RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 NUB1Q9Y5A7 615 aa10.47□□□□□ -0.73
GPBP1-208ENST00000514387 MRVI1Q9Y6F6 885 aa10.47□□□□□ -0.73
GPBP1-208ENST00000514387 RPAP1Q9BWH6 1393 aaPredicted RBP10.47□□□□□ -0.73
GPBP1-208ENST00000514387 ZC3H13Q5T200 1668 aaKnown RBP10.47□□□□□ -0.73
GPBP1-208ENST00000514387 CDC25BP30305 580 aa10.46□□□□□ -0.73
GPBP1-208ENST00000514387 MTHFSP49914 203 aa10.46□□□□□ -0.73
GPBP1-208ENST00000514387 GTF2A1P52655 376 aaPredicted RBP10.46□□□□□ -0.73
GPBP1-208ENST00000514387 RGS12O14924 1447 aa10.46□□□□□ -0.73
GPBP1-208ENST00000514387 FAM135BQ49AJ0 1406 aa10.46□□□□□ -0.73
GPBP1-208ENST00000514387 NRXN1Q9ULB1 1477 aa10.46□□□□□ -0.73
GPBP1-208ENST00000514387 CTAGE5O15320 804 aa10.46□□□□□ -0.73
GPBP1-208ENST00000514387 TNNT1P13805 278 aa10.46□□□□□ -0.73
GPBP1-208ENST00000514387 TRIM35Q9UPQ4 493 aa10.46□□□□□ -0.73
GPBP1-208ENST00000514387 ABCA9Q8IUA7 1624 aa10.46□□□□□ -0.74
GPBP1-208ENST00000514387 CCDC192P0DO97 292 aa10.46□□□□□ -0.74
GPBP1-208ENST00000514387 OSBPL3Q9H4L5 887 aa10.46□□□□□ -0.74
GPBP1-208ENST00000514387 RPS6KL1Q9Y6S9 549 aa10.46□□□□□ -0.74
GPBP1-208ENST00000514387 CD109Q6YHK3 1445 aa10.45□□□□□ -0.74
GPBP1-208ENST00000514387 DHX8Q14562 1220 aaKnown RBP10.45□□□□□ -0.74
GPBP1-208ENST00000514387 RPAP2Q8IXW5 612 aaPredicted RBP10.45□□□□□ -0.74
GPBP1-208ENST00000514387 NOL10Q9BSC4 688 aaKnown RBP10.45□□□□□ -0.74
GPBP1-208ENST00000514387 V9GYY5 206 aaPredicted RBP10.45□□□□□ -0.74
GPBP1-208ENST00000514387 U2AF1L5P0DN76 240 aaPredicted RBP10.45□□□□□ -0.74
GPBP1-208ENST00000514387 U2AF1Q01081 240 aaKnown RBP eCLIP10.45□□□□□ -0.74
GPBP1-208ENST00000514387 MSL3Q8N5Y2 521 aaKnown RBP10.45□□□□□ -0.74
GPBP1-208ENST00000514387 NECTIN2Q92692 538 aa10.45□□□□□ -0.74
GPBP1-208ENST00000514387 TET3O43151 1660 aa10.45□□□□□ -0.74
GPBP1-208ENST00000514387 CDC42BPGQ6DT37 1551 aa10.45□□□□□ -0.74
GPBP1-208ENST00000514387 HCLS1P14317 486 aaPredicted RBP10.45□□□□□ -0.74
GPBP1-208ENST00000514387 TPM4P67936 248 aa10.45□□□□□ -0.74
GPBP1-208ENST00000514387 FAM200AQ8TCP9 573 aa10.45□□□□□ -0.74
GPBP1-208ENST00000514387 TSR2Q969E8 191 aaKnown RBP10.45□□□□□ -0.74
GPBP1-208ENST00000514387 CWC15Q9P013 229 aaKnown RBP10.45□□□□□ -0.74
GPBP1-208ENST00000514387 C17orf53Q8N3J3 647 aaPredicted RBP10.44□□□□□ -0.74
GPBP1-208ENST00000514387 MRPL50Q8N5N7 158 aaKnown RBP10.44□□□□□ -0.74
GPBP1-208ENST00000514387 FAM177BA6PVY3 158 aa10.44□□□□□ -0.74
GPBP1-208ENST00000514387 CALRP27797 417 aaKnown RBP10.44□□□□□ -0.74
GPBP1-208ENST00000514387 CD151P48509 253 aa10.44□□□□□ -0.74
GPBP1-208ENST00000514387 ZNF513Q8N8E2 541 aaPredicted RBP10.44□□□□□ -0.74
GPBP1-208ENST00000514387 IFT172Q9UG01 1749 aa10.44□□□□□ -0.74
GPBP1-208ENST00000514387 SYCP2Q9BX26 1530 aa10.44□□□□□ -0.74
GPBP1-208ENST00000514387 ELP1O95163 1332 aa10.44□□□□□ -0.74
GPBP1-208ENST00000514387 COL3A1P02461 1466 aaPredicted RBP10.43□□□□□ -0.74
GPBP1-208ENST00000514387 GPS2Q13227 327 aa10.43□□□□□ -0.74
GPBP1-208ENST00000514387 SIRT2Q8IXJ6 389 aa10.43□□□□□ -0.74
GPBP1-208ENST00000514387 RASSF4Q9H2L5 321 aa10.43□□□□□ -0.74
GPBP1-208ENST00000514387 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.43□□□□□ -0.74
GPBP1-208ENST00000514387 NEK4P51957 841 aa10.43□□□□□ -0.74
GPBP1-208ENST00000514387 RBM6P78332 1123 aaKnown RBP10.43□□□□□ -0.74
GPBP1-208ENST00000514387 CEP135Q66GS9 1140 aa10.43□□□□□ -0.74
GPBP1-208ENST00000514387 TBC1D22AQ8WUA7 517 aa10.43□□□□□ -0.74
GPBP1-208ENST00000514387 ZBTB9Q96C00 473 aa10.43□□□□□ -0.74
GPBP1-208ENST00000514387 SDSP20132 328 aa10.42□□□□□ -0.74
GPBP1-208ENST00000514387 DEPDC5O75140 1603 aa10.42□□□□□ -0.74
GPBP1-208ENST00000514387 GADD45BO75293 160 aaPredicted RBP10.42□□□□□ -0.74
GPBP1-208ENST00000514387 TNNT3P45378 269 aaPredicted RBP10.42□□□□□ -0.74
GPBP1-208ENST00000514387 KMT5BQ4FZB7 885 aa10.42□□□□□ -0.74
GPBP1-208ENST00000514387 ANKRD44Q8N8A2 993 aa10.42□□□□□ -0.74
GPBP1-208ENST00000514387 TEX13AQ9BXU3 409 aaPredicted RBP10.42□□□□□ -0.74
GPBP1-208ENST00000514387 DDX46Q7L014 1031 aaKnown RBP10.41□□□□□ -0.74
GPBP1-208ENST00000514387 SLU7O95391 586 aaKnown RBP10.41□□□□□ -0.74
GPBP1-208ENST00000514387 TPM1P09493 284 aa10.41□□□□□ -0.74
GPBP1-208ENST00000514387 ZSCAN22P10073 491 aaPredicted RBP10.41□□□□□ -0.74
GPBP1-208ENST00000514387 HNRNPH2P55795 449 aaKnown RBP10.41□□□□□ -0.74
GPBP1-208ENST00000514387 GOLGA6L1Q8N7Z2 621 aa10.41□□□□□ -0.74
GPBP1-208ENST00000514387 IFT57Q9NWB7 429 aa10.41□□□□□ -0.74
GPBP1-208ENST00000514387 ZBTB7CA1YPR0 619 aa10.41□□□□□ -0.74
GPBP1-208ENST00000514387 H2AFXP16104 143 aaPredicted RBP10.41□□□□□ -0.74
GPBP1-208ENST00000514387 TPD52L1Q16890 204 aaPredicted RBP10.41□□□□□ -0.74
GPBP1-208ENST00000514387 SPTY2D1Q68D10 685 aaPredicted RBP10.41□□□□□ -0.74
GPBP1-208ENST00000514387 PLA2G4DQ86XP0 818 aa10.41□□□□□ -0.74
GPBP1-208ENST00000514387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.41□□□□□ -0.741e-7■□□□□ 10.9
GPBP1-208ENST00000514387 CCDC196A0A1B0GTZ2 297 aa10.4□□□□□ -0.74
GPBP1-208ENST00000514387 INHBEP58166 350 aa10.4□□□□□ -0.74
GPBP1-208ENST00000514387 PSD3Q9NYI0 1048 aa10.4□□□□□ -0.74
GPBP1-208ENST00000514387 ANKRD26Q9UPS8 1709 aa10.4□□□□□ -0.74
GPBP1-208ENST00000514387 TSGA10IPQ3SY00 556 aa10.4□□□□□ -0.74
GPBP1-208ENST00000514387 ZSCAN25Q6NSZ9 544 aa10.4□□□□□ -0.74
GPBP1-208ENST00000514387 TDRD7Q8NHU6 1098 aaKnown RBP10.4□□□□□ -0.74
GPBP1-208ENST00000514387 ARGLU1Q9NWB6 273 aaPredicted RBP10.4□□□□□ -0.74
GPBP1-208ENST00000514387 FANCAO15360 1455 aa10.4□□□□□ -0.74
GPBP1-208ENST00000514387 LIG1P18858 919 aa10.4□□□□□ -0.75
GPBP1-208ENST00000514387 TDO2P48775 406 aa10.4□□□□□ -0.75
GPBP1-208ENST00000514387 RAD51AP2Q09MP3 1159 aa10.4□□□□□ -0.75
GPBP1-208ENST00000514387 IQUBQ8NA54 791 aa10.4□□□□□ -0.75
GPBP1-208ENST00000514387 CALR3Q96L12 384 aaKnown RBP10.4□□□□□ -0.75
GPBP1-208ENST00000514387 SMC3Q9UQE7 1217 aa10.4□□□□□ -0.75
GPBP1-208ENST00000514387 VWDEQ8N2E2 1590 aa10.39□□□□□ -0.75
GPBP1-208ENST00000514387 PTGS1P23219 599 aa10.39□□□□□ -0.75
GPBP1-208ENST00000514387 NOM1Q5C9Z4 860 aaKnown RBP10.39□□□□□ -0.75
GPBP1-208ENST00000514387 NYAP1Q6ZVC0 841 aa10.39□□□□□ -0.75
GPBP1-208ENST00000514387 SUFUQ9UMX1 484 aa10.39□□□□□ -0.75
GPBP1-208ENST00000514387 QRICH2Q9H0J4 1663 aa10.39□□□□□ -0.75
GPBP1-208ENST00000514387 VAMP4O75379 141 aa10.39□□□□□ -0.75
GPBP1-208ENST00000514387 ZNF75DP51815 510 aa10.39□□□□□ -0.75
GPBP1-208ENST00000514387 GNAI1P63096 354 aa10.39□□□□□ -0.75
GPBP1-208ENST00000514387 SRCIN1Q9C0H9 1055 aa10.39□□□□□ -0.75
GPBP1-208ENST00000514387 CXorf56Q9H5V9 222 aa10.39□□□□□ -0.75
GPBP1-208ENST00000514387 KCNJ6P48051 423 aa10.38□□□□□ -0.75
GPBP1-208ENST00000514387 PTPN14Q15678 1187 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms