RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 DICER1Q9UPY3 1922 aaKnown RBP9.33□□□□□ -0.92
CLDND1-225ENST00000512147 CELF2O95319 508 aaKnown RBP9.33□□□□□ -0.92
CLDND1-225ENST00000512147 RFC4P35249 363 aa9.33□□□□□ -0.92
CLDND1-225ENST00000512147 MAP3K12Q12852 859 aa9.33□□□□□ -0.92
CLDND1-225ENST00000512147 MPRIPQ6WCQ1 1025 aa9.33□□□□□ -0.92
CLDND1-225ENST00000512147 BICDL1Q6ZP65 573 aa9.33□□□□□ -0.92
CLDND1-225ENST00000512147 SYNE4Q8N205 404 aa9.33□□□□□ -0.92
CLDND1-225ENST00000512147 LINC00116Q8NCU8 138 aa9.33□□□□□ -0.92
CLDND1-225ENST00000512147 UNC80Q8N2C7 3258 aa9.32□□□□□ -0.92
CLDND1-225ENST00000512147 SOX1O00570 391 aaPredicted RBP9.32□□□□□ -0.92
CLDND1-225ENST00000512147 EN2P19622 333 aaPredicted RBP9.32□□□□□ -0.92
CLDND1-225ENST00000512147 ZCRB1Q8TBF4 217 aaKnown RBP9.32□□□□□ -0.92
CLDND1-225ENST00000512147 SYMPKQ92797 1274 aaKnown RBP9.32□□□□□ -0.92
CLDND1-225ENST00000512147 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
CLDND1-225ENST00000512147 TAOK3Q9H2K8 898 aa9.32□□□□□ -0.92
CLDND1-225ENST00000512147 RNF123Q5XPI4 1314 aa9.31□□□□□ -0.92
CLDND1-225ENST00000512147 KIAA0100Q14667 2235 aaKnown RBP9.31□□□□□ -0.92
CLDND1-225ENST00000512147 A0A1W2PPC1 479 aa9.31□□□□□ -0.92
CLDND1-225ENST00000512147 GPR153Q6NV75 609 aa9.31□□□□□ -0.92
CLDND1-225ENST00000512147 CDK19Q9BWU1 502 aa9.31□□□□□ -0.92
CLDND1-225ENST00000512147 TRPM7Q96QT4 1865 aa9.31□□□□□ -0.92
CLDND1-225ENST00000512147 LTBP3Q9NS15 1303 aa9.31□□□□□ -0.92
CLDND1-225ENST00000512147 ADRA2BP18089 450 aa9.3□□□□□ -0.92
CLDND1-225ENST00000512147 ITGAEP38570 1179 aa9.3□□□□□ -0.92
CLDND1-225ENST00000512147 KIF23Q02241 960 aaPredicted RBP9.3□□□□□ -0.92
CLDND1-225ENST00000512147 INSRP06213 1382 aa9.29□□□□□ -0.92
CLDND1-225ENST00000512147 LOC102724428A0A0B4J2F2 783 aa9.29□□□□□ -0.92
CLDND1-225ENST00000512147 C21orf2O43822 256 aa9.29□□□□□ -0.92
CLDND1-225ENST00000512147 SIK1P57059 783 aa9.29□□□□□ -0.92
CLDND1-225ENST00000512147 ANKRD24Q8TF21 1146 aa9.29□□□□□ -0.92
CLDND1-225ENST00000512147 ZNF296Q8WUU4 475 aaPredicted RBP9.29□□□□□ -0.92
CLDND1-225ENST00000512147 MKI67P46013 3256 aaKnown RBP9.28□□□□□ -0.92
CLDND1-225ENST00000512147 CCDC102AQ96A19 550 aa9.28□□□□□ -0.92
CLDND1-225ENST00000512147 MTMR10Q9NXD2 777 aa9.28□□□□□ -0.92
CLDND1-225ENST00000512147 ARIH1Q9Y4X5 557 aaPredicted RBP9.28□□□□□ -0.92
CLDND1-225ENST00000512147 H0YIN7 160 aa9.27□□□□□ -0.93
CLDND1-225ENST00000512147 TNFRSF10AO00220 468 aa9.27□□□□□ -0.93
CLDND1-225ENST00000512147 LMOD1P29536 600 aaPredicted RBP9.27□□□□□ -0.93
CLDND1-225ENST00000512147 ATP6V1AP38606 617 aa9.27□□□□□ -0.93
CLDND1-225ENST00000512147 DDR1Q08345 913 aa9.27□□□□□ -0.93
CLDND1-225ENST00000512147 TRIM26Q12899 539 aaPredicted RBP9.27□□□□□ -0.93
CLDND1-225ENST00000512147 PRO3102Q9H379 93 aa9.27□□□□□ -0.93
CLDND1-225ENST00000512147 ZNF408Q9H9D4 720 aa9.27□□□□□ -0.93
CLDND1-225ENST00000512147 ROCK1Q13464 1354 aa9.26□□□□□ -0.93
CLDND1-225ENST00000512147 CACNA1GO43497 2377 aa9.26□□□□□ -0.93
CLDND1-225ENST00000512147 HUNKP57058 714 aa9.26□□□□□ -0.93
CLDND1-225ENST00000512147 Q7L0L9 218 aa9.26□□□□□ -0.93
CLDND1-225ENST00000512147 C2CD5Q86YS7 1000 aa9.26□□□□□ -0.93
CLDND1-225ENST00000512147 DPF3Q92784 378 aa9.26□□□□□ -0.93
CLDND1-225ENST00000512147 TMEM106CQ9BVX2 250 aa9.26□□□□□ -0.93
CLDND1-225ENST00000512147 AKAP11Q9UKA4 1901 aa9.26□□□□□ -0.93
CLDND1-225ENST00000512147 PKD1L2Q7Z442 2459 aa9.26□□□□□ -0.93
CLDND1-225ENST00000512147 ZNF541Q9H0D2 1346 aa9.26□□□□□ -0.93
CLDND1-225ENST00000512147 RANBP2P49792 3224 aaKnown RBP9.25□□□□□ -0.93
CLDND1-225ENST00000512147 ITPK1Q13572 414 aa9.25□□□□□ -0.93
CLDND1-225ENST00000512147 RGMBQ6NW40 437 aa9.25□□□□□ -0.93
CLDND1-225ENST00000512147 REM2Q8IYK8 340 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-225ENST00000512147 GPC2Q8N158 579 aa9.25□□□□□ -0.93
CLDND1-225ENST00000512147 CSRNP1Q96S65 589 aa9.25□□□□□ -0.93
CLDND1-225ENST00000512147 PAPPA2Q9BXP8 1791 aa9.24□□□□□ -0.93
CLDND1-225ENST00000512147 FAM155AB1AL88 458 aaPredicted RBP9.24□□□□□ -0.93
CLDND1-225ENST00000512147 POLRMTO00411 1230 aaKnown RBP9.24□□□□□ -0.93
CLDND1-225ENST00000512147 FKBP8Q14318 412 aa9.24□□□□□ -0.93
CLDND1-225ENST00000512147 USP50Q70EL3 339 aaPredicted RBP9.24□□□□□ -0.93
CLDND1-225ENST00000512147 ALYREFQ86V81 257 aaKnown RBP9.24□□□□□ -0.93
CLDND1-225ENST00000512147 P2RX7Q99572 595 aaKnown RBP9.24□□□□□ -0.93
CLDND1-225ENST00000512147 LAMB4A4D0S4 1761 aa9.24□□□□□ -0.93
CLDND1-225ENST00000512147 SRPK2P78362 688 aaKnown RBP9.23□□□□□ -0.93
CLDND1-225ENST00000512147 ZNF622Q969S3 477 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLDND1-225ENST00000512147 TTC21AQ8NDW8 1320 aa9.23□□□□□ -0.93
CLDND1-225ENST00000512147 VCANP13611 3396 aa9.22□□□□□ -0.93
CLDND1-225ENST00000512147 RPS6KA4O75676 772 aa9.22□□□□□ -0.93
CLDND1-225ENST00000512147 TBC1D8O95759 1140 aa9.22□□□□□ -0.93
CLDND1-225ENST00000512147 ZNF157P51786 506 aaPredicted RBP9.22□□□□□ -0.93
CLDND1-225ENST00000512147 SOGA3Q5TF21 947 aa9.22□□□□□ -0.93
CLDND1-225ENST00000512147 SMG6Q86US8 1419 aaKnown RBP9.22□□□□□ -0.93
CLDND1-225ENST00000512147 FER1L6Q2WGJ9 1857 aa9.21□□□□□ -0.93
CLDND1-225ENST00000512147 PIGBQ92521 554 aa9.21□□□□□ -0.94
CLDND1-225ENST00000512147 HCN4Q9Y3Q4 1203 aa9.21□□□□□ -0.94
CLDND1-225ENST00000512147 RPTORQ8N122 1335 aa9.21□□□□□ -0.94
CLDND1-225ENST00000512147 RBBP6Q7Z6E9 1792 aaKnown RBP9.21□□□□□ -0.94
CLDND1-225ENST00000512147 USP31Q70CQ4 1352 aa9.21□□□□□ -0.94
CLDND1-225ENST00000512147 SCN11AQ9UI33 1791 aa9.2□□□□□ -0.94
CLDND1-225ENST00000512147 GPR25O00155 361 aa9.2□□□□□ -0.94
CLDND1-225ENST00000512147 TM4SF1P30408 202 aa9.2□□□□□ -0.94
CLDND1-225ENST00000512147 NOM1Q5C9Z4 860 aaKnown RBP9.2□□□□□ -0.94
CLDND1-225ENST00000512147 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
CLDND1-225ENST00000512147 NR2E3Q9Y5X4 410 aa9.2□□□□□ -0.94
CLDND1-225ENST00000512147 FKTNO75072 461 aa9.19□□□□□ -0.94
CLDND1-225ENST00000512147 EPS15P42566 896 aa9.19□□□□□ -0.94
CLDND1-225ENST00000512147 COL26A1Q96A83 441 aa9.19□□□□□ -0.94
CLDND1-225ENST00000512147 GLIS2Q9BZE0 524 aaPredicted RBP9.19□□□□□ -0.94
CLDND1-225ENST00000512147 SRP68Q9UHB9 627 aaKnown RBP9.19□□□□□ -0.94
CLDND1-225ENST00000512147 GJA3Q9Y6H8 435 aa9.19□□□□□ -0.94
CLDND1-225ENST00000512147 LTV1Q96GA3 475 aaPredicted RBP9.18□□□□□ -0.94
CLDND1-225ENST00000512147 PCGF6Q9BYE7 350 aa9.18□□□□□ -0.94
CLDND1-225ENST00000512147 DLEC1Q9Y238 1755 aa9.18□□□□□ -0.94
CLDND1-225ENST00000512147 SPTBN5Q9NRC6 3674 aaKnown RBP9.17□□□□□ -0.94
CLDND1-225ENST00000512147 NFAT5O94916 1531 aa9.17□□□□□ -0.94
CLDND1-225ENST00000512147 USP42Q9H9J4 1324 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms