RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 TIAM2Q8IVF5 1701 aa14.77□□□□□ -0.05
SKP2-207ENST00000513263 ARFGEF2Q9Y6D5 1785 aa14.76□□□□□ -0.05
SKP2-207ENST00000513263 A0A087WZG4 1122 aa14.76□□□□□ -0.05
SKP2-207ENST00000513263 FKBP8Q14318 412 aa14.76□□□□□ -0.05
SKP2-207ENST00000513263 CC2D1BQ5T0F9 858 aaKnown RBP14.76□□□□□ -0.05
SKP2-207ENST00000513263 DNAJC10Q8IXB1 793 aa14.76□□□□□ -0.05
SKP2-207ENST00000513263 CFAP53Q96M91 514 aa14.76□□□□□ -0.05
SKP2-207ENST00000513263 NARFQ9UHQ1 456 aa14.76□□□□□ -0.05
SKP2-207ENST00000513263 DICER1Q9UPY3 1922 aaKnown RBP14.76□□□□□ -0.05
SKP2-207ENST00000513263 WDR90Q96KV7 1748 aa14.75□□□□□ -0.05
SKP2-207ENST00000513263 POLRMTO00411 1230 aaKnown RBP14.75□□□□□ -0.05
SKP2-207ENST00000513263 TEFQ10587 303 aa14.75□□□□□ -0.05
SKP2-207ENST00000513263 MTHFSDQ2M296 383 aaKnown RBP14.75□□□□□ -0.05
SKP2-207ENST00000513263 INTS5Q6P9B9 1019 aaKnown RBP14.75□□□□□ -0.05
SKP2-207ENST00000513263 ARHGAP27Q6ZUM4 889 aa14.75□□□□□ -0.05
SKP2-207ENST00000513263 NPM2Q86SE8 214 aaKnown RBP14.75□□□□□ -0.05
SKP2-207ENST00000513263 PDZRN3Q9UPQ7 1066 aa14.75□□□□□ -0.05
SKP2-207ENST00000513263 KDM2BQ8NHM5 1336 aa14.74□□□□□ -0.05
SKP2-207ENST00000513263 GNAT3A8MTJ3 354 aa14.74□□□□□ -0.05
SKP2-207ENST00000513263 TOMM70O94826 608 aa14.74□□□□□ -0.05
SKP2-207ENST00000513263 CYP19A1P11511 503 aaPredicted RBP14.74□□□□□ -0.05
SKP2-207ENST00000513263 DDR1Q08345 913 aa14.74□□□□□ -0.05
SKP2-207ENST00000513263 LGR6Q9HBX8 967 aa14.74□□□□□ -0.05
SKP2-207ENST00000513263 SRP68Q9UHB9 627 aaKnown RBP14.74□□□□□ -0.05
SKP2-207ENST00000513263 KIF3CO14782 793 aa14.73□□□□□ -0.05
SKP2-207ENST00000513263 TM4SF1P30408 202 aa14.73□□□□□ -0.05
SKP2-207ENST00000513263 APLP1P51693 650 aa14.73□□□□□ -0.05
SKP2-207ENST00000513263 USPL1Q5W0Q7 1092 aa14.73□□□□□ -0.05
SKP2-207ENST00000513263 ANKRD31Q8N7Z5 1873 aa14.73□□□□□ -0.05
SKP2-207ENST00000513263 LAMB4A4D0S4 1761 aa14.73□□□□□ -0.05
SKP2-207ENST00000513263 CACNA1SQ13698 1873 aa14.72□□□□□ -0.05
SKP2-207ENST00000513263 U2SURPO15042 1029 aaKnown RBP14.72□□□□□ -0.05
SKP2-207ENST00000513263 SLC39A6Q13433 755 aa14.72□□□□□ -0.05
SKP2-207ENST00000513263 C16orf71Q8IYS4 520 aaPredicted RBP14.72□□□□□ -0.05
SKP2-207ENST00000513263 NUDCQ9Y266 331 aa14.72□□□□□ -0.05
SKP2-207ENST00000513263 ZBTB1Q9Y2K1 713 aa14.72□□□□□ -0.05
SKP2-207ENST00000513263 HEG1Q9ULI3 1381 aa14.72□□□□□ -0.05
SKP2-207ENST00000513263 KCNA3P22001 575 aa14.71□□□□□ -0.05
SKP2-207ENST00000513263 FER1L6Q2WGJ9 1857 aa14.71□□□□□ -0.05
SKP2-207ENST00000513263 CARMIL3Q8ND23 1372 aa14.71□□□□□ -0.06
SKP2-207ENST00000513263 CEMIPQ8WUJ3 1361 aa14.71□□□□□ -0.06
SKP2-207ENST00000513263 COL11A2P13942 1736 aaPredicted RBP14.7□□□□□ -0.06
SKP2-207ENST00000513263 C9orf131Q5VYM1 1079 aa14.7□□□□□ -0.06
SKP2-207ENST00000513263 ZNF790Q6PG37 636 aa14.7□□□□□ -0.06
SKP2-207ENST00000513263 FMNL2Q96PY5 1086 aa14.7□□□□□ -0.06
SKP2-207ENST00000513263 IL6STP40189 918 aaPredicted RBP14.69□□□□□ -0.06
SKP2-207ENST00000513263 NFIXQ14938 502 aa14.69□□□□□ -0.06
SKP2-207ENST00000513263 RBM46Q8TBY0 533 aaKnown RBP14.69□□□□□ -0.06
SKP2-207ENST00000513263 DLG5Q8TDM6 1919 aa14.68□□□□□ -0.06
SKP2-207ENST00000513263 PCNTO95613 3336 aa14.68□□□□□ -0.06
SKP2-207ENST00000513263 EIF5P55010 431 aaKnown RBP14.68□□□□□ -0.06
SKP2-207ENST00000513263 RNF181Q9P0P0 153 aa14.68□□□□□ -0.06
SKP2-207ENST00000513263 H0YIN7 160 aa14.67□□□□□ -0.06
SKP2-207ENST00000513263 SERPINB2P05120 415 aa14.67□□□□□ -0.06
SKP2-207ENST00000513263 FSTL1Q12841 308 aa14.67□□□□□ -0.06
SKP2-207ENST00000513263 TTLL6Q8N841 843 aa14.67□□□□□ -0.06
SKP2-207ENST00000513263 LMNB1P20700 586 aa14.66□□□□□ -0.06
SKP2-207ENST00000513263 CANXP27824 592 aaKnown RBP14.66□□□□□ -0.06
SKP2-207ENST00000513263 CHRNA5P30532 468 aa14.66□□□□□ -0.06
SKP2-207ENST00000513263 PDE6BP35913 854 aa14.66□□□□□ -0.06
SKP2-207ENST00000513263 RTF1Q92541 710 aaKnown RBP14.66□□□□□ -0.06
SKP2-207ENST00000513263 ZNF496Q96IT1 587 aaPredicted RBP14.66□□□□□ -0.06
SKP2-207ENST00000513263 RGL2O15211 777 aa14.65□□□□□ -0.06
SKP2-207ENST00000513263 NEFMP07197 916 aa14.65□□□□□ -0.06
SKP2-207ENST00000513263 ZNF652Q9Y2D9 606 aa14.65□□□□□ -0.06
SKP2-207ENST00000513263 KDM3BQ7LBC6 1761 aa14.65□□□□□ -0.06
SKP2-207ENST00000513263 BTBD11A6QL63 1104 aa14.64□□□□□ -0.07
SKP2-207ENST00000513263 NPHP1O15259 732 aa14.64□□□□□ -0.07
SKP2-207ENST00000513263 PRKAR2BP31323 418 aa14.64□□□□□ -0.07
SKP2-207ENST00000513263 ST5P78524 1137 aa14.64□□□□□ -0.07
SKP2-207ENST00000513263 SOGA3Q5TF21 947 aa14.64□□□□□ -0.07
SKP2-207ENST00000513263 C2CD5Q86YS7 1000 aa14.64□□□□□ -0.07
SKP2-207ENST00000513263 IL17REQ8NFR9 667 aa14.64□□□□□ -0.07
SKP2-207ENST00000513263 BRIP1Q9BX63 1249 aa14.64□□□□□ -0.07
SKP2-207ENST00000513263 RSPH6AQ9H0K4 717 aa14.64□□□□□ -0.07
SKP2-207ENST00000513263 NMRK2Q9NPI5 230 aa14.64□□□□□ -0.07
SKP2-207ENST00000513263 HTATSF1O43719 755 aaKnown RBP14.63□□□□□ -0.07
SKP2-207ENST00000513263 CNBD1Q8NA66 436 aa14.63□□□□□ -0.07
SKP2-207ENST00000513263 BCL2L12Q9HB09 334 aa14.63□□□□□ -0.07
SKP2-207ENST00000513263 SETDB2Q96T68 719 aa14.62□□□□□ -0.07
SKP2-207ENST00000513263 ZNF330Q9Y3S2 320 aaPredicted RBP14.62□□□□□ -0.07
SKP2-207ENST00000513263 SCN4AP35499 1836 aa14.62□□□□□ -0.07
SKP2-207ENST00000513263 U2AF1L5P0DN76 240 aaPredicted RBP14.61□□□□□ -0.07
SKP2-207ENST00000513263 U2AF1Q01081 240 aaKnown RBP eCLIP14.61□□□□□ -0.07
SKP2-207ENST00000513263 IFFO2Q5TF58 517 aa14.61□□□□□ -0.07
SKP2-207ENST00000513263 CLEC4GQ6UXB4 293 aa14.61□□□□□ -0.07
SKP2-207ENST00000513263 SMC1BQ8NDV3 1235 aa14.61□□□□□ -0.07
SKP2-207ENST00000513263 NUP98P52948 1817 aa14.61□□□□□ -0.07
SKP2-207ENST00000513263 SNRPA1P09661 255 aaKnown RBP14.6□□□□□ -0.07
SKP2-207ENST00000513263 BICDL1Q6ZP65 573 aa14.6□□□□□ -0.07
SKP2-207ENST00000513263 CNKSR1Q969H4 720 aa14.6□□□□□ -0.07
SKP2-207ENST00000513263 LTBP3Q9NS15 1303 aa14.6□□□□□ -0.07
SKP2-207ENST00000513263 SLX4Q8IY92 1834 aa14.59□□□□□ -0.07
SKP2-207ENST00000513263 GLTPD2A6NH11 291 aa14.59□□□□□ -0.07
SKP2-207ENST00000513263 PPP2R1AP30153 589 aa14.59□□□□□ -0.07
SKP2-207ENST00000513263 CNGB1Q14028 1251 aaPredicted RBP14.59□□□□□ -0.07
SKP2-207ENST00000513263 TBC1D9BQ66K14 1250 aa14.59□□□□□ -0.07
SKP2-207ENST00000513263 PRR5LQ6MZQ0 368 aa14.59□□□□□ -0.07
SKP2-207ENST00000513263 DZIP3Q86Y13 1208 aaKnown RBP14.59□□□□□ -0.07
SKP2-207ENST00000513263 PNNQ9H307 717 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms