RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 HSPA1BP0DMV9 641 aaKnown RBP12.56□□□□□ -0.4
CAST-239ENST00000513666 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
CAST-239ENST00000513666 MYH14Q7Z406 1995 aaKnown RBP12.55□□□□□ -0.4
CAST-239ENST00000513666 EYA1Q99502 592 aa12.55□□□□□ -0.4
CAST-239ENST00000513666 WASHC2AQ641Q2 1341 aa12.54□□□□□ -0.4
CAST-239ENST00000513666 ZC3H4Q9UPT8 1303 aaKnown RBP12.54□□□□□ -0.4
CAST-239ENST00000513666 ERVV-2B6SEH9 535 aa12.53□□□□□ -0.4
CAST-239ENST00000513666 HAX1O00165 279 aa12.53□□□□□ -0.4
CAST-239ENST00000513666 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
CAST-239ENST00000513666 KDM6AO15550 1401 aaPredicted RBP12.53□□□□□ -0.4
CAST-239ENST00000513666 DDR1Q08345 913 aa12.52□□□□□ -0.4
CAST-239ENST00000513666 VEGFAP15692 232 aaPredicted RBP12.52□□□□□ -0.41
CAST-239ENST00000513666 CHRNA5P30532 468 aa12.52□□□□□ -0.41
CAST-239ENST00000513666 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
CAST-239ENST00000513666 GLTPD2A6NH11 291 aa12.51□□□□□ -0.41
CAST-239ENST00000513666 FKBP8Q14318 412 aa12.51□□□□□ -0.41
CAST-239ENST00000513666 SRP68Q9UHB9 627 aaKnown RBP12.51□□□□□ -0.41
CAST-239ENST00000513666 HSP90AB1P08238 724 aaKnown RBP12.5□□□□□ -0.41
CAST-239ENST00000513666 RASSF7Q02833 373 aa12.5□□□□□ -0.41
CAST-239ENST00000513666 CARD14Q9BXL6 1004 aa12.5□□□□□ -0.41
CAST-239ENST00000513666 POLRMTO00411 1230 aaKnown RBP12.49□□□□□ -0.41
CAST-239ENST00000513666 LMNB1P20700 586 aa12.49□□□□□ -0.41
CAST-239ENST00000513666 CRKLP46109 303 aaKnown RBP12.49□□□□□ -0.41
CAST-239ENST00000513666 TIAM2Q8IVF5 1701 aa12.49□□□□□ -0.41
CAST-239ENST00000513666 ADAMTS7Q9UKP4 1686 aa12.49□□□□□ -0.41
CAST-239ENST00000513666 TM4SF1P30408 202 aa12.48□□□□□ -0.41
CAST-239ENST00000513666 CDCA8Q53HL2 280 aa12.48□□□□□ -0.41
CAST-239ENST00000513666 TJP1Q07157 1748 aa12.48□□□□□ -0.41
CAST-239ENST00000513666 CABP4P57796 275 aa12.47□□□□□ -0.41
CAST-239ENST00000513666 EIF4A2Q14240 407 aaKnown RBP12.47□□□□□ -0.41
CAST-239ENST00000513666 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
CAST-239ENST00000513666 DLEC1Q9Y238 1755 aa12.47□□□□□ -0.41
CAST-239ENST00000513666 CCDC88AQ3V6T2 1871 aa12.47□□□□□ -0.41
CAST-239ENST00000513666 PTCD1O75127 700 aaKnown RBP12.47□□□□□ -0.41
CAST-239ENST00000513666 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
CAST-239ENST00000513666 AFDNP55196 1824 aaKnown RBP12.46□□□□□ -0.41
CAST-239ENST00000513666 POTECB2RU33 542 aa12.46□□□□□ -0.42
CAST-239ENST00000513666 PLEKHO1Q53GL0 409 aaPredicted RBP12.46□□□□□ -0.42
CAST-239ENST00000513666 NRXN2Q9P2S2 1712 aa12.45□□□□□ -0.42
CAST-239ENST00000513666 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
CAST-239ENST00000513666 EVX2Q03828 476 aa12.45□□□□□ -0.42
CAST-239ENST00000513666 ZNF530Q6P9A1 599 aaPredicted RBP12.45□□□□□ -0.42
CAST-239ENST00000513666 ZPR1O75312 459 aa12.44□□□□□ -0.42
CAST-239ENST00000513666 SLC34A2O95436 690 aa12.44□□□□□ -0.42
CAST-239ENST00000513666 USPL1Q5W0Q7 1092 aa12.44□□□□□ -0.42
CAST-239ENST00000513666 INTS5Q6P9B9 1019 aaKnown RBP12.44□□□□□ -0.42
CAST-239ENST00000513666 CREBZFQ9NS37 354 aa12.44□□□□□ -0.42
CAST-239ENST00000513666 AMOTQ4VCS5 1084 aa12.43□□□□□ -0.42
CAST-239ENST00000513666 TTLL6Q8N841 843 aa12.43□□□□□ -0.42
CAST-239ENST00000513666 NFKBIEO00221 500 aa12.42□□□□□ -0.42
CAST-239ENST00000513666 MTHFSP49914 203 aa12.42□□□□□ -0.42
CAST-239ENST00000513666 DPY19L2Q6NUT2 758 aa12.42□□□□□ -0.42
CAST-239ENST00000513666 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
CAST-239ENST00000513666 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
CAST-239ENST00000513666 SOS1Q07889 1333 aaPredicted RBP12.42□□□□□ -0.42
CAST-239ENST00000513666 FOXN1O15353 648 aa12.42□□□□□ -0.42
CAST-239ENST00000513666 NFIXQ14938 502 aa12.42□□□□□ -0.42
CAST-239ENST00000513666 PRDM10Q9NQV6 1147 aa12.42□□□□□ -0.42
CAST-239ENST00000513666 DICER1Q9UPY3 1922 aaKnown RBP12.42□□□□□ -0.42
CAST-239ENST00000513666 C1orf141Q5JVX7 400 aa12.41□□□□□ -0.42
CAST-239ENST00000513666 C2CD5Q86YS7 1000 aa12.41□□□□□ -0.42
CAST-239ENST00000513666 NARFQ9UHQ1 456 aa12.41□□□□□ -0.42
CAST-239ENST00000513666 SCN11AQ9UI33 1791 aa12.4□□□□□ -0.42
CAST-239ENST00000513666 SERPINB2P05120 415 aa12.4□□□□□ -0.42
CAST-239ENST00000513666 DNAJC10Q8IXB1 793 aa12.4□□□□□ -0.42
CAST-239ENST00000513666 CNTNAP1P78357 1384 aa12.4□□□□□ -0.42
CAST-239ENST00000513666 H0YIN7 160 aa12.39□□□□□ -0.43
CAST-239ENST00000513666 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
CAST-239ENST00000513666 COL15A1P39059 1388 aa12.39□□□□□ -0.43
CAST-239ENST00000513666 FER1L6Q2WGJ9 1857 aa12.39□□□□□ -0.43
CAST-239ENST00000513666 CYP19A1P11511 503 aaPredicted RBP12.38□□□□□ -0.43
CAST-239ENST00000513666 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
CAST-239ENST00000513666 CARMIL3Q8ND23 1372 aa12.38□□□□□ -0.43
CAST-239ENST00000513666 CTCFP49711 727 aaPredicted RBP12.37□□□□□ -0.43
CAST-239ENST00000513666 ERFEQ4G0M1 354 aa12.37□□□□□ -0.43
CAST-239ENST00000513666 AEBP1Q8IUX7 1158 aa12.37□□□□□ -0.43
CAST-239ENST00000513666 ANKRD31Q8N7Z5 1873 aa12.37□□□□□ -0.43
CAST-239ENST00000513666 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
CAST-239ENST00000513666 POTEJP0CG39 1038 aa12.37□□□□□ -0.43
CAST-239ENST00000513666 AIDAQ96BJ3 306 aa12.37□□□□□ -0.43
CAST-239ENST00000513666 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
CAST-239ENST00000513666 PASKQ96RG2 1323 aa12.36□□□□□ -0.43
CAST-239ENST00000513666 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
CAST-239ENST00000513666 ZBTB1Q9Y2K1 713 aa12.36□□□□□ -0.43
CAST-239ENST00000513666 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
CAST-239ENST00000513666 VIRMAQ69YN4 1812 aaKnown RBP12.35□□□□□ -0.43
CAST-239ENST00000513666 MRC1P22897 1456 aa12.35□□□□□ -0.43
CAST-239ENST00000513666 C21orf2O43822 256 aa12.35□□□□□ -0.43
CAST-239ENST00000513666 DDNO94850 711 aaPredicted RBP12.35□□□□□ -0.43
CAST-239ENST00000513666 SLC52A2Q9HAB3 445 aa12.35□□□□□ -0.43
CAST-239ENST00000513666 COL11A2P13942 1736 aaPredicted RBP12.35□□□□□ -0.43
CAST-239ENST00000513666 VEGFBP49765 207 aa12.34□□□□□ -0.43
CAST-239ENST00000513666 ZNF622Q969S3 477 aaKnown RBP eCLIP12.34□□□□□ -0.431e-7■■□□□ 14
CAST-239ENST00000513666 TAOK3Q9H2K8 898 aa12.34□□□□□ -0.43
CAST-239ENST00000513666 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
CAST-239ENST00000513666 SCN4AP35499 1836 aa12.34□□□□□ -0.43
CAST-239ENST00000513666 IQCA1LA6NCM1 817 aa12.33□□□□□ -0.44
CAST-239ENST00000513666 TMEM88BA6NKF7 163 aa12.33□□□□□ -0.44
CAST-239ENST00000513666 PDE6BP35913 854 aa12.33□□□□□ -0.44
CAST-239ENST00000513666 LBX1P52954 281 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms