RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 U2AF1Q01081 240 aaKnown RBP eCLIP16.11■□□□□ 0.17
CDK7-208ENST00000512687 SRP68Q9UHB9 627 aaKnown RBP16.11■□□□□ 0.17
CDK7-208ENST00000512687 C10orf71Q711Q0 1435 aa16.11■□□□□ 0.17
CDK7-208ENST00000512687 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
CDK7-208ENST00000512687 PXDNLA1KZ92 1463 aa16.1■□□□□ 0.17
CDK7-208ENST00000512687 CYP19A1P11511 503 aaPredicted RBP16.1■□□□□ 0.17
CDK7-208ENST00000512687 CCDC87Q9NVE4 849 aa16.1■□□□□ 0.17
CDK7-208ENST00000512687 NUDCQ9Y266 331 aa16.1■□□□□ 0.17
CDK7-208ENST00000512687 DLEC1Q9Y238 1755 aa16.09■□□□□ 0.17
CDK7-208ENST00000512687 RFC4P35249 363 aa16.09■□□□□ 0.17
CDK7-208ENST00000512687 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
CDK7-208ENST00000512687 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
CDK7-208ENST00000512687 USP42Q9H9J4 1324 aaKnown RBP16.09■□□□□ 0.17
CDK7-208ENST00000512687 TEFQ10587 303 aa16.08■□□□□ 0.16
CDK7-208ENST00000512687 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.16
CDK7-208ENST00000512687 COL15A1P39059 1388 aa16.08■□□□□ 0.16
CDK7-208ENST00000512687 FCHSD2O94868 740 aa16.07■□□□□ 0.16
CDK7-208ENST00000512687 VSIG10Q8N0Z9 540 aa16.07■□□□□ 0.16
CDK7-208ENST00000512687 NLGN1Q8N2Q7 840 aa16.07■□□□□ 0.16
CDK7-208ENST00000512687 ZNF496Q96IT1 587 aaPredicted RBP16.07■□□□□ 0.16
CDK7-208ENST00000512687 WWC3Q9ULE0 1092 aa16.07■□□□□ 0.16
CDK7-208ENST00000512687 HEG1Q9ULI3 1381 aa16.07■□□□□ 0.16
CDK7-208ENST00000512687 ANKRD31Q8N7Z5 1873 aa16.07■□□□□ 0.16
CDK7-208ENST00000512687 KCNQ3O43525 872 aa16.06■□□□□ 0.16
CDK7-208ENST00000512687 FKBP8Q14318 412 aa16.06■□□□□ 0.16
CDK7-208ENST00000512687 ZNF790Q6PG37 636 aa16.06■□□□□ 0.16
CDK7-208ENST00000512687 ZNF784Q8NCA9 323 aaPredicted RBP16.06■□□□□ 0.16
CDK7-208ENST00000512687 DDR1Q08345 913 aa16.05■□□□□ 0.16
CDK7-208ENST00000512687 MCM10Q7L590 875 aa16.05■□□□□ 0.16
CDK7-208ENST00000512687 TTC5Q8N0Z6 440 aa16.05■□□□□ 0.16
CDK7-208ENST00000512687 DDX10Q13206 875 aaKnown RBP16.04■□□□□ 0.16
CDK7-208ENST00000512687 DCTN1Q14203 1278 aa16.04■□□□□ 0.16
CDK7-208ENST00000512687 CACNA1SQ13698 1873 aa16.03■□□□□ 0.16
CDK7-208ENST00000512687 USPL1Q5W0Q7 1092 aa16.03■□□□□ 0.16
CDK7-208ENST00000512687 PLEKHF1Q96S99 279 aa16.03■□□□□ 0.16
CDK7-208ENST00000512687 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
CDK7-208ENST00000512687 COL11A2P13942 1736 aaPredicted RBP16.02■□□□□ 0.16
CDK7-208ENST00000512687 BTBD11A6QL63 1104 aa16.02■□□□□ 0.16
CDK7-208ENST00000512687 GRIN3BO60391 1043 aa16.02■□□□□ 0.16
CDK7-208ENST00000512687 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.16
CDK7-208ENST00000512687 BCL2L12Q9HB09 334 aa16.02■□□□□ 0.16
CDK7-208ENST00000512687 SBF1O95248 1867 aa16.01■□□□□ 0.15
CDK7-208ENST00000512687 POLRMTO00411 1230 aaKnown RBP16.01■□□□□ 0.15
CDK7-208ENST00000512687 TM4SF1P30408 202 aa16.01■□□□□ 0.15
CDK7-208ENST00000512687 FMNL2Q96PY5 1086 aa16.01■□□□□ 0.15
CDK7-208ENST00000512687 CCDC88AQ3V6T2 1871 aa16■□□□□ 0.15
CDK7-208ENST00000512687 A0A0G2JLW4 131 aa16■□□□□ 0.15
CDK7-208ENST00000512687 PRAMEF22A3QJZ6 481 aa16■□□□□ 0.15
CDK7-208ENST00000512687 EIF5P55010 431 aaKnown RBP16■□□□□ 0.15
CDK7-208ENST00000512687 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
CDK7-208ENST00000512687 NARFQ9UHQ1 456 aa16■□□□□ 0.15
CDK7-208ENST00000512687 ZPR1O75312 459 aa15.99■□□□□ 0.15
CDK7-208ENST00000512687 CAPN15O75808 1086 aa15.99■□□□□ 0.15
CDK7-208ENST00000512687 STARD3NLO95772 234 aa15.99■□□□□ 0.15
CDK7-208ENST00000512687 DPEP1P16444 411 aa15.99■□□□□ 0.15
CDK7-208ENST00000512687 RALBP1Q15311 655 aa15.99■□□□□ 0.15
CDK7-208ENST00000512687 ADCY9O60503 1353 aa15.99■□□□□ 0.15
CDK7-208ENST00000512687 NUP98P52948 1817 aa15.98■□□□□ 0.15
CDK7-208ENST00000512687 HTATSF1O43719 755 aaKnown RBP15.98■□□□□ 0.15
CDK7-208ENST00000512687 A1BGP04217 495 aa15.98■□□□□ 0.15
CDK7-208ENST00000512687 TGFB2P61812 414 aa15.98■□□□□ 0.15
CDK7-208ENST00000512687 NFIXQ14938 502 aa15.98■□□□□ 0.15
CDK7-208ENST00000512687 SPINK5Q9NQ38 1064 aaPredicted RBP15.98■□□□□ 0.15
CDK7-208ENST00000512687 KCNA3P22001 575 aa15.97■□□□□ 0.15
CDK7-208ENST00000512687 USP16Q9Y5T5 823 aa15.97■□□□□ 0.15
CDK7-208ENST00000512687 CARMIL3Q8ND23 1372 aa15.97■□□□□ 0.15
CDK7-208ENST00000512687 MYBBP1AQ9BQG0 1328 aaKnown RBP15.96■□□□□ 0.15
CDK7-208ENST00000512687 ARFGEF2Q9Y6D5 1785 aa15.96■□□□□ 0.15
CDK7-208ENST00000512687 PIP4K2AP48426 406 aaPredicted RBP15.96■□□□□ 0.15
CDK7-208ENST00000512687 NFE2L2Q16236 605 aa15.96■□□□□ 0.15
CDK7-208ENST00000512687 THUMPD2Q9BTF0 503 aaKnown RBP15.96■□□□□ 0.15
CDK7-208ENST00000512687 TEX13AQ9BXU3 409 aaPredicted RBP15.96■□□□□ 0.15
CDK7-208ENST00000512687 ATP10DQ9P241 1426 aa15.95■□□□□ 0.14
CDK7-208ENST00000512687 MIS18AQ9NYP9 233 aa15.95■□□□□ 0.14
CDK7-208ENST00000512687 BCS1LQ9Y276 419 aa15.95■□□□□ 0.14
CDK7-208ENST00000512687 ZNF330Q9Y3S2 320 aaPredicted RBP15.95■□□□□ 0.14
CDK7-208ENST00000512687 CHRNA5P30532 468 aa15.94■□□□□ 0.14
CDK7-208ENST00000512687 IL6STP40189 918 aaPredicted RBP15.94■□□□□ 0.14
CDK7-208ENST00000512687 TAF7Q15545 349 aaPredicted RBP15.94■□□□□ 0.14
CDK7-208ENST00000512687 TBC1D2BQ9UPU7 963 aa15.94■□□□□ 0.14
CDK7-208ENST00000512687 A0A087WZG4 1122 aa15.93■□□□□ 0.14
CDK7-208ENST00000512687 NEFMP07197 916 aa15.93■□□□□ 0.14
CDK7-208ENST00000512687 TBC1D9BQ66K14 1250 aa15.93■□□□□ 0.14
CDK7-208ENST00000512687 MAPK8IP3Q9UPT6 1336 aa15.93■□□□□ 0.14
CDK7-208ENST00000512687 CAMTA2O94983 1202 aa15.92■□□□□ 0.14
CDK7-208ENST00000512687 SERPINB2P05120 415 aa15.92■□□□□ 0.14
CDK7-208ENST00000512687 SNRPA1P09661 255 aaKnown RBP15.92■□□□□ 0.14
CDK7-208ENST00000512687 BICDL1Q6ZP65 573 aa15.92■□□□□ 0.14
CDK7-208ENST00000512687 TIAM2Q8IVF5 1701 aa15.91■□□□□ 0.14
CDK7-208ENST00000512687 NBPF26B4DH59 902 aa15.91■□□□□ 0.14
CDK7-208ENST00000512687 NBPF10Q6P3W6 841 aaKnown RBP15.91■□□□□ 0.14
CDK7-208ENST00000512687 NBPF15Q8N660 670 aa15.91■□□□□ 0.14
CDK7-208ENST00000512687 FER1L6Q2WGJ9 1857 aa15.91■□□□□ 0.14
CDK7-208ENST00000512687 SLX4Q8IY92 1834 aa15.9■□□□□ 0.14
CDK7-208ENST00000512687 ANKRD36CQ5JPF3 1778 aa15.9■□□□□ 0.14
CDK7-208ENST00000512687 DICER1Q9UPY3 1922 aaKnown RBP15.9■□□□□ 0.14
CDK7-208ENST00000512687 TNRC6CQ9HCJ0 1690 aaKnown RBP15.89■□□□□ 0.13
CDK7-208ENST00000512687 DZIP3Q86Y13 1208 aaKnown RBP15.89■□□□□ 0.13
CDK7-208ENST00000512687 CCDC146Q8IYE0 955 aa15.89■□□□□ 0.13
CDK7-208ENST00000512687 PNNQ9H307 717 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms