RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 IFNL1Q8IU54 200 aa7.91□□□□□ -1.14
RNF4-217ENST00000511892 LINC00116Q8NCU8 138 aa7.91□□□□□ -1.14
RNF4-217ENST00000511892 DCAF5Q96JK2 942 aa7.91□□□□□ -1.14
RNF4-217ENST00000511892 TJP1Q07157 1748 aa7.91□□□□□ -1.14
RNF4-217ENST00000511892 SIPA1L3O60292 1781 aaPredicted RBP7.91□□□□□ -1.14
RNF4-217ENST00000511892 C4AP0C0L4 1744 aa7.9□□□□□ -1.14
RNF4-217ENST00000511892 CICQ96RK0 1608 aaPredicted RBP7.9□□□□□ -1.14
RNF4-217ENST00000511892 MAP3K5Q99683 1374 aa7.9□□□□□ -1.14
RNF4-217ENST00000511892 ITPK1Q13572 414 aa7.9□□□□□ -1.14
RNF4-217ENST00000511892 CNGB1Q14028 1251 aaPredicted RBP7.9□□□□□ -1.14
RNF4-217ENST00000511892 SMIM5Q71RC9 77 aa7.9□□□□□ -1.14
RNF4-217ENST00000511892 SLC4A9Q96Q91 983 aa7.9□□□□□ -1.14
RNF4-217ENST00000511892 DIAPH1O60610 1272 aaKnown RBP7.89□□□□□ -1.15
RNF4-217ENST00000511892 HSP90AB1P08238 724 aaKnown RBP7.89□□□□□ -1.15
RNF4-217ENST00000511892 HMOX1P09601 288 aa7.89□□□□□ -1.15
RNF4-217ENST00000511892 ATP6V1AP38606 617 aa7.89□□□□□ -1.15
RNF4-217ENST00000511892 TMEM106CQ9BVX2 250 aa7.89□□□□□ -1.15
RNF4-217ENST00000511892 UBR2Q8IWV8 1755 aa7.89□□□□□ -1.15
RNF4-217ENST00000511892 KIF13BQ9NQT8 1826 aa7.88□□□□□ -1.15
RNF4-217ENST00000511892 POLD1P28340 1107 aa7.88□□□□□ -1.15
RNF4-217ENST00000511892 DCAF8Q5TAQ9 597 aa7.88□□□□□ -1.15
RNF4-217ENST00000511892 MSL1Q68DK7 614 aa7.88□□□□□ -1.15
RNF4-217ENST00000511892 AK7Q96M32 723 aa7.88□□□□□ -1.15
RNF4-217ENST00000511892 DLG5Q8TDM6 1919 aa7.88□□□□□ -1.15
RNF4-217ENST00000511892 MRC1P22897 1456 aa7.87□□□□□ -1.15
RNF4-217ENST00000511892 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.87□□□□□ -1.15
RNF4-217ENST00000511892 HMGB2P26583 209 aaKnown RBP7.87□□□□□ -1.15
RNF4-217ENST00000511892 CABP4P57796 275 aa7.87□□□□□ -1.15
RNF4-217ENST00000511892 MTHFSDQ2M296 383 aaKnown RBP7.87□□□□□ -1.15
RNF4-217ENST00000511892 AKAP4Q5JQC9 854 aa7.87□□□□□ -1.15
RNF4-217ENST00000511892 C1orf141Q5JVX7 400 aa7.87□□□□□ -1.15
RNF4-217ENST00000511892 NFATC2IPQ8NCF5 419 aa7.87□□□□□ -1.15
RNF4-217ENST00000511892 FLAD1Q8NFF5 587 aa7.87□□□□□ -1.15
RNF4-217ENST00000511892 NLGN2Q8NFZ4 835 aa7.87□□□□□ -1.15
RNF4-217ENST00000511892 FAM212AQ96EL1 285 aa7.87□□□□□ -1.15
RNF4-217ENST00000511892 LGR6Q9HBX8 967 aa7.87□□□□□ -1.15
RNF4-217ENST00000511892 ZBTB47Q9UFB7 747 aaPredicted RBP7.87□□□□□ -1.15
RNF4-217ENST00000511892 KIAA1551Q9HCM1 1747 aa7.86□□□□□ -1.15
RNF4-217ENST00000511892 GNPATO15228 680 aa7.86□□□□□ -1.15
RNF4-217ENST00000511892 PHF14O94880 888 aa7.86□□□□□ -1.15
RNF4-217ENST00000511892 YY1P25490 414 aa7.86□□□□□ -1.15
RNF4-217ENST00000511892 SSFA2P28290 1259 aa7.86□□□□□ -1.15
RNF4-217ENST00000511892 SLAIN1Q8ND83 568 aa7.86□□□□□ -1.15
RNF4-217ENST00000511892 PCDH10Q9P2E7 1040 aa7.86□□□□□ -1.15
RNF4-217ENST00000511892 KCPQ6ZWJ8 1503 aa7.86□□□□□ -1.15
RNF4-217ENST00000511892 N4BP2Q86UW6 1770 aaPredicted RBP7.86□□□□□ -1.15
RNF4-217ENST00000511892 BRCA1P38398 1863 aaKnown RBP7.85□□□□□ -1.15
RNF4-217ENST00000511892 RNMTO43148 476 aaKnown RBP7.85□□□□□ -1.15
RNF4-217ENST00000511892 PTCD1O75127 700 aaKnown RBP7.85□□□□□ -1.15
RNF4-217ENST00000511892 PYGBP11216 843 aa7.85□□□□□ -1.15
RNF4-217ENST00000511892 PPP2R1AP30153 589 aa7.85□□□□□ -1.15
RNF4-217ENST00000511892 KLHL34Q8N239 644 aa7.85□□□□□ -1.15
RNF4-217ENST00000511892 SLC52A2Q9HAB3 445 aa7.85□□□□□ -1.15
RNF4-217ENST00000511892 CNTNAP4Q9C0A0 1308 aa7.84□□□□□ -1.15
RNF4-217ENST00000511892 U2SURPO15042 1029 aaKnown RBP7.84□□□□□ -1.15
RNF4-217ENST00000511892 RC3H1Q5TC82 1133 aaKnown RBP7.84□□□□□ -1.15
RNF4-217ENST00000511892 AFDNP55196 1824 aaKnown RBP7.84□□□□□ -1.15
RNF4-217ENST00000511892 RPS6KA4O75676 772 aa7.83□□□□□ -1.16
RNF4-217ENST00000511892 PLCG2P16885 1265 aa7.83□□□□□ -1.16
RNF4-217ENST00000511892 SLC39A6Q13433 755 aa7.83□□□□□ -1.16
RNF4-217ENST00000511892 GPR162Q16538 588 aa7.83□□□□□ -1.16
RNF4-217ENST00000511892 TRAPPC3LQ5T215 181 aa7.83□□□□□ -1.16
RNF4-217ENST00000511892 IL17REQ8NFR9 667 aa7.83□□□□□ -1.16
RNF4-217ENST00000511892 ARHGEF1Q92888 912 aaKnown RBP7.83□□□□□ -1.16
RNF4-217ENST00000511892 PHACTR3Q96KR7 559 aa7.83□□□□□ -1.16
RNF4-217ENST00000511892 RSPH6AQ9H0K4 717 aa7.83□□□□□ -1.16
RNF4-217ENST00000511892 RTCBQ9Y3I0 505 aaKnown RBP7.83□□□□□ -1.16
RNF4-217ENST00000511892 YBX3P16989 372 aaKnown RBP eCLIP7.82□□□□□ -1.16
RNF4-217ENST00000511892 CRKLP46109 303 aaKnown RBP7.82□□□□□ -1.16
RNF4-217ENST00000511892 IER5LQ5T953 404 aa7.82□□□□□ -1.16
RNF4-217ENST00000511892 INTS5Q6P9B9 1019 aaKnown RBP7.82□□□□□ -1.16
RNF4-217ENST00000511892 DNAJC10Q8IXB1 793 aa7.82□□□□□ -1.16
RNF4-217ENST00000511892 PCDHB8Q9UN66 801 aa7.82□□□□□ -1.16
RNF4-217ENST00000511892 CD2APQ9Y5K6 639 aa7.82□□□□□ -1.16
RNF4-217ENST00000511892 ARFGEF1Q9Y6D6 1849 aa7.81□□□□□ -1.16
RNF4-217ENST00000511892 ZNF316A6NFI3 1004 aaPredicted RBP7.81□□□□□ -1.16
RNF4-217ENST00000511892 MMP10P09238 476 aa7.81□□□□□ -1.16
RNF4-217ENST00000511892 GYS1P13807 737 aa7.81□□□□□ -1.16
RNF4-217ENST00000511892 PRKAR2BP31323 418 aa7.81□□□□□ -1.16
RNF4-217ENST00000511892 CDAN1Q8IWY9 1227 aa7.81□□□□□ -1.16
RNF4-217ENST00000511892 GAS2L2Q8NHY3 880 aa7.81□□□□□ -1.16
RNF4-217ENST00000511892 CFAP53Q96M91 514 aa7.81□□□□□ -1.16
RNF4-217ENST00000511892 CEMIPQ8WUJ3 1361 aa7.81□□□□□ -1.16
RNF4-217ENST00000511892 GNAT3A8MTJ3 354 aa7.8□□□□□ -1.16
RNF4-217ENST00000511892 CYP19A1P11511 503 aaPredicted RBP7.8□□□□□ -1.16
RNF4-217ENST00000511892 RFC4P35249 363 aa7.8□□□□□ -1.16
RNF4-217ENST00000511892 NRXN2Q9P2S2 1712 aa7.8□□□□□ -1.16
RNF4-217ENST00000511892 SOS1Q07889 1333 aaPredicted RBP7.79□□□□□ -1.16
RNF4-217ENST00000511892 KDM3BQ7LBC6 1761 aa7.79□□□□□ -1.16
RNF4-217ENST00000511892 ST18O60284 1047 aa7.79□□□□□ -1.16
RNF4-217ENST00000511892 FCHSD2O94868 740 aa7.79□□□□□ -1.16
RNF4-217ENST00000511892 U2AF1L5P0DN76 240 aaPredicted RBP7.79□□□□□ -1.16
RNF4-217ENST00000511892 U2AF1Q01081 240 aaKnown RBP eCLIP7.79□□□□□ -1.16
RNF4-217ENST00000511892 VSIG10Q8N0Z9 540 aa7.79□□□□□ -1.16
RNF4-217ENST00000511892 NLGN1Q8N2Q7 840 aa7.79□□□□□ -1.16
RNF4-217ENST00000511892 ZNF784Q8NCA9 323 aaPredicted RBP7.79□□□□□ -1.16
RNF4-217ENST00000511892 CCDC87Q9NVE4 849 aa7.79□□□□□ -1.16
RNF4-217ENST00000511892 SRP68Q9UHB9 627 aaKnown RBP7.79□□□□□ -1.16
RNF4-217ENST00000511892 NUDCQ9Y266 331 aa7.79□□□□□ -1.16
RNF4-217ENST00000511892 DLEC1Q9Y238 1755 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms