514478 XAGE3Q8WTP9 111 aa11.17□□□□□ -0.62
COPG1-209ENST00000514478 SRCIN1Q9C0H9 1055 aa11.17□□□□□ -0.62
COPG1-209ENST00000514478 MAP3K2Q9Y2U5 619 aa11.17□□□□□ -0.62
COPG1-209ENST00000514478 ANKRD36CQ5JPF3 1778 aa11.17□□□□□ -0.62
COPG1-209ENST00000514478 NUP98P52948 1817 aa11.16□□□□□ -0.62
COPG1-209ENST00000514478 CASZ1Q86V15 1759 aa11.16□□□□□ -0.62
COPG1-209ENST00000514478 COL5A3P25940 1745 aaPredicted RBP11.16□□□□□ -0.62
COPG1-209ENST00000514478 HMGB2P26583 209 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms