RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 CHRNA2Q15822 529 aa18.32■□□□□ 0.52
SNCAIP-216ENST00000512146 PROSER3Q2NL68 480 aa18.32■□□□□ 0.52
SNCAIP-216ENST00000512146 KSR2Q6VAB6 950 aa18.32■□□□□ 0.52
SNCAIP-216ENST00000512146 DDX21Q9NR30 783 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNCAIP-216ENST00000512146 SCN11AQ9UI33 1791 aa18.31■□□□□ 0.52
SNCAIP-216ENST00000512146 RAB11FIP3O75154 756 aa18.31■□□□□ 0.52
SNCAIP-216ENST00000512146 ANXA1P04083 346 aa18.31■□□□□ 0.52
SNCAIP-216ENST00000512146 CSB-PGBD3P0DP91 1061 aa18.31■□□□□ 0.52
SNCAIP-216ENST00000512146 HSCBQ8IWL3 235 aa18.31■□□□□ 0.52
SNCAIP-216ENST00000512146 DCAF5Q96JK2 942 aa18.31■□□□□ 0.52
SNCAIP-216ENST00000512146 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
SNCAIP-216ENST00000512146 NBPF7P0C2Y1 421 aaPredicted RBP18.3■□□□□ 0.52
SNCAIP-216ENST00000512146 MTX1Q13505 466 aa18.3■□□□□ 0.52
SNCAIP-216ENST00000512146 PDIA6Q15084 440 aa18.3■□□□□ 0.52
SNCAIP-216ENST00000512146 PPP1R42Q7Z4L9 355 aa18.3■□□□□ 0.52
SNCAIP-216ENST00000512146 SLAIN2Q9P270 581 aa18.3■□□□□ 0.52
SNCAIP-216ENST00000512146 PKD1L3Q7Z443 1732 aa18.3■□□□□ 0.52
SNCAIP-216ENST00000512146 AOX1Q06278 1338 aa18.3■□□□□ 0.52
SNCAIP-216ENST00000512146 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
SNCAIP-216ENST00000512146 CYP27B1O15528 508 aa18.3■□□□□ 0.52
SNCAIP-216ENST00000512146 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
SNCAIP-216ENST00000512146 USP26Q9BXU7 913 aa18.3■□□□□ 0.52
SNCAIP-216ENST00000512146 HSP90AB1P08238 724 aaKnown RBP18.29■□□□□ 0.52
SNCAIP-216ENST00000512146 CASC1Q6TDU7 716 aa18.29■□□□□ 0.52
SNCAIP-216ENST00000512146 MX1P20591 662 aa18.28■□□□□ 0.52
SNCAIP-216ENST00000512146 NFATC2IPQ8NCF5 419 aa18.28■□□□□ 0.52
SNCAIP-216ENST00000512146 MAP3K2Q9Y2U5 619 aa18.28■□□□□ 0.52
SNCAIP-216ENST00000512146 DDIT3P35638 169 aa18.28■□□□□ 0.52
SNCAIP-216ENST00000512146 UTYO14607 1347 aa18.27■□□□□ 0.52
SNCAIP-216ENST00000512146 ZNF335Q9H4Z2 1342 aaPredicted RBP18.27■□□□□ 0.52
SNCAIP-216ENST00000512146 LINS1Q8NG48 757 aa18.27■□□□□ 0.52
SNCAIP-216ENST00000512146 HDAC5Q9UQL6 1122 aa18.27■□□□□ 0.52
SNCAIP-216ENST00000512146 WDR17Q8IZU2 1322 aa18.27■□□□□ 0.51
SNCAIP-216ENST00000512146 SLC39A6Q13433 755 aa18.26■□□□□ 0.51
SNCAIP-216ENST00000512146 SRGAP3O43295 1099 aa18.26■□□□□ 0.51
SNCAIP-216ENST00000512146 DDX58O95786 925 aaKnown RBP18.26■□□□□ 0.51
SNCAIP-216ENST00000512146 CHMP5Q9NZZ3 219 aa18.26■□□□□ 0.51
SNCAIP-216ENST00000512146 REC8O95072 547 aa18.25■□□□□ 0.51
SNCAIP-216ENST00000512146 ZNF496Q96IT1 587 aaPredicted RBP18.25■□□□□ 0.51
SNCAIP-216ENST00000512146 SURF6O75683 361 aaKnown RBP18.24■□□□□ 0.51
SNCAIP-216ENST00000512146 HSP90AB4PQ58FF6 505 aa18.24■□□□□ 0.51
SNCAIP-216ENST00000512146 LRP10Q7Z4F1 713 aa18.24■□□□□ 0.51
SNCAIP-216ENST00000512146 RHPN1Q8TCX5 695 aa18.24■□□□□ 0.51
SNCAIP-216ENST00000512146 KIF1BPQ96EK5 621 aa18.24■□□□□ 0.51
SNCAIP-216ENST00000512146 BCL11AQ9H165 835 aa18.24■□□□□ 0.51
SNCAIP-216ENST00000512146 PARP4Q9UKK3 1724 aaKnown RBP18.24■□□□□ 0.51
SNCAIP-216ENST00000512146 ERC2O15083 957 aa18.23■□□□□ 0.51
SNCAIP-216ENST00000512146 RABEP1Q15276 862 aa18.23■□□□□ 0.51
SNCAIP-216ENST00000512146 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
SNCAIP-216ENST00000512146 COL5A2P05997 1499 aaPredicted RBP18.23■□□□□ 0.51
SNCAIP-216ENST00000512146 TUBGCP6Q96RT7 1819 aa18.23■□□□□ 0.51
SNCAIP-216ENST00000512146 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
SNCAIP-216ENST00000512146 CD2BP2O95400 341 aaKnown RBP18.22■□□□□ 0.51
SNCAIP-216ENST00000512146 C5P01031 1676 aa18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 K7ELQ4 463 aaPredicted RBP18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 GRM8O00222 908 aa18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 FMNL2Q96PY5 1086 aa18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 RBM42Q9BTD8 480 aaKnown RBP18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 C9orf78Q9NZ63 289 aaPredicted RBP18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 CIZ1Q9ULV3 898 aaPredicted RBP18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 USP42Q9H9J4 1324 aaKnown RBP18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 NKX1-1Q15270 411 aaPredicted RBP18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 CWF19L2Q2TBE0 894 aaKnown RBP18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 TSHZ3Q63HK5 1081 aa18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 LARP1Q6PKG0 1096 aaKnown RBP18.21■□□□□ 0.51
SNCAIP-216ENST00000512146 TTC5Q8N0Z6 440 aa18.2■□□□□ 0.5
SNCAIP-216ENST00000512146 CARD10Q9BWT7 1032 aa18.2■□□□□ 0.5
SNCAIP-216ENST00000512146 IL1RAPL2Q9NP60 686 aa18.2■□□□□ 0.5
SNCAIP-216ENST00000512146 PCDH11XQ9BZA7 1347 aa18.2■□□□□ 0.5
SNCAIP-216ENST00000512146 PCDH11YQ9BZA8 1340 aa18.2■□□□□ 0.5
SNCAIP-216ENST00000512146 GLI3P10071 1580 aa18.19■□□□□ 0.5
SNCAIP-216ENST00000512146 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
SNCAIP-216ENST00000512146 CHMLP26374 656 aa18.19■□□□□ 0.5
SNCAIP-216ENST00000512146 CABP4P57796 275 aa18.19■□□□□ 0.5
SNCAIP-216ENST00000512146 SPRYD3Q8NCJ5 442 aa18.19■□□□□ 0.5
SNCAIP-216ENST00000512146 ZCRB1Q8TBF4 217 aaKnown RBP18.19■□□□□ 0.5
SNCAIP-216ENST00000512146 KAZALD1Q96I82 304 aa18.19■□□□□ 0.5
SNCAIP-216ENST00000512146 ESYT1Q9BSJ8 1104 aa18.19■□□□□ 0.5
SNCAIP-216ENST00000512146 GSE1Q14687 1217 aa18.19■□□□□ 0.5
SNCAIP-216ENST00000512146 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
SNCAIP-216ENST00000512146 USP16Q9Y5T5 823 aa18.19■□□□□ 0.5
SNCAIP-216ENST00000512146 ERVV-2B6SEH9 535 aa18.18■□□□□ 0.5
SNCAIP-216ENST00000512146 EPB41L2O43491 1005 aaKnown RBP18.18■□□□□ 0.5
SNCAIP-216ENST00000512146 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
SNCAIP-216ENST00000512146 XAGE3Q8WTP9 111 aa18.18■□□□□ 0.5
SNCAIP-216ENST00000512146 IL17RAQ96F46 866 aa18.18■□□□□ 0.5
SNCAIP-216ENST00000512146 METTL22Q9BUU2 404 aaPredicted RBP18.18■□□□□ 0.5
SNCAIP-216ENST00000512146 AIMP1Q12904 312 aaKnown RBP18.17■□□□□ 0.5
SNCAIP-216ENST00000512146 COPS6Q7L5N1 327 aa18.17■□□□□ 0.5
SNCAIP-216ENST00000512146 RIC3Q7Z5B4 369 aa18.17■□□□□ 0.5
SNCAIP-216ENST00000512146 ABCA3Q99758 1704 aa18.17■□□□□ 0.5
SNCAIP-216ENST00000512146 NHSL1Q5SYE7 1610 aa18.17■□□□□ 0.5
SNCAIP-216ENST00000512146 ERBB4Q15303 1308 aa18.16■□□□□ 0.5
SNCAIP-216ENST00000512146 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
SNCAIP-216ENST00000512146 NUTM1Q86Y26 1132 aa18.16■□□□□ 0.5
SNCAIP-216ENST00000512146 ERC1Q8IUD2 1116 aa18.16■□□□□ 0.5
SNCAIP-216ENST00000512146 SUCLG2Q96I99 432 aa18.16■□□□□ 0.5
SNCAIP-216ENST00000512146 UNC5CLQ8IV45 518 aa18.16■□□□□ 0.5
SNCAIP-216ENST00000512146 COL15A1P39059 1388 aa18.15■□□□□ 0.5
SNCAIP-216ENST00000512146 TTC41PQ6P2S7 1318 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms