RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 LINC00114Q6XXX2 140 aa8.42□□□□□ -1.06
ATP2C1-220ENST00000513636 SUV39H2Q9H5I1 410 aa8.42□□□□□ -1.06
ATP2C1-220ENST00000513636 PRR12Q9ULL5 1215 aa8.42□□□□□ -1.06
ATP2C1-220ENST00000513636 INHAP05111 366 aa8.41□□□□□ -1.06
ATP2C1-220ENST00000513636 TATP17735 454 aaPredicted RBP8.41□□□□□ -1.06
ATP2C1-220ENST00000513636 BRPF1P55201 1214 aaPredicted RBP8.41□□□□□ -1.06
ATP2C1-220ENST00000513636 PHTF2Q8N3S3 785 aa8.41□□□□□ -1.06
ATP2C1-220ENST00000513636 NDFIP2Q9NV92 336 aa8.41□□□□□ -1.06
ATP2C1-220ENST00000513636 C1QTNF9BB2RNN3 333 aa8.4□□□□□ -1.06
ATP2C1-220ENST00000513636 KHNYNO15037 678 aaKnown RBP8.4□□□□□ -1.06
ATP2C1-220ENST00000513636 ADH6P28332 368 aa8.4□□□□□ -1.06
ATP2C1-220ENST00000513636 MAP7D1Q3KQU3 841 aa8.4□□□□□ -1.06
ATP2C1-220ENST00000513636 SERTAD1Q9UHV2 236 aa8.4□□□□□ -1.06
ATP2C1-220ENST00000513636 DCDC2BA2VCK2 349 aa8.39□□□□□ -1.07
ATP2C1-220ENST00000513636 SMTNP53814 917 aa8.39□□□□□ -1.07
ATP2C1-220ENST00000513636 SEMA3FQ13275 785 aa8.39□□□□□ -1.07
ATP2C1-220ENST00000513636 CHSY3Q70JA7 882 aa8.39□□□□□ -1.07
ATP2C1-220ENST00000513636 KRTAP1-3Q8IUG1 177 aa8.39□□□□□ -1.07
ATP2C1-220ENST00000513636 A0A1W2PNR3 127 aa8.38□□□□□ -1.07
ATP2C1-220ENST00000513636 MAPTP10636 758 aaKnown RBP8.38□□□□□ -1.07
ATP2C1-220ENST00000513636 VAC14Q08AM6 782 aa8.38□□□□□ -1.07
ATP2C1-220ENST00000513636 BICDL1Q6ZP65 573 aa8.38□□□□□ -1.07
ATP2C1-220ENST00000513636 CABP1Q9NZU7 370 aa8.38□□□□□ -1.07
ATP2C1-220ENST00000513636 CD33P20138 364 aa8.37□□□□□ -1.07
ATP2C1-220ENST00000513636 WASHC4Q2M389 1173 aa8.37□□□□□ -1.07
ATP2C1-220ENST00000513636 NEUROD4Q9HD90 331 aa8.37□□□□□ -1.07
ATP2C1-220ENST00000513636 ALAS2P22557 587 aa8.36□□□□□ -1.07
ATP2C1-220ENST00000513636 ABL2P42684 1182 aa8.36□□□□□ -1.07
ATP2C1-220ENST00000513636 DGKGP49619 791 aa8.36□□□□□ -1.07
ATP2C1-220ENST00000513636 SCNN1DP51172 638 aa8.36□□□□□ -1.07
ATP2C1-220ENST00000513636 TNP2Q05952 138 aa8.36□□□□□ -1.07
ATP2C1-220ENST00000513636 FAM182BQ5T319 152 aa8.36□□□□□ -1.07
ATP2C1-220ENST00000513636 CD163Q86VB7 1156 aa8.36□□□□□ -1.07
ATP2C1-220ENST00000513636 PLPP7Q8NBV4 271 aa8.36□□□□□ -1.07
ATP2C1-220ENST00000513636 AVENQ9NQS1 362 aaPredicted RBP8.36□□□□□ -1.07
ATP2C1-220ENST00000513636 ATP4AP20648 1035 aa8.35□□□□□ -1.07
ATP2C1-220ENST00000513636 DNAAF2Q9NVR5 837 aaKnown RBP8.35□□□□□ -1.07
ATP2C1-220ENST00000513636 A6NJY4 79 aa8.34□□□□□ -1.07
ATP2C1-220ENST00000513636 SPDYE3A6NKU9 549 aa8.34□□□□□ -1.07
ATP2C1-220ENST00000513636 CDK2AP1O14519 115 aa8.34□□□□□ -1.07
ATP2C1-220ENST00000513636 BACH1O14867 736 aa8.34□□□□□ -1.07
ATP2C1-220ENST00000513636 HOXB4P17483 251 aaPredicted RBP8.34□□□□□ -1.07
ATP2C1-220ENST00000513636 PCBP4P57723 403 aaKnown RBP8.34□□□□□ -1.07
ATP2C1-220ENST00000513636 ZDHHC3Q9NYG2 299 aa8.34□□□□□ -1.07
ATP2C1-220ENST00000513636 MARK1Q9P0L2 795 aa8.34□□□□□ -1.07
ATP2C1-220ENST00000513636 SOX11P35716 441 aa8.33□□□□□ -1.08
ATP2C1-220ENST00000513636 GATA4P43694 442 aa8.33□□□□□ -1.08
ATP2C1-220ENST00000513636 IRF5Q13568 498 aa8.33□□□□□ -1.08
ATP2C1-220ENST00000513636 DOC2BQ14184 412 aa8.33□□□□□ -1.08
ATP2C1-220ENST00000513636 SEMA6BQ9H3T3 888 aa8.33□□□□□ -1.08
ATP2C1-220ENST00000513636 GDPD2Q9HCC8 539 aa8.33□□□□□ -1.08
ATP2C1-220ENST00000513636 CHIC2Q9UKJ5 165 aa8.33□□□□□ -1.08
ATP2C1-220ENST00000513636 CHRNA4P43681 627 aa8.32□□□□□ -1.08
ATP2C1-220ENST00000513636 PSME1Q06323 249 aa8.32□□□□□ -1.08
ATP2C1-220ENST00000513636 PLVAPQ9BX97 442 aa8.32□□□□□ -1.08
ATP2C1-220ENST00000513636 FAM157BP0CG42 384 aa8.31□□□□□ -1.08
ATP2C1-220ENST00000513636 SPATA31C1P0DKV0 1188 aa8.31□□□□□ -1.08
ATP2C1-220ENST00000513636 EML3Q32P44 896 aa8.31□□□□□ -1.08
ATP2C1-220ENST00000513636 PRRT3Q5FWE3 981 aa8.31□□□□□ -1.08
ATP2C1-220ENST00000513636 ZNF468Q5VIY5 522 aaPredicted RBP8.31□□□□□ -1.08
ATP2C1-220ENST00000513636 FCHSD1Q86WN1 690 aa8.31□□□□□ -1.08
ATP2C1-220ENST00000513636 SLC4A9Q96Q91 983 aa8.31□□□□□ -1.08
ATP2C1-220ENST00000513636 ZIC5Q96T25 663 aa8.31□□□□□ -1.08
ATP2C1-220ENST00000513636 APBA3O96018 575 aa8.3□□□□□ -1.08
ATP2C1-220ENST00000513636 LAMC2Q13753 1193 aa8.3□□□□□ -1.08
ATP2C1-220ENST00000513636 PARP3Q9Y6F1 533 aa8.3□□□□□ -1.08
ATP2C1-220ENST00000513636 MTFR1Q15390 333 aa8.29□□□□□ -1.08
ATP2C1-220ENST00000513636 KLF15Q9UIH9 416 aa8.29□□□□□ -1.08
ATP2C1-220ENST00000513636 NOD1Q9Y239 953 aa8.29□□□□□ -1.08
ATP2C1-220ENST00000513636 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-220ENST00000513636 ELOA3DA6NLF2 546 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-220ENST00000513636 TMEM229AB2RXF0 380 aa8.28□□□□□ -1.08
ATP2C1-220ENST00000513636 NEUROD1Q13562 356 aa8.28□□□□□ -1.08
ATP2C1-220ENST00000513636 ELOA3BQ3SY89 546 aa8.28□□□□□ -1.08
ATP2C1-220ENST00000513636 LCE3BQ5TA77 95 aa8.28□□□□□ -1.08
ATP2C1-220ENST00000513636 ELOA3Q8NG57 546 aa8.28□□□□□ -1.08
ATP2C1-220ENST00000513636 ZNF232Q9UNY5 417 aa8.28□□□□□ -1.08
ATP2C1-220ENST00000513636 SAMD5Q5TGI4 173 aa8.27□□□□□ -1.09
ATP2C1-220ENST00000513636 SYT9Q86SS6 491 aa8.27□□□□□ -1.09
ATP2C1-220ENST00000513636 WWC1Q8IX03 1113 aa8.27□□□□□ -1.09
ATP2C1-220ENST00000513636 LZTS3O60299 673 aaPredicted RBP8.26□□□□□ -1.09
ATP2C1-220ENST00000513636 SKIP12755 728 aa8.26□□□□□ -1.09
ATP2C1-220ENST00000513636 ZMYM1Q5SVZ6 1142 aa8.26□□□□□ -1.09
ATP2C1-220ENST00000513636 LRRC69Q6ZNQ3 347 aa8.26□□□□□ -1.09
ATP2C1-220ENST00000513636 L3MBTL2Q969R5 705 aa8.26□□□□□ -1.09
ATP2C1-220ENST00000513636 TRIM11Q96F44 468 aa8.26□□□□□ -1.09
ATP2C1-220ENST00000513636 IQSEC3Q9UPP2 1182 aaPredicted RBP8.26□□□□□ -1.09
ATP2C1-220ENST00000513636 GTF2IP78347 998 aa8.25□□□□□ -1.09
ATP2C1-220ENST00000513636 CHMP3Q9Y3E7 222 aa8.25□□□□□ -1.09
ATP2C1-220ENST00000513636 SCO2A0A1W2PP80 73 aa8.24□□□□□ -1.09
ATP2C1-220ENST00000513636 TRIM28Q13263 835 aaKnown RBP8.24□□□□□ -1.09
ATP2C1-220ENST00000513636 STRN4Q9NRL3 753 aa8.24□□□□□ -1.09
ATP2C1-220ENST00000513636 PCDHGA11Q9Y5H2 935 aa8.24□□□□□ -1.09
ATP2C1-220ENST00000513636 USP3Q9Y6I4 520 aa8.24□□□□□ -1.09
ATP2C1-220ENST00000513636 SLC24A1O60721 1099 aa8.23□□□□□ -1.09
ATP2C1-220ENST00000513636 SIN3BO75182 1162 aa8.23□□□□□ -1.09
ATP2C1-220ENST00000513636 NOS2P35228 1153 aa8.23□□□□□ -1.09
ATP2C1-220ENST00000513636 TXLNAP40222 546 aa8.23□□□□□ -1.09
ATP2C1-220ENST00000513636 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.23□□□□□ -1.09
ATP2C1-220ENST00000513636 NACC1Q96RE7 527 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms