RNA–Protein interactions for RNA: ENST00000513543.5

NFASC-223, Transcript of neurofascin, human

APPRIS P3 TSL 1 (best) BASIC

Gene NFASC, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFASC-223	ENST00000513543	USHBP1	Q8N6Y0	703 aa		13.08	□□□□□ -0.32
NFASC-223	ENST00000513543	CLASRP	Q8N2M8	674 aa	Known RBP	13.07	□□□□□ -0.32
NFASC-223	ENST00000513543	JAKMIP1	Q96N16	626 aa	Known RBP	13.07	□□□□□ -0.32
NFASC-223	ENST00000513543	CAST	P20810	708 aa	Known RBP	13.07	□□□□□ -0.32
NFASC-223	ENST00000513543	ATP10D	Q9P241	1426 aa		13.07	□□□□□ -0.32
NFASC-223	ENST00000513543	CYP2E1	P05181	493 aa	Predicted RBP	13.07	□□□□□ -0.32
NFASC-223	ENST00000513543	SF3A1	Q15459	793 aa	Known RBP	13.07	□□□□□ -0.32
NFASC-223	ENST00000513543	SPG7	Q9UQ90	795 aa		13.07	□□□□□ -0.32
NFASC-223	ENST00000513543	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	CHML	P26374	656 aa		13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	AIMP1	Q12904	312 aa	Known RBP	13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	GIMAP6	Q6P9H5	292 aa		13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	USP48	Q86UV5	1035 aa		13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	CPS1	P31327	1500 aa		13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	GADD45B	O75293	160 aa	Predicted RBP	13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	CCDC192	P0DO97	292 aa		13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	TPD52L1	Q16890	204 aa	Predicted RBP	13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	LARP1B	Q659C4	914 aa	Known RBP	13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	NOL7	Q9UMY1	257 aa	Known RBP	13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	SPDYE4	A6NLX3	237 aa		13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	LETM1	O95202	739 aa	Predicted RBP	13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.06	□□□□□ -0.32
NFASC-223	ENST00000513543	CLEC17A	Q6ZS10	378 aa		13.05	□□□□□ -0.32
NFASC-223	ENST00000513543	TSC1	Q92574	1164 aa		13.05	□□□□□ -0.32
NFASC-223	ENST00000513543	CNPY2	Q9Y2B0	182 aa		13.05	□□□□□ -0.32
NFASC-223	ENST00000513543	AATK	Q6ZMQ8	1374 aa		13.05	□□□□□ -0.32
NFASC-223	ENST00000513543	DYNC1I1	O14576	645 aa		13.05	□□□□□ -0.32
NFASC-223	ENST00000513543	ANXA1	P04083	346 aa		13.05	□□□□□ -0.32
NFASC-223	ENST00000513543	CCDC183	Q5T5S1	534 aa		13.05	□□□□□ -0.32
NFASC-223	ENST00000513543	EYA1	Q99502	592 aa		13.05	□□□□□ -0.32
NFASC-223	ENST00000513543	KIF24	Q5T7B8	1368 aa		13.05	□□□□□ -0.32
NFASC-223	ENST00000513543	CPA1	P15085	419 aa		13.05	□□□□□ -0.32
NFASC-223	ENST00000513543	CYP46A1	Q9Y6A2	500 aa		13.05	□□□□□ -0.32
NFASC-223	ENST00000513543	GNL2	Q13823	731 aa	Known RBP	13.04	□□□□□ -0.32
NFASC-223	ENST00000513543	CKAP2L	Q8IYA6	745 aa		13.04	□□□□□ -0.32
NFASC-223	ENST00000513543	PDCL2	Q8N4E4	241 aa		13.04	□□□□□ -0.32
NFASC-223	ENST00000513543	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
NFASC-223	ENST00000513543	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
NFASC-223	ENST00000513543	TNMD	Q9H2S6	317 aa		13.04	□□□□□ -0.32
NFASC-223	ENST00000513543	PHAX	Q9H814	394 aa	Known RBP	13.04	□□□□□ -0.32
NFASC-223	ENST00000513543	ATP8B2	P98198	1209 aa		13.04	□□□□□ -0.32
NFASC-223	ENST00000513543		A0A0G2JS52	829 aa		13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	MCM5	P33992	734 aa		13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	CPSF1	Q10570	1443 aa	Known RBP	13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	PRPF40B	Q6NWY9	871 aa	Known RBP	13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	FSD1	Q9BTV5	496 aa		13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	SRCIN1	Q9C0H9	1055 aa		13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	PDRG1	Q9NUG6	133 aa		13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	TMEM131L	A2VDJ0	1609 aa		13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	KRT85	P78386	507 aa		13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	RNF20	Q5VTR2	975 aa		13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	PPP1R42	Q7Z4L9	355 aa		13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	KIF20B	Q96Q89	1820 aa		13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	SIL1	Q9H173	461 aa		13.03	□□□□□ -0.32
NFASC-223	ENST00000513543	GNAT3	A8MTJ3	354 aa		13.02	□□□□□ -0.32
NFASC-223	ENST00000513543	BRD1	O95696	1058 aa		13.02	□□□□□ -0.32
NFASC-223	ENST00000513543	PPP4R3B	Q5MIZ7	849 aa		13.02	□□□□□ -0.32
NFASC-223	ENST00000513543	FMNL2	Q96PY5	1086 aa		13.02	□□□□□ -0.32
NFASC-223	ENST00000513543	KIAA0232	Q92628	1395 aa		13.02	□□□□□ -0.32
NFASC-223	ENST00000513543	STX6	O43752	255 aa		13.02	□□□□□ -0.33
NFASC-223	ENST00000513543	HSP90AB4P	Q58FF6	505 aa		13.02	□□□□□ -0.33
NFASC-223	ENST00000513543	TFIP11	Q9UBB9	837 aa	Known RBP	13.02	□□□□□ -0.33
NFASC-223	ENST00000513543	IGSF3	O75054	1194 aa		13.02	□□□□□ -0.33
NFASC-223	ENST00000513543	HS1BP3	Q53T59	392 aa		13.02	□□□□□ -0.33
NFASC-223	ENST00000513543	NUP62CL	Q9H1M0	184 aa		13.02	□□□□□ -0.33
NFASC-223	ENST00000513543	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.02	□□□□□ -0.33
NFASC-223	ENST00000513543	FILIP1	Q7Z7B0	1213 aa		13.01	□□□□□ -0.33
NFASC-223	ENST00000513543	C16orf45	Q96MC5	204 aa	Predicted RBP	13.01	□□□□□ -0.33
NFASC-223	ENST00000513543	A2ML1	A8K2U0	1454 aa		13.01	□□□□□ -0.33
NFASC-223	ENST00000513543	RGS12	O14924	1447 aa		13.01	□□□□□ -0.33
NFASC-223	ENST00000513543	CEBPA	P49715	358 aa	Predicted RBP	13.01	□□□□□ -0.33
NFASC-223	ENST00000513543	IL25	Q9H293	177 aa		13.01	□□□□□ -0.33
NFASC-223	ENST00000513543	HDAC5	Q9UQL6	1122 aa		13.01	□□□□□ -0.33
NFASC-223	ENST00000513543	RERE	Q9P2R6	1566 aa		13	□□□□□ -0.33
NFASC-223	ENST00000513543	HOMER1	Q86YM7	354 aa		13	□□□□□ -0.33
NFASC-223	ENST00000513543	TCEANC2	Q96MN5	208 aa		13	□□□□□ -0.33
NFASC-223	ENST00000513543	LIMCH1	Q9UPQ0	1083 aa		13	□□□□□ -0.33
NFASC-223	ENST00000513543	PREX1	Q8TCU6	1659 aa		13	□□□□□ -0.33
NFASC-223	ENST00000513543	TAF7	Q15545	349 aa	Predicted RBP	13	□□□□□ -0.33
NFASC-223	ENST00000513543	ABTB2	Q8N961	1025 aa		13	□□□□□ -0.33
NFASC-223	ENST00000513543	NECAB1	Q8N987	351 aa		13	□□□□□ -0.33
NFASC-223	ENST00000513543	SPATA32	Q96LK8	384 aa		13	□□□□□ -0.33
NFASC-223	ENST00000513543	OSBPL3	Q9H4L5	887 aa		13	□□□□□ -0.33
NFASC-223	ENST00000513543	ROBO2	Q9HCK4	1378 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	ANKRD26	Q9UPS8	1709 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	TPM3	P06753	285 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	MAP3K11	Q16584	847 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	CCAR2	Q8N163	923 aa	Known RBP	12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	CCDC112	Q8NEF3	446 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	CHMP4A	Q9BY43	222 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	PDC	P20941	246 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	GJB2	P29033	226 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	CCDC73	Q6ZRK6	1079 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	RHPN1	Q8TCX5	695 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	DDX11	Q96FC9	970 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	SDF4	Q9BRK5	362 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	USP44	Q9H0E7	712 aa		12.99	□□□□□ -0.33
NFASC-223	ENST00000513543	CLTC	Q00610	1675 aa	Known RBP	12.99	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms