RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 USP42Q9H9J4 1324 aaKnown RBP16.94■□□□□ 0.3
SFXN1-210ENST00000513725 LTBP1Q14766 1721 aa16.93■□□□□ 0.3
SFXN1-210ENST00000513725 KDRP35968 1356 aa16.93■□□□□ 0.3
SFXN1-210ENST00000513725 CYP4F22Q6NT55 531 aa16.93■□□□□ 0.3
SFXN1-210ENST00000513725 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
SFXN1-210ENST00000513725 TM4SF1P30408 202 aa16.92■□□□□ 0.3
SFXN1-210ENST00000513725 NBPF15Q8N660 670 aa16.92■□□□□ 0.3
SFXN1-210ENST00000513725 TMC1Q8TDI8 760 aa16.92■□□□□ 0.3
SFXN1-210ENST00000513725 COG3Q96JB2 828 aa16.92■□□□□ 0.3
SFXN1-210ENST00000513725 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
SFXN1-210ENST00000513725 H0YIN7 160 aa16.91■□□□□ 0.3
SFXN1-210ENST00000513725 MAP1SQ66K74 1059 aaPredicted RBP16.91■□□□□ 0.3
SFXN1-210ENST00000513725 PNMA8AQ86V59 439 aaPredicted RBP16.91■□□□□ 0.3
SFXN1-210ENST00000513725 C2CD5Q86YS7 1000 aa16.91■□□□□ 0.3
SFXN1-210ENST00000513725 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
SFXN1-210ENST00000513725 HABP4Q5JVS0 413 aaKnown RBP16.9■□□□□ 0.3
SFXN1-210ENST00000513725 SLC4A9Q96Q91 983 aa16.9■□□□□ 0.3
SFXN1-210ENST00000513725 DDX21Q9NR30 783 aaKnown RBP eCLIP16.9■□□□□ 0.3
SFXN1-210ENST00000513725 HACL1Q9UJ83 578 aa16.9■□□□□ 0.3
SFXN1-210ENST00000513725 SPG7Q9UQ90 795 aa16.9■□□□□ 0.3
SFXN1-210ENST00000513725 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
SFXN1-210ENST00000513725 FBLN1P23142 703 aa16.89■□□□□ 0.29
SFXN1-210ENST00000513725 TAOK3Q9H2K8 898 aa16.89■□□□□ 0.29
SFXN1-210ENST00000513725 TERF2IPQ9NYB0 399 aa16.89■□□□□ 0.29
SFXN1-210ENST00000513725 LTBP3Q9NS15 1303 aa16.89■□□□□ 0.29
SFXN1-210ENST00000513725 EPHX2P34913 555 aa16.88■□□□□ 0.29
SFXN1-210ENST00000513725 ADAMTSL1Q8N6G6 1762 aa16.87■□□□□ 0.29
SFXN1-210ENST00000513725 FER1L6Q2WGJ9 1857 aa16.87■□□□□ 0.29
SFXN1-210ENST00000513725 C21orf2O43822 256 aa16.87■□□□□ 0.29
SFXN1-210ENST00000513725 AOC2O75106 756 aa16.87■□□□□ 0.29
SFXN1-210ENST00000513725 ZPR1O75312 459 aa16.86■□□□□ 0.29
SFXN1-210ENST00000513725 MYH14Q7Z406 1995 aaKnown RBP16.86■□□□□ 0.29
SFXN1-210ENST00000513725 DLL1O00548 723 aa16.85■□□□□ 0.29
SFXN1-210ENST00000513725 BRPF1P55201 1214 aaPredicted RBP16.85■□□□□ 0.29
SFXN1-210ENST00000513725 RRS1Q15050 365 aaKnown RBP16.85■□□□□ 0.29
SFXN1-210ENST00000513725 SLC12A5Q9H2X9 1139 aa16.85■□□□□ 0.29
SFXN1-210ENST00000513725 A0A1W2PP64 1363 aa16.84■□□□□ 0.29
SFXN1-210ENST00000513725 AFDNP55196 1824 aaKnown RBP16.84■□□□□ 0.29
SFXN1-210ENST00000513725 CRKLP46109 303 aaKnown RBP16.83■□□□□ 0.28
SFXN1-210ENST00000513725 ZNF622Q969S3 477 aaKnown RBP eCLIP16.83■□□□□ 0.281e-6■□□□□ 10
SFXN1-210ENST00000513725 TLL2Q9Y6L7 1015 aa16.83■□□□□ 0.28
SFXN1-210ENST00000513725 INSRP06213 1382 aa16.82■□□□□ 0.28
SFXN1-210ENST00000513725 USPL1Q5W0Q7 1092 aa16.82■□□□□ 0.28
SFXN1-210ENST00000513725 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
SFXN1-210ENST00000513725 SERPINB2P05120 415 aa16.81■□□□□ 0.28
SFXN1-210ENST00000513725 NFIXQ14938 502 aa16.81■□□□□ 0.28
SFXN1-210ENST00000513725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.81■□□□□ 0.28
SFXN1-210ENST00000513725 PDZRN3Q9UPQ7 1066 aa16.81■□□□□ 0.28
SFXN1-210ENST00000513725 NRXN2Q9P2S2 1712 aa16.81■□□□□ 0.28
SFXN1-210ENST00000513725 RAB3GAP2Q9H2M9 1393 aa16.8■□□□□ 0.28
SFXN1-210ENST00000513725 PHKG2P15735 406 aa16.8■□□□□ 0.28
SFXN1-210ENST00000513725 HSP90AB2PQ58FF8 381 aa16.8■□□□□ 0.28
SFXN1-210ENST00000513725 SOGA3Q5TF21 947 aa16.79■□□□□ 0.28
SFXN1-210ENST00000513725 RNF123Q5XPI4 1314 aa16.78■□□□□ 0.28
SFXN1-210ENST00000513725 CST9Q5W186 159 aa16.78■□□□□ 0.28
SFXN1-210ENST00000513725 CIAPIN1Q6FI81 312 aa16.78■□□□□ 0.28
SFXN1-210ENST00000513725 ERVV-2B6SEH9 535 aa16.77■□□□□ 0.28
SFXN1-210ENST00000513725 FXR1P51114 621 aaKnown RBP eCLIP16.77■□□□□ 0.28
SFXN1-210ENST00000513725 FLT4P35916 1363 aa16.77■□□□□ 0.27
SFXN1-210ENST00000513725 ZNF541Q9H0D2 1346 aa16.76■□□□□ 0.27
SFXN1-210ENST00000513725 TRPM7Q96QT4 1865 aa16.76■□□□□ 0.27
SFXN1-210ENST00000513725 PDE6BP35913 854 aa16.76■□□□□ 0.27
SFXN1-210ENST00000513725 FMR1Q06787 632 aaKnown RBP eCLIP16.76■□□□□ 0.27
SFXN1-210ENST00000513725 CARMIL3Q8ND23 1372 aa16.76■□□□□ 0.27
SFXN1-210ENST00000513725 SAPCD2Q86UD0 394 aa16.75■□□□□ 0.27
SFXN1-210ENST00000513725 HHIPL1Q96JK4 782 aa16.75■□□□□ 0.27
SFXN1-210ENST00000513725 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
SFXN1-210ENST00000513725 CNKSR1Q969H4 720 aa16.74■□□□□ 0.27
SFXN1-210ENST00000513725 ADAMTS7Q9UKP4 1686 aa16.74■□□□□ 0.27
SFXN1-210ENST00000513725 KIF24Q5T7B8 1368 aa16.74■□□□□ 0.27
SFXN1-210ENST00000513725 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
SFXN1-210ENST00000513725 BICDL1Q6ZP65 573 aa16.73■□□□□ 0.27
SFXN1-210ENST00000513725 NARFQ9UHQ1 456 aa16.73■□□□□ 0.27
SFXN1-210ENST00000513725 ROCK2O75116 1388 aaKnown RBP16.73■□□□□ 0.27
SFXN1-210ENST00000513725 GPC2Q8N158 579 aa16.72■□□□□ 0.27
SFXN1-210ENST00000513725 BRIP1Q9BX63 1249 aa16.72■□□□□ 0.27
SFXN1-210ENST00000513725 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
SFXN1-210ENST00000513725 NCAPD2Q15021 1401 aa16.71■□□□□ 0.27
SFXN1-210ENST00000513725 TRAF5O00463 557 aa16.71■□□□□ 0.27
SFXN1-210ENST00000513725 LMOD1P29536 600 aaPredicted RBP16.71■□□□□ 0.27
SFXN1-210ENST00000513725 CABP4P57796 275 aa16.71■□□□□ 0.27
SFXN1-210ENST00000513725 NOGQ13253 232 aa16.71■□□□□ 0.27
SFXN1-210ENST00000513725 CTU1Q7Z7A3 348 aaKnown RBP16.71■□□□□ 0.27
SFXN1-210ENST00000513725 HSP90AB1P08238 724 aaKnown RBP16.7■□□□□ 0.26
SFXN1-210ENST00000513725 PRPF40BQ6NWY9 871 aaKnown RBP16.7■□□□□ 0.26
SFXN1-210ENST00000513725 SLC17A8Q8NDX2 589 aa16.7■□□□□ 0.26
SFXN1-210ENST00000513725 SAGE1Q9NXZ1 904 aa16.7■□□□□ 0.26
SFXN1-210ENST00000513725 HPS5Q9UPZ3 1129 aa16.7■□□□□ 0.26
SFXN1-210ENST00000513725 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
SFXN1-210ENST00000513725 CELF2O95319 508 aaKnown RBP16.68■□□□□ 0.26
SFXN1-210ENST00000513725 CCDC93Q567U6 631 aa16.68■□□□□ 0.26
SFXN1-210ENST00000513725 AKAP4Q5JQC9 854 aa16.68■□□□□ 0.26
SFXN1-210ENST00000513725 STYK1Q6J9G0 422 aa16.68■□□□□ 0.26
SFXN1-210ENST00000513725 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
SFXN1-210ENST00000513725 ANKRD31Q8N7Z5 1873 aa16.67■□□□□ 0.26
SFXN1-210ENST00000513725 FZD9O00144 591 aa16.67■□□□□ 0.26
SFXN1-210ENST00000513725 FKBP4Q02790 459 aaKnown RBP eCLIP16.67■□□□□ 0.26
SFXN1-210ENST00000513725 PUS7Q96PZ0 661 aaKnown RBP16.67■□□□□ 0.26
SFXN1-210ENST00000513725 BCL2L12Q9HB09 334 aa16.67■□□□□ 0.26
SFXN1-210ENST00000513725 ZNF277Q9NRM2 450 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms