RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PUS7Q96PZ0 661 aaKnown RBP12.91□□□□□ -0.34
NUP54-211ENST00000512151 SIN3AQ96ST3 1273 aa12.91□□□□□ -0.34
NUP54-211ENST00000512151 AFDNP55196 1824 aaKnown RBP12.9□□□□□ -0.34
NUP54-211ENST00000512151 CRKLP46109 303 aaKnown RBP12.9□□□□□ -0.34
NUP54-211ENST00000512151 PPP4R3CPQ6ZMV5 832 aa12.9□□□□□ -0.34
NUP54-211ENST00000512151 EMILIN1Q9Y6C2 1016 aa12.9□□□□□ -0.34
NUP54-211ENST00000512151 PDE4DIPQ5VU43 2346 aa12.9□□□□□ -0.35
NUP54-211ENST00000512151 DDNO94850 711 aaPredicted RBP12.89□□□□□ -0.35
NUP54-211ENST00000512151 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
NUP54-211ENST00000512151 DPY19L2Q6NUT2 758 aa12.89□□□□□ -0.35
NUP54-211ENST00000512151 IFNL2Q8IZJ0 200 aa12.89□□□□□ -0.35
NUP54-211ENST00000512151 TTLL6Q8N841 843 aa12.89□□□□□ -0.35
NUP54-211ENST00000512151 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.89□□□□□ -0.356e-8■■■□□ 16.7
NUP54-211ENST00000512151 TONSLQ96HA7 1378 aa12.89□□□□□ -0.35
NUP54-211ENST00000512151 DICER1Q9UPY3 1922 aaKnown RBP12.89□□□□□ -0.35
NUP54-211ENST00000512151 TMEM88BA6NKF7 163 aa12.88□□□□□ -0.35
NUP54-211ENST00000512151 EYA1Q99502 592 aa12.88□□□□□ -0.35
NUP54-211ENST00000512151 CARD11Q9BXL7 1154 aa12.88□□□□□ -0.35
NUP54-211ENST00000512151 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
NUP54-211ENST00000512151 CARMIL3Q8ND23 1372 aa12.87□□□□□ -0.35
NUP54-211ENST00000512151 ERFEQ4G0M1 354 aa12.87□□□□□ -0.35
NUP54-211ENST00000512151 TJP1Q07157 1748 aa12.86□□□□□ -0.35
NUP54-211ENST00000512151 KIF24Q5T7B8 1368 aa12.86□□□□□ -0.35
NUP54-211ENST00000512151 RASSF10A6NK89 507 aa12.86□□□□□ -0.35
NUP54-211ENST00000512151 NFIXQ14938 502 aa12.86□□□□□ -0.35
NUP54-211ENST00000512151 USPL1Q5W0Q7 1092 aa12.86□□□□□ -0.35
NUP54-211ENST00000512151 INTS5Q6P9B9 1019 aaKnown RBP12.86□□□□□ -0.35
NUP54-211ENST00000512151 C2CD5Q86YS7 1000 aa12.86□□□□□ -0.35
NUP54-211ENST00000512151 TESK2Q96S53 571 aa12.86□□□□□ -0.35
NUP54-211ENST00000512151 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
NUP54-211ENST00000512151 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
NUP54-211ENST00000512151 LDHDQ86WU2 507 aa12.85□□□□□ -0.35
NUP54-211ENST00000512151 ZNF219Q9P2Y4 722 aaPredicted RBP12.85□□□□□ -0.35
NUP54-211ENST00000512151 FER1L6Q2WGJ9 1857 aa12.85□□□□□ -0.35
NUP54-211ENST00000512151 WDR33Q9C0J8 1336 aaKnown RBP12.85□□□□□ -0.35
NUP54-211ENST00000512151 DEFB115Q30KQ5 88 aa12.84□□□□□ -0.35
NUP54-211ENST00000512151 TAF1DQ9H5J8 278 aaPredicted RBP12.84□□□□□ -0.35
NUP54-211ENST00000512151 C21orf2O43822 256 aa12.83□□□□□ -0.36
NUP54-211ENST00000512151 MAP2K1Q02750 393 aaPredicted RBP12.83□□□□□ -0.36
NUP54-211ENST00000512151 NEUROD1Q13562 356 aa12.83□□□□□ -0.36
NUP54-211ENST00000512151 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
NUP54-211ENST00000512151 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.36
NUP54-211ENST00000512151 TNRC18O15417 2968 aaPredicted RBP12.83□□□□□ -0.36
NUP54-211ENST00000512151 ADAMTSL1Q8N6G6 1762 aa12.83□□□□□ -0.36
NUP54-211ENST00000512151 SERPINB2P05120 415 aa12.82□□□□□ -0.36
NUP54-211ENST00000512151 TSKSQ9UJT2 592 aa12.82□□□□□ -0.36
NUP54-211ENST00000512151 THSD7BQ9C0I4 1608 aa12.82□□□□□ -0.36
NUP54-211ENST00000512151 ANKRD31Q8N7Z5 1873 aa12.82□□□□□ -0.36
NUP54-211ENST00000512151 PPM1GO15355 546 aaPredicted RBP12.81□□□□□ -0.36
NUP54-211ENST00000512151 ZPR1O75312 459 aa12.81□□□□□ -0.36
NUP54-211ENST00000512151 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
NUP54-211ENST00000512151 CFAP44Q96MT7 982 aa12.81□□□□□ -0.36
NUP54-211ENST00000512151 MCOLN1Q9GZU1 580 aa12.81□□□□□ -0.36
NUP54-211ENST00000512151 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
NUP54-211ENST00000512151 COL11A2P13942 1736 aaPredicted RBP12.81□□□□□ -0.36
NUP54-211ENST00000512151 ANKRD26Q9UPS8 1709 aa12.81□□□□□ -0.36
NUP54-211ENST00000512151 SCN4AP35499 1836 aa12.81□□□□□ -0.36
NUP54-211ENST00000512151 H0YIN7 160 aa12.81□□□□□ -0.36
NUP54-211ENST00000512151 CABP4P57796 275 aa12.81□□□□□ -0.36
NUP54-211ENST00000512151 EAPPQ56P03 285 aaPredicted RBP12.81□□□□□ -0.36
NUP54-211ENST00000512151 WASHC2AQ641Q2 1341 aa12.8□□□□□ -0.36
NUP54-211ENST00000512151 LTBP3Q9NS15 1303 aa12.8□□□□□ -0.36
NUP54-211ENST00000512151 MAP1SQ66K74 1059 aaPredicted RBP12.8□□□□□ -0.36
NUP54-211ENST00000512151 DNAJC10Q8IXB1 793 aa12.8□□□□□ -0.36
NUP54-211ENST00000512151 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.36
NUP54-211ENST00000512151 LTBP1Q14766 1721 aa12.8□□□□□ -0.36
NUP54-211ENST00000512151 IQCA1LA6NCM1 817 aa12.79□□□□□ -0.36
NUP54-211ENST00000512151 FMR1Q06787 632 aaKnown RBP eCLIP12.79□□□□□ -0.36
NUP54-211ENST00000512151 CCDC24Q8N4L8 307 aa12.79□□□□□ -0.36
NUP54-211ENST00000512151 TAOK3Q9H2K8 898 aa12.79□□□□□ -0.36
NUP54-211ENST00000512151 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
NUP54-211ENST00000512151 NARFQ9UHQ1 456 aa12.79□□□□□ -0.36
NUP54-211ENST00000512151 SLX4Q8IY92 1834 aa12.78□□□□□ -0.36
NUP54-211ENST00000512151 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
NUP54-211ENST00000512151 CNTROBQ8N137 903 aa12.78□□□□□ -0.36
NUP54-211ENST00000512151 ABT1Q9ULW3 272 aaKnown RBP12.78□□□□□ -0.36
NUP54-211ENST00000512151 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
NUP54-211ENST00000512151 ZNF541Q9H0D2 1346 aa12.78□□□□□ -0.36
NUP54-211ENST00000512151 CASP8AP2Q9UKL3 1982 aa12.77□□□□□ -0.36
NUP54-211ENST00000512151 EIF4A2Q14240 407 aaKnown RBP12.77□□□□□ -0.37
NUP54-211ENST00000512151 NFATC2IPQ8NCF5 419 aa12.77□□□□□ -0.37
NUP54-211ENST00000512151 CAPNS2Q96L46 248 aa12.77□□□□□ -0.37
NUP54-211ENST00000512151 CARD14Q9BXL6 1004 aa12.77□□□□□ -0.37
NUP54-211ENST00000512151 COL15A1P39059 1388 aa12.76□□□□□ -0.37
NUP54-211ENST00000512151 HSP90AB1P08238 724 aaKnown RBP12.76□□□□□ -0.37
NUP54-211ENST00000512151 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
NUP54-211ENST00000512151 EPHX2P34913 555 aa12.76□□□□□ -0.37
NUP54-211ENST00000512151 CYP4F22Q6NT55 531 aa12.76□□□□□ -0.37
NUP54-211ENST00000512151 ZNF530Q6P9A1 599 aaPredicted RBP12.76□□□□□ -0.37
NUP54-211ENST00000512151 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
NUP54-211ENST00000512151 BICDL1Q6ZP65 573 aa12.76□□□□□ -0.37
NUP54-211ENST00000512151 AOC2O75106 756 aa12.75□□□□□ -0.37
NUP54-211ENST00000512151 GRM1Q13255 1194 aa12.75□□□□□ -0.37
NUP54-211ENST00000512151 GPR101Q96P66 508 aaPredicted RBP12.75□□□□□ -0.37
NUP54-211ENST00000512151 POLKQ9UBT6 870 aa12.75□□□□□ -0.37
NUP54-211ENST00000512151 HACL1Q9UJ83 578 aa12.75□□□□□ -0.37
NUP54-211ENST00000512151 ZBTB1Q9Y2K1 713 aa12.75□□□□□ -0.37
NUP54-211ENST00000512151 CACNA1SQ13698 1873 aa12.74□□□□□ -0.37
NUP54-211ENST00000512151 DDX21Q9NR30 783 aaKnown RBP eCLIP12.74□□□□□ -0.37
NUP54-211ENST00000512151 RNF123Q5XPI4 1314 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms