RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 POLR3GLQ9BT43 218 aa14.16□□□□□ -0.14
PDLIM5-217ENST00000512274 INSRP06213 1382 aa14.16□□□□□ -0.14
PDLIM5-217ENST00000512274 KDRP35968 1356 aa14.15□□□□□ -0.14
PDLIM5-217ENST00000512274 RALBP1Q15311 655 aa14.15□□□□□ -0.14
PDLIM5-217ENST00000512274 HSPA8P11142 646 aaKnown RBP14.14□□□□□ -0.15
PDLIM5-217ENST00000512274 WBP1LQ9NX94 342 aa14.14□□□□□ -0.15
PDLIM5-217ENST00000512274 CNTNAP4Q9C0A0 1308 aa14.14□□□□□ -0.15
PDLIM5-217ENST00000512274 POLRMTO00411 1230 aaKnown RBP14.13□□□□□ -0.15
PDLIM5-217ENST00000512274 FYB1O15117 783 aa14.13□□□□□ -0.15
PDLIM5-217ENST00000512274 PHKG2P15735 406 aa14.13□□□□□ -0.15
PDLIM5-217ENST00000512274 IFNL2Q8IZJ0 200 aa14.13□□□□□ -0.15
PDLIM5-217ENST00000512274 AFDNP55196 1824 aaKnown RBP14.13□□□□□ -0.15
PDLIM5-217ENST00000512274 FLT4P35916 1363 aa14.12□□□□□ -0.15
PDLIM5-217ENST00000512274 CFAP44Q96MT7 982 aa14.12□□□□□ -0.15
PDLIM5-217ENST00000512274 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
PDLIM5-217ENST00000512274 ZNF831Q5JPB2 1677 aa14.11□□□□□ -0.15
PDLIM5-217ENST00000512274 NFKBIEO00221 500 aa14.11□□□□□ -0.15
PDLIM5-217ENST00000512274 PPM1GO15355 546 aaPredicted RBP14.11□□□□□ -0.15
PDLIM5-217ENST00000512274 CRKLP46109 303 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-217ENST00000512274 EMILIN1Q9Y6C2 1016 aa14.11□□□□□ -0.15
PDLIM5-217ENST00000512274 DICER1Q9UPY3 1922 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-217ENST00000512274 USP42Q9H9J4 1324 aaKnown RBP14.11□□□□□ -0.15
PDLIM5-217ENST00000512274 DLEC1Q9Y238 1755 aa14.1□□□□□ -0.15
PDLIM5-217ENST00000512274 PTCD1O75127 700 aaKnown RBP14.1□□□□□ -0.15
PDLIM5-217ENST00000512274 DDNO94850 711 aaPredicted RBP14.1□□□□□ -0.15
PDLIM5-217ENST00000512274 TM4SF1P30408 202 aa14.1□□□□□ -0.15
PDLIM5-217ENST00000512274 RGS19P49795 217 aa14.1□□□□□ -0.15
PDLIM5-217ENST00000512274 ERFEQ4G0M1 354 aa14.1□□□□□ -0.15
PDLIM5-217ENST00000512274 TTLL6Q8N841 843 aa14.1□□□□□ -0.15
PDLIM5-217ENST00000512274 PANK3Q9H999 370 aa14.1□□□□□ -0.15
PDLIM5-217ENST00000512274 TMEM88BA6NKF7 163 aa14.09□□□□□ -0.15
PDLIM5-217ENST00000512274 PASKQ96RG2 1323 aa14.09□□□□□ -0.15
PDLIM5-217ENST00000512274 AMER1Q5JTC6 1135 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-217ENST00000512274 USPL1Q5W0Q7 1092 aa14.08□□□□□ -0.16
PDLIM5-217ENST00000512274 C2CD5Q86YS7 1000 aa14.08□□□□□ -0.16
PDLIM5-217ENST00000512274 EYA1Q99502 592 aa14.08□□□□□ -0.16
PDLIM5-217ENST00000512274 KIF20BQ96Q89 1820 aa14.08□□□□□ -0.16
PDLIM5-217ENST00000512274 MYBBP1AQ9BQG0 1328 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-217ENST00000512274 ZPR1O75312 459 aa14.06□□□□□ -0.16
PDLIM5-217ENST00000512274 DEFB115Q30KQ5 88 aa14.06□□□□□ -0.16
PDLIM5-217ENST00000512274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.06□□□□□ -0.164e-6■■■□□ 18.5
PDLIM5-217ENST00000512274 NCAPD2Q15021 1401 aa14.06□□□□□ -0.16
PDLIM5-217ENST00000512274 ERVV-2B6SEH9 535 aa14.05□□□□□ -0.16
PDLIM5-217ENST00000512274 H0YIN7 160 aa14.05□□□□□ -0.16
PDLIM5-217ENST00000512274 C21orf2O43822 256 aa14.05□□□□□ -0.16
PDLIM5-217ENST00000512274 CABP4P57796 275 aa14.05□□□□□ -0.16
PDLIM5-217ENST00000512274 NFIXQ14938 502 aa14.05□□□□□ -0.16
PDLIM5-217ENST00000512274 EAPPQ56P03 285 aaPredicted RBP14.05□□□□□ -0.16
PDLIM5-217ENST00000512274 LDHDQ86WU2 507 aa14.05□□□□□ -0.16
PDLIM5-217ENST00000512274 ZNF622Q969S3 477 aaKnown RBP eCLIP14.05□□□□□ -0.16
PDLIM5-217ENST00000512274 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
PDLIM5-217ENST00000512274 KNSTRNQ9Y448 316 aa14.05□□□□□ -0.16
PDLIM5-217ENST00000512274 FER1L6Q2WGJ9 1857 aa14.05□□□□□ -0.16
PDLIM5-217ENST00000512274 ADAMTS7Q9UKP4 1686 aa14.04□□□□□ -0.16
PDLIM5-217ENST00000512274 TJP1Q07157 1748 aa14.04□□□□□ -0.16
PDLIM5-217ENST00000512274 ITGBL1O95965 494 aaPredicted RBP14.04□□□□□ -0.16
PDLIM5-217ENST00000512274 SERPINB2P05120 415 aa14.04□□□□□ -0.16
PDLIM5-217ENST00000512274 CENPBP07199 599 aaPredicted RBP14.04□□□□□ -0.16
PDLIM5-217ENST00000512274 MAP2K1Q02750 393 aaPredicted RBP14.04□□□□□ -0.16
PDLIM5-217ENST00000512274 WDR33Q9C0J8 1336 aaKnown RBP14.04□□□□□ -0.16
PDLIM5-217ENST00000512274 NRXN2Q9P2S2 1712 aa14.04□□□□□ -0.16
PDLIM5-217ENST00000512274 CACNA1SQ13698 1873 aa14.04□□□□□ -0.16
PDLIM5-217ENST00000512274 INTS5Q6P9B9 1019 aaKnown RBP14.03□□□□□ -0.16
PDLIM5-217ENST00000512274 TSKSQ9UJT2 592 aa14.03□□□□□ -0.16
PDLIM5-217ENST00000512274 KIF24Q5T7B8 1368 aa14.03□□□□□ -0.16
PDLIM5-217ENST00000512274 CARMIL3Q8ND23 1372 aa14.02□□□□□ -0.17
PDLIM5-217ENST00000512274 GRM1Q13255 1194 aa14.02□□□□□ -0.17
PDLIM5-217ENST00000512274 TAF1DQ9H5J8 278 aaPredicted RBP14.02□□□□□ -0.17
PDLIM5-217ENST00000512274 RASSF10A6NK89 507 aa14.01□□□□□ -0.17
PDLIM5-217ENST00000512274 BICDL1Q6ZP65 573 aa14.01□□□□□ -0.17
PDLIM5-217ENST00000512274 PAXIP1Q6ZW49 1069 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-217ENST00000512274 ABT1Q9ULW3 272 aaKnown RBP14.01□□□□□ -0.17
PDLIM5-217ENST00000512274 SCN4AP35499 1836 aa14.01□□□□□ -0.17
PDLIM5-217ENST00000512274 IQCA1LA6NCM1 817 aa14□□□□□ -0.17
PDLIM5-217ENST00000512274 CCDC24Q8N4L8 307 aa14□□□□□ -0.17
PDLIM5-217ENST00000512274 BEGAINQ9BUH8 593 aa14□□□□□ -0.17
PDLIM5-217ENST00000512274 CARD14Q9BXL6 1004 aa14□□□□□ -0.17
PDLIM5-217ENST00000512274 ANKRD31Q8N7Z5 1873 aa13.99□□□□□ -0.17
PDLIM5-217ENST00000512274 HSP90AB1P08238 724 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-217ENST00000512274 MAP1SQ66K74 1059 aaPredicted RBP13.99□□□□□ -0.17
PDLIM5-217ENST00000512274 DNAJC10Q8IXB1 793 aa13.99□□□□□ -0.17
PDLIM5-217ENST00000512274 NFATC2IPQ8NCF5 419 aa13.99□□□□□ -0.17
PDLIM5-217ENST00000512274 TAOK3Q9H2K8 898 aa13.99□□□□□ -0.17
PDLIM5-217ENST00000512274 ZNF530Q6P9A1 599 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-217ENST00000512274 CNTROBQ8N137 903 aa13.98□□□□□ -0.17
PDLIM5-217ENST00000512274 MCOLN1Q9GZU1 580 aa13.98□□□□□ -0.17
PDLIM5-217ENST00000512274 BCL2L12Q9HB09 334 aa13.98□□□□□ -0.17
PDLIM5-217ENST00000512274 MRS2Q9HD23 443 aa13.98□□□□□ -0.17
PDLIM5-217ENST00000512274 NARFQ9UHQ1 456 aa13.98□□□□□ -0.17
PDLIM5-217ENST00000512274 CASP8AP2Q9UKL3 1982 aa13.98□□□□□ -0.17
PDLIM5-217ENST00000512274 SOS1Q07889 1333 aaPredicted RBP13.97□□□□□ -0.17
PDLIM5-217ENST00000512274 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
PDLIM5-217ENST00000512274 COL11A2P13942 1736 aaPredicted RBP13.97□□□□□ -0.17
PDLIM5-217ENST00000512274 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
PDLIM5-217ENST00000512274 SLX4Q8IY92 1834 aa13.97□□□□□ -0.17
PDLIM5-217ENST00000512274 MTHFSP49914 203 aa13.96□□□□□ -0.17
PDLIM5-217ENST00000512274 FMR1Q06787 632 aaKnown RBP eCLIP13.96□□□□□ -0.17
PDLIM5-217ENST00000512274 CNGB1Q14028 1251 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-217ENST00000512274 CYP4F22Q6NT55 531 aa13.96□□□□□ -0.17
PDLIM5-217ENST00000512274 PNISRQ8TF01 805 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms