RNA–Protein interactions for RNA: ENST00000513044.1

RBM47-210, Transcript of RNA binding motif protein 47, human

TSL 2

Gene RBM47, Length 2,118 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM47-210	ENST00000513044	UNC5CL	Q8IV45	518 aa		10.46	□□□□□ -0.73
RBM47-210	ENST00000513044	BTBD11	A6QL63	1104 aa		10.46	□□□□□ -0.74
RBM47-210	ENST00000513044	ERVV-2	B6SEH9	535 aa		10.46	□□□□□ -0.74
RBM47-210	ENST00000513044	MS4A1	P11836	297 aa		10.46	□□□□□ -0.74
RBM47-210	ENST00000513044	KRT24	Q2M2I5	525 aa		10.46	□□□□□ -0.74
RBM47-210	ENST00000513044	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.46	□□□□□ -0.74
RBM47-210	ENST00000513044	VIRMA	Q69YN4	1812 aa	Known RBP	10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	IPO8	O15397	1037 aa	Known RBP	10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	VPS72	Q15906	364 aa		10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	DHX37	Q8IY37	1157 aa	Known RBP	10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	EXOC6	Q8TAG9	804 aa		10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	BCL2L13	Q9BXK5	485 aa		10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	TNS2	Q63HR2	1409 aa		10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	ELL2	O00472	640 aa	Predicted RBP	10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	AAMP	Q13685	434 aa		10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	ATF7IP	Q6VMQ6	1270 aa		10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	CRBN	Q96SW2	442 aa		10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	WDR70	Q9NW82	654 aa		10.45	□□□□□ -0.74
RBM47-210	ENST00000513044	TRIM27	P14373	513 aa		10.44	□□□□□ -0.74
RBM47-210	ENST00000513044	BRD2	P25440	801 aa	Known RBP	10.44	□□□□□ -0.74
RBM47-210	ENST00000513044	FAM212A	Q96EL1	285 aa		10.44	□□□□□ -0.74
RBM47-210	ENST00000513044	NOB1	Q9ULX3	412 aa	Known RBP	10.44	□□□□□ -0.74
RBM47-210	ENST00000513044	NFATC2IP	Q8NCF5	419 aa		10.43	□□□□□ -0.74
RBM47-210	ENST00000513044	USP35	Q9P2H5	1018 aa		10.43	□□□□□ -0.74
RBM47-210	ENST00000513044	KCNQ3	O43525	872 aa		10.43	□□□□□ -0.74
RBM47-210	ENST00000513044	ZNF790	Q6PG37	636 aa		10.43	□□□□□ -0.74
RBM47-210	ENST00000513044	FRAT1	Q92837	279 aa	Predicted RBP	10.43	□□□□□ -0.74
RBM47-210	ENST00000513044	NGLY1	Q96IV0	654 aa		10.43	□□□□□ -0.74
RBM47-210	ENST00000513044	EXOC5	O00471	708 aa		10.42	□□□□□ -0.74
RBM47-210	ENST00000513044	GIGYF1	O75420	1035 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM47-210	ENST00000513044	RLBP1	P12271	317 aa		10.42	□□□□□ -0.74
RBM47-210	ENST00000513044	CCDC30	Q5VVM6	783 aa		10.42	□□□□□ -0.74
RBM47-210	ENST00000513044	DZIP1L	Q8IYY4	767 aa	Known RBP	10.42	□□□□□ -0.74
RBM47-210	ENST00000513044	C8orf37	Q96NL8	207 aa		10.42	□□□□□ -0.74
RBM47-210	ENST00000513044	PTPRC	P08575	1304 aa		10.42	□□□□□ -0.74
RBM47-210	ENST00000513044	CANX	P27824	592 aa	Known RBP	10.42	□□□□□ -0.74
RBM47-210	ENST00000513044	CABP4	P57796	275 aa		10.42	□□□□□ -0.74
RBM47-210	ENST00000513044	TAF7L	Q5H9L4	462 aa		10.42	□□□□□ -0.74
RBM47-210	ENST00000513044	ABCC4	O15439	1325 aa		10.42	□□□□□ -0.74
RBM47-210	ENST00000513044	RGS12	O14924	1447 aa		10.41	□□□□□ -0.74
RBM47-210	ENST00000513044	PAPPA	Q13219	1627 aa		10.41	□□□□□ -0.74
RBM47-210	ENST00000513044	DDX54	Q8TDD1	881 aa	Known RBP	10.41	□□□□□ -0.74
RBM47-210	ENST00000513044	PANK1	Q8TE04	598 aa		10.41	□□□□□ -0.74
RBM47-210	ENST00000513044	API5	Q9BZZ5	524 aa	Known RBP	10.41	□□□□□ -0.74
RBM47-210	ENST00000513044	GLI3	P10071	1580 aa		10.41	□□□□□ -0.74
RBM47-210	ENST00000513044	TOGARAM1	Q9Y4F4	1720 aa		10.41	□□□□□ -0.74
RBM47-210	ENST00000513044	MNX1	P50219	401 aa	Predicted RBP	10.4	□□□□□ -0.74
RBM47-210	ENST00000513044	MVP	Q14764	893 aa	Known RBP	10.4	□□□□□ -0.74
RBM47-210	ENST00000513044	TNN	Q9UQP3	1299 aa		10.4	□□□□□ -0.74
RBM47-210	ENST00000513044	ONECUT3	O60422	494 aa	Predicted RBP	10.4	□□□□□ -0.74
RBM47-210	ENST00000513044	USP21	Q9UK80	565 aa		10.4	□□□□□ -0.74
RBM47-210	ENST00000513044	ATRN	O75882	1429 aa		10.39	□□□□□ -0.75
RBM47-210	ENST00000513044	DDB1	Q16531	1140 aa		10.39	□□□□□ -0.75
RBM47-210	ENST00000513044	HDGFL1	Q5TGJ6	251 aa		10.39	□□□□□ -0.75
RBM47-210	ENST00000513044	COG6	Q9Y2V7	657 aa		10.39	□□□□□ -0.75
RBM47-210	ENST00000513044	UBR2	Q8IWV8	1755 aa		10.39	□□□□□ -0.75
RBM47-210	ENST00000513044	THSD7A	Q9UPZ6	1657 aa		10.39	□□□□□ -0.75
RBM47-210	ENST00000513044	RASEF	Q8IZ41	740 aa		10.39	□□□□□ -0.75
RBM47-210	ENST00000513044	STK31	Q9BXU1	1019 aa		10.39	□□□□□ -0.75
RBM47-210	ENST00000513044	KCP	Q6ZWJ8	1503 aa		10.38	□□□□□ -0.75
RBM47-210	ENST00000513044	BCL9	O00512	1426 aa		10.38	□□□□□ -0.75
RBM47-210	ENST00000513044	IGSF3	O75054	1194 aa		10.38	□□□□□ -0.75
RBM47-210	ENST00000513044	SLC39A6	Q13433	755 aa		10.38	□□□□□ -0.75
RBM47-210	ENST00000513044	INTS3	Q68E01	1043 aa	Known RBP	10.38	□□□□□ -0.75
RBM47-210	ENST00000513044	FTSJ3	Q8IY81	847 aa	Known RBP	10.38	□□□□□ -0.75
RBM47-210	ENST00000513044	ZNF496	Q96IT1	587 aa	Predicted RBP	10.38	□□□□□ -0.75
RBM47-210	ENST00000513044	FMNL2	Q96PY5	1086 aa		10.38	□□□□□ -0.75
RBM47-210	ENST00000513044	DDX19B	Q9UMR2	479 aa		10.38	□□□□□ -0.75
RBM47-210	ENST00000513044	TESPA1	A2RU30	521 aa	Predicted RBP	10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	TCERG1	O14776	1098 aa	Known RBP	10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	SNRPA1	P09661	255 aa	Known RBP	10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	B4GALNT3	Q6L9W6	998 aa		10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	TMEM57	Q8N5G2	664 aa		10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	ARHGEF1	Q92888	912 aa	Known RBP	10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	CLUAP1	Q96AJ1	413 aa		10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	CCDC136	Q96JN2	1154 aa		10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	CACNA1F	O60840	1977 aa		10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	AFF2	P51816	1311 aa		10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	G2E3	Q7L622	706 aa		10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	TTC5	Q8N0Z6	440 aa		10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	MARCH10	Q8NA82	808 aa	Predicted RBP	10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	GJD4	Q96KN9	370 aa	Predicted RBP	10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	DBF4	Q9UBU7	674 aa	Predicted RBP	10.37	□□□□□ -0.75
RBM47-210	ENST00000513044	FLII	Q13045	1269 aa		10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	PIGB	Q92521	554 aa		10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	ZBTB40	Q9NUA8	1239 aa		10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	TMOD3	Q9NYL9	352 aa		10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	TRPC5	Q9UL62	973 aa	Predicted RBP	10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	ERBB4	Q15303	1308 aa		10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	PXDNL	A1KZ92	1463 aa		10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	ZBTB7B	O15156	539 aa	Predicted RBP	10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	PDIA6	Q15084	440 aa		10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	MEX3C	Q5U5Q3	659 aa	Known RBP	10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	PKNOX2	Q96KN3	472 aa		10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	CHMP4B	Q9H444	224 aa	Known RBP	10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	CCDC9	Q9Y3X0	531 aa	Known RBP	10.36	□□□□□ -0.75
RBM47-210	ENST00000513044	KDM2B	Q8NHM5	1336 aa		10.35	□□□□□ -0.75
RBM47-210	ENST00000513044	PRAMEF22	A3QJZ6	481 aa		10.35	□□□□□ -0.75
RBM47-210	ENST00000513044	FAM98C	Q17RN3	349 aa	Known RBP	10.35	□□□□□ -0.75
RBM47-210	ENST00000513044	LRP10	Q7Z4F1	713 aa		10.35	□□□□□ -0.75

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