RNA–Protein interactions for RNA: ENST00000512345.5

LDB2-214, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 923 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-214ENST00000512345 UTRNP46939 3433 aa13.46□□□□□ -0.25
LDB2-214ENST00000512345 E9PSI1 815 aa13.46□□□□□ -0.25
LDB2-214ENST00000512345 PHKG2P15735 406 aa13.46□□□□□ -0.25
LDB2-214ENST00000512345 ZNF530Q6P9A1 599 aaPredicted RBP13.46□□□□□ -0.25
LDB2-214ENST00000512345 PAXIP1Q6ZW49 1069 aaPredicted RBP13.46□□□□□ -0.25
LDB2-214ENST00000512345 TRMT2AQ8IZ69 625 aaKnown RBP13.46□□□□□ -0.25
LDB2-214ENST00000512345 IFNL2Q8IZJ0 200 aa13.46□□□□□ -0.25
LDB2-214ENST00000512345 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.46□□□□□ -0.25
LDB2-214ENST00000512345 COL24A1Q17RW2 1714 aa13.46□□□□□ -0.25
LDB2-214ENST00000512345 IL16Q14005 1332 aa13.45□□□□□ -0.26
LDB2-214ENST00000512345 CALD1Q05682 793 aaKnown RBP13.45□□□□□ -0.26
LDB2-214ENST00000512345 DCTN1Q14203 1278 aa13.45□□□□□ -0.26
LDB2-214ENST00000512345 AKAP4Q5JQC9 854 aa13.45□□□□□ -0.26
LDB2-214ENST00000512345 FLAD1Q8NFF5 587 aa13.45□□□□□ -0.26
LDB2-214ENST00000512345 C5P01031 1676 aa13.44□□□□□ -0.26
LDB2-214ENST00000512345 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
LDB2-214ENST00000512345 DUSP27Q5VZP5 1158 aa13.44□□□□□ -0.26
LDB2-214ENST00000512345 MCM10Q7L590 875 aa13.44□□□□□ -0.26
LDB2-214ENST00000512345 THUMPD2Q9BTF0 503 aaKnown RBP13.44□□□□□ -0.26
LDB2-214ENST00000512345 TMOD3Q9NYL9 352 aa13.44□□□□□ -0.26
LDB2-214ENST00000512345 ITGB4P16144 1822 aa13.43□□□□□ -0.26
LDB2-214ENST00000512345 MSL1Q68DK7 614 aa13.43□□□□□ -0.26
LDB2-214ENST00000512345 IL17REQ8NFR9 667 aa13.43□□□□□ -0.26
LDB2-214ENST00000512345 AK7Q96M32 723 aa13.43□□□□□ -0.26
LDB2-214ENST00000512345 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
LDB2-214ENST00000512345 LOC102724428A0A0B4J2F2 783 aa13.42□□□□□ -0.26
LDB2-214ENST00000512345 SIK1P57059 783 aa13.42□□□□□ -0.26
LDB2-214ENST00000512345 GPR162Q16538 588 aa13.42□□□□□ -0.26
LDB2-214ENST00000512345 NLGN2Q8NFZ4 835 aa13.42□□□□□ -0.26
LDB2-214ENST00000512345 MYH16Q9H6N6 1097 aa13.42□□□□□ -0.26
LDB2-214ENST00000512345 ASAP1Q9ULH1 1129 aa13.42□□□□□ -0.26
LDB2-214ENST00000512345 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
LDB2-214ENST00000512345 TAF1LQ8IZX4 1826 aa13.41□□□□□ -0.26
LDB2-214ENST00000512345 ZNF853P0CG23 659 aa13.41□□□□□ -0.26
LDB2-214ENST00000512345 GNAI1P63096 354 aa13.41□□□□□ -0.26
LDB2-214ENST00000512345 IFT57Q9NWB7 429 aa13.41□□□□□ -0.26
LDB2-214ENST00000512345 LAS1LQ9Y4W2 734 aaKnown RBP13.41□□□□□ -0.26
LDB2-214ENST00000512345 RNMTO43148 476 aaKnown RBP13.4□□□□□ -0.26
LDB2-214ENST00000512345 HSP90AB1P08238 724 aaKnown RBP13.4□□□□□ -0.26
LDB2-214ENST00000512345 PRKCSHP14314 528 aaPredicted RBP13.4□□□□□ -0.26
LDB2-214ENST00000512345 AMIGO3Q86WK7 504 aa13.4□□□□□ -0.26
LDB2-214ENST00000512345 PELP1Q8IZL8 1130 aaKnown RBP13.4□□□□□ -0.26
LDB2-214ENST00000512345 ZNF784Q8NCA9 323 aaPredicted RBP13.4□□□□□ -0.26
LDB2-214ENST00000512345 LINC00116Q8NCU8 138 aa13.4□□□□□ -0.26
LDB2-214ENST00000512345 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
LDB2-214ENST00000512345 ATG3Q9NT62 314 aa13.4□□□□□ -0.26
LDB2-214ENST00000512345 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.39□□□□□ -0.27
LDB2-214ENST00000512345 ERVV-2B6SEH9 535 aa13.39□□□□□ -0.27
LDB2-214ENST00000512345 PHF14O94880 888 aa13.39□□□□□ -0.27
LDB2-214ENST00000512345 SSFA2P28290 1259 aa13.39□□□□□ -0.27
LDB2-214ENST00000512345 ITPK1Q13572 414 aa13.39□□□□□ -0.27
LDB2-214ENST00000512345 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
LDB2-214ENST00000512345 CEMIPQ8WUJ3 1361 aa13.39□□□□□ -0.27
LDB2-214ENST00000512345 GOLGB1Q14789 3259 aaKnown RBP13.38□□□□□ -0.27
LDB2-214ENST00000512345 CHL1O00533 1208 aa13.38□□□□□ -0.27
LDB2-214ENST00000512345 ATP6V1AP38606 617 aa13.38□□□□□ -0.27
LDB2-214ENST00000512345 TAF7Q15545 349 aaPredicted RBP13.38□□□□□ -0.27
LDB2-214ENST00000512345 SMIM5Q71RC9 77 aa13.38□□□□□ -0.27
LDB2-214ENST00000512345 TSR2Q969E8 191 aaKnown RBP13.38□□□□□ -0.27
LDB2-214ENST00000512345 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
LDB2-214ENST00000512345 FANCIQ9NVI1 1328 aa13.38□□□□□ -0.27
LDB2-214ENST00000512345 MBIPQ9NS73 344 aa13.37□□□□□ -0.27
LDB2-214ENST00000512345 CD2APQ9Y5K6 639 aa13.37□□□□□ -0.27
LDB2-214ENST00000512345 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
LDB2-214ENST00000512345 CHD4Q14839 1912 aa13.37□□□□□ -0.27
LDB2-214ENST00000512345 UBR3Q6ZT12 1888 aa13.36□□□□□ -0.27
LDB2-214ENST00000512345 SCN11AQ9UI33 1791 aa13.36□□□□□ -0.27
LDB2-214ENST00000512345 GNPATO15228 680 aa13.36□□□□□ -0.27
LDB2-214ENST00000512345 CABP4P57796 275 aa13.36□□□□□ -0.27
LDB2-214ENST00000512345 TEFQ10587 303 aa13.36□□□□□ -0.27
LDB2-214ENST00000512345 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
LDB2-214ENST00000512345 CIZ1Q9ULV3 898 aaPredicted RBP13.36□□□□□ -0.27
LDB2-214ENST00000512345 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
LDB2-214ENST00000512345 GRIN3BO60391 1043 aa13.35□□□□□ -0.27
LDB2-214ENST00000512345 YBX3P16989 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
LDB2-214ENST00000512345 EXOSC9Q06265 439 aaKnown RBP13.35□□□□□ -0.27
LDB2-214ENST00000512345 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
LDB2-214ENST00000512345 MIS18AQ9NYP9 233 aa13.35□□□□□ -0.27
LDB2-214ENST00000512345 TSPYL4Q9UJ04 414 aa13.35□□□□□ -0.27
LDB2-214ENST00000512345 RCAN3Q9UKA8 241 aa13.34□□□□□ -0.27
LDB2-214ENST00000512345 CT47B1P0C2W7 299 aaPredicted RBP13.33□□□□□ -0.28
LDB2-214ENST00000512345 RC3H1Q5TC82 1133 aaKnown RBP13.33□□□□□ -0.28
LDB2-214ENST00000512345 SLC52A2Q9HAB3 445 aa13.33□□□□□ -0.28
LDB2-214ENST00000512345 RTCBQ9Y3I0 505 aaKnown RBP13.33□□□□□ -0.28
LDB2-214ENST00000512345 SUPT16HQ9Y5B9 1047 aaKnown RBP13.33□□□□□ -0.28
LDB2-214ENST00000512345 BTBD11A6QL63 1104 aa13.32□□□□□ -0.28
LDB2-214ENST00000512345 NFATC2IPQ8NCF5 419 aa13.32□□□□□ -0.28
LDB2-214ENST00000512345 SIPA1L3O60292 1781 aaPredicted RBP13.32□□□□□ -0.28
LDB2-214ENST00000512345 ZNF831Q5JPB2 1677 aa13.31□□□□□ -0.28
LDB2-214ENST00000512345 PRKAR2AP13861 404 aaKnown RBP13.31□□□□□ -0.28
LDB2-214ENST00000512345 TRAPPC3LQ5T215 181 aa13.31□□□□□ -0.28
LDB2-214ENST00000512345 CNTNAP4Q9C0A0 1308 aa13.31□□□□□ -0.28
LDB2-214ENST00000512345 MRC1P22897 1456 aa13.3□□□□□ -0.28
LDB2-214ENST00000512345 PTCD1O75127 700 aaKnown RBP13.3□□□□□ -0.28
LDB2-214ENST00000512345 VAMP4O75379 141 aa13.3□□□□□ -0.28
LDB2-214ENST00000512345 TSPYL6Q8N831 410 aa13.3□□□□□ -0.28
LDB2-214ENST00000512345 C8orf58Q8NAV2 365 aa13.3□□□□□ -0.28
LDB2-214ENST00000512345 TAOK2Q9UL54 1235 aa13.3□□□□□ -0.28
LDB2-214ENST00000512345 ELL2O00472 640 aaPredicted RBP13.29□□□□□ -0.28
LDB2-214ENST00000512345 RPS6KA4O75676 772 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms