RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 HIRIP3Q9BW71 556 aaPredicted RBP8.57□□□□□ -1.04
GYPB-215ENST00000513677 BTG4Q9NY30 223 aa8.57□□□□□ -1.04
GYPB-215ENST00000513677 SLC27A5Q9Y2P5 690 aa8.57□□□□□ -1.04
GYPB-215ENST00000513677 ARHGEF10O15013 1369 aa8.57□□□□□ -1.04
GYPB-215ENST00000513677 LRP5O75197 1615 aa8.57□□□□□ -1.04
GYPB-215ENST00000513677 DHX57Q6P158 1386 aaKnown RBP8.57□□□□□ -1.04
GYPB-215ENST00000513677 PIK3C2GO75747 1445 aa8.56□□□□□ -1.04
GYPB-215ENST00000513677 SPATA31E1Q6ZUB1 1445 aa8.56□□□□□ -1.04
GYPB-215ENST00000513677 HRCP23327 699 aa8.56□□□□□ -1.04
GYPB-215ENST00000513677 NRXN1Q9ULB1 1477 aa8.56□□□□□ -1.04
GYPB-215ENST00000513677 RGPD1P0DJD0 1748 aa8.55□□□□□ -1.04
GYPB-215ENST00000513677 NRAPQ86VF7 1730 aa8.55□□□□□ -1.04
GYPB-215ENST00000513677 MOXD2PA6NHM9 499 aa8.55□□□□□ -1.04
GYPB-215ENST00000513677 NDUFV2P19404 249 aa8.55□□□□□ -1.04
GYPB-215ENST00000513677 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
GYPB-215ENST00000513677 NKX2-3Q8TAU0 364 aa8.55□□□□□ -1.04
GYPB-215ENST00000513677 DDRGK1Q96HY6 314 aa8.55□□□□□ -1.04
GYPB-215ENST00000513677 SBNO1A3KN83 1393 aa8.55□□□□□ -1.04
GYPB-215ENST00000513677 COL14A1Q05707 1796 aaKnown RBP8.54□□□□□ -1.04
GYPB-215ENST00000513677 GPRASP1Q5JY77 1395 aa8.54□□□□□ -1.04
GYPB-215ENST00000513677 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
GYPB-215ENST00000513677 C14orf93Q9H972 538 aaKnown RBP8.54□□□□□ -1.04
GYPB-215ENST00000513677 STRN4Q9NRL3 753 aa8.54□□□□□ -1.04
GYPB-215ENST00000513677 TRAK1Q9UPV9 953 aa8.54□□□□□ -1.04
GYPB-215ENST00000513677 PLEKHG3A1L390 1219 aa8.53□□□□□ -1.04
GYPB-215ENST00000513677 FDX1P10109 184 aa8.53□□□□□ -1.04
GYPB-215ENST00000513677 EZH2Q15910 746 aaKnown RBP8.53□□□□□ -1.04
GYPB-215ENST00000513677 NGDNQ8NEJ9 315 aaKnown RBP8.53□□□□□ -1.04
GYPB-215ENST00000513677 USP35Q9P2H5 1018 aa8.53□□□□□ -1.04
GYPB-215ENST00000513677 TRPM3Q9HCF6 1732 aaPredicted RBP8.53□□□□□ -1.04
GYPB-215ENST00000513677 TNS1Q9HBL0 1735 aaKnown RBP8.52□□□□□ -1.05
GYPB-215ENST00000513677 TRIM37O94972 964 aa8.52□□□□□ -1.05
GYPB-215ENST00000513677 ADH1BP00325 375 aa8.52□□□□□ -1.05
GYPB-215ENST00000513677 CHRNA2Q15822 529 aa8.52□□□□□ -1.05
GYPB-215ENST00000513677 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
GYPB-215ENST00000513677 NUTM2GQ5VZR2 741 aa8.52□□□□□ -1.05
GYPB-215ENST00000513677 RNF19BQ6ZMZ0 732 aa8.52□□□□□ -1.05
GYPB-215ENST00000513677 PRDM11Q9NQV5 511 aa8.52□□□□□ -1.05
GYPB-215ENST00000513677 ALS2Q96Q42 1657 aa8.52□□□□□ -1.05
GYPB-215ENST00000513677 ADGRB2O60241 1585 aa8.52□□□□□ -1.05
GYPB-215ENST00000513677 ACIN1Q9UKV3 1341 aaKnown RBP8.52□□□□□ -1.05
GYPB-215ENST00000513677 FMNL1O95466 1100 aaPredicted RBP8.51□□□□□ -1.05
GYPB-215ENST00000513677 APBA3O96018 575 aa8.51□□□□□ -1.05
GYPB-215ENST00000513677 ZC3H6P61129 1189 aaKnown RBP8.51□□□□□ -1.05
GYPB-215ENST00000513677 Q3C1V9 767 aa8.51□□□□□ -1.05
GYPB-215ENST00000513677 RSBN1LQ6PCB5 846 aaPredicted RBP8.51□□□□□ -1.05
GYPB-215ENST00000513677 IL27Q8NEV9 243 aa8.51□□□□□ -1.05
GYPB-215ENST00000513677 SIRT1Q96EB6 747 aa8.51□□□□□ -1.05
GYPB-215ENST00000513677 THAP11Q96EK4 314 aa8.51□□□□□ -1.05
GYPB-215ENST00000513677 SPSB2Q99619 263 aa8.51□□□□□ -1.05
GYPB-215ENST00000513677 PCDHGC3Q9UN70 934 aa8.51□□□□□ -1.05
GYPB-215ENST00000513677 ANKARQ7Z5J8 1434 aa8.51□□□□□ -1.05
GYPB-215ENST00000513677 SPATA31A5Q5VU36 1347 aa8.51□□□□□ -1.05
GYPB-215ENST00000513677 SPATA31A7Q8IWB4 1347 aa8.51□□□□□ -1.05
GYPB-215ENST00000513677 PRR36Q9H6K5 1346 aa8.51□□□□□ -1.05
GYPB-215ENST00000513677 BRICD5Q6PL45 260 aa8.5□□□□□ -1.05
GYPB-215ENST00000513677 RIC3Q7Z5B4 369 aa8.5□□□□□ -1.05
GYPB-215ENST00000513677 RSPH6AQ9H0K4 717 aa8.5□□□□□ -1.05
GYPB-215ENST00000513677 SALL2Q9Y467 1007 aaPredicted RBP8.5□□□□□ -1.05
GYPB-215ENST00000513677 KIAA0232Q92628 1395 aa8.49□□□□□ -1.05
GYPB-215ENST00000513677 ZBTB7CA1YPR0 619 aa8.49□□□□□ -1.05
GYPB-215ENST00000513677 SPTLC1O15269 473 aa8.49□□□□□ -1.05
GYPB-215ENST00000513677 EVA1CP58658 441 aa8.49□□□□□ -1.05
GYPB-215ENST00000513677 SYMPKQ92797 1274 aaKnown RBP8.49□□□□□ -1.05
GYPB-215ENST00000513677 POLR3EQ9NVU0 708 aa8.49□□□□□ -1.05
GYPB-215ENST00000513677 LIMD1Q9UGP4 676 aa8.49□□□□□ -1.05
GYPB-215ENST00000513677 THSD7AQ9UPZ6 1657 aa8.49□□□□□ -1.05
GYPB-215ENST00000513677 TULP4Q9NRJ4 1543 aa8.49□□□□□ -1.05
GYPB-215ENST00000513677 CRYBG1Q9Y4K1 1723 aa8.49□□□□□ -1.05
GYPB-215ENST00000513677 PHRF1Q9P1Y6 1649 aaKnown RBP8.48□□□□□ -1.05
GYPB-215ENST00000513677 C6orf229H3BNL8 230 aa8.48□□□□□ -1.05
GYPB-215ENST00000513677 WASLO00401 505 aaPredicted RBP8.48□□□□□ -1.05
GYPB-215ENST00000513677 CLK2P49760 499 aaKnown RBP8.48□□□□□ -1.05
GYPB-215ENST00000513677 PDE3BQ13370 1112 aa8.48□□□□□ -1.05
GYPB-215ENST00000513677 CSPP1Q1MSJ5 1256 aa8.48□□□□□ -1.05
GYPB-215ENST00000513677 SH3D19Q5HYK7 790 aa8.48□□□□□ -1.05
GYPB-215ENST00000513677 DCAF11Q8TEB1 546 aa8.48□□□□□ -1.05
GYPB-215ENST00000513677 PPP1R1BQ9UD71 204 aaPredicted RBP8.48□□□□□ -1.05
GYPB-215ENST00000513677 PCDHB15Q9Y5E8 787 aa8.48□□□□□ -1.05
GYPB-215ENST00000513677 DLC1Q96QB1 1528 aa8.48□□□□□ -1.05
GYPB-215ENST00000513677 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
GYPB-215ENST00000513677 S1PR4O95977 384 aa8.47□□□□□ -1.05
GYPB-215ENST00000513677 YY1P25490 414 aa8.47□□□□□ -1.05
GYPB-215ENST00000513677 GJA5P36382 358 aa8.47□□□□□ -1.05
GYPB-215ENST00000513677 PPP1R18Q6NYC8 613 aa8.47□□□□□ -1.05
GYPB-215ENST00000513677 FAM196AQ6ZSG2 479 aa8.47□□□□□ -1.05
GYPB-215ENST00000513677 SLC6A16Q9GZN6 736 aa8.47□□□□□ -1.05
GYPB-215ENST00000513677 SPATA31A1Q5TZJ5 1347 aa8.47□□□□□ -1.05
GYPB-215ENST00000513677 ITSN1Q15811 1721 aa8.46□□□□□ -1.05
GYPB-215ENST00000513677 FAM160A2Q8N612 972 aaPredicted RBP8.46□□□□□ -1.06
GYPB-215ENST00000513677 NUDT16Q96DE0 195 aaKnown RBP8.46□□□□□ -1.06
GYPB-215ENST00000513677 CAMKK2Q96RR4 588 aa8.46□□□□□ -1.06
GYPB-215ENST00000513677 USB1Q9BQ65 265 aaKnown RBP8.46□□□□□ -1.06
GYPB-215ENST00000513677 PRDM9Q9NQV7 894 aa8.46□□□□□ -1.06
GYPB-215ENST00000513677 ADGRB1O14514 1584 aa8.46□□□□□ -1.06
GYPB-215ENST00000513677 GGCXP38435 758 aa8.45□□□□□ -1.06
GYPB-215ENST00000513677 MTMR2Q13614 643 aa8.45□□□□□ -1.06
GYPB-215ENST00000513677 NBPF8Q3BBV2 869 aa8.45□□□□□ -1.06
GYPB-215ENST00000513677 MSS51Q4VC12 460 aa8.45□□□□□ -1.06
GYPB-215ENST00000513677 NBPF14Q5TI25 921 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms